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The map label for this gene is yadH [H]

Identifier: 134301514

GI number: 134301514

Start: 431324

End: 432103

Strand: Reverse

Name: yadH [H]

Synonym: FTW_0436

Alternate gene names: 134301514

Gene position: 432103-431324 (Counterclockwise)

Preceding gene: 134301515

Following gene: 134301512

Centisome position: 22.76

GC content: 32.44

Gene sequence:

>780_bases
ATGAATTTAAGAGATTATTGGATAACATACGTAACAATTTTTAATCGTGAGTGTAAAAGGGTTTTTAGAATTTGGCCACA
GACTTTACTTCCATCAGTGATAACTATAGTTTTATATTTTCTGATTTTTGGTAAGGTTGTCGGATCACGTATAGGCAGTA
TGGGAGATGGAGTTACTTATATGCAGTATATTACTCCGGGTCTTATAATTATGGCGGTGATTCAAAACTCATATGGTAAT
GTTGTCAGCTCGTTCTTTGGTATACGTTTTAGTAAAGCTATAGAAGAGTTATTAGTATCACCTGTTAGTAATCATCTTAT
AGTGCTAGGATATATTTCCGGTGGTATATTTAGAGGTTTCATTGTTGGGATGTTTGTTAGTGTTGCGGCATTTTTATTAG
GCGGCTTCGCTACTATACACAATGTACCATTGGTTTTAGCTGGGTTTATATTTTGTGGTGCTTTATTCTCTCTTGGCGGT
TTGATAAATGCAATATTTTCACAAAAGTTCGATGATACTACGATATTTCCTACATTTATACTTACACCGCTTATCTATTT
AGGTGGAGTGTTTTATAATATAAATAATTTAACTGGATTTTGGCACTTTATCTCATCTTGTAATCCACTATTTTATATAG
TTGATTTTGTTAGATATGGTTTCATAGGCGTATCTACAGTTAATCCATACTTTGCATTTGCAGCAATAGTTATTTTCACA
TTTGTATTGTACTATCTATGTTGGTATTTACTTGAGAAAGGTATTAGATTGAAAGCTTAG

Upstream 100 bases:

>100_bases
TAAGTAGCAAGTATGATTTGGATGTTTTGGATGTGCGTTCAAAAGCAGCTAAGTTAGAGAAGTTATTTATTGAAGTAGCA
AGAAATAAATAGGTAAATTT

Downstream 100 bases:

>100_bases
AGATTATTCTTTTGCTCTATGTACTTGACGGATAATGTACAGTGGTCTGTGCTTTGTTTCGATAAATATTCTGCCTATAT
AACTACCTAGCATTCCGATT

Product: ABC-2 type transporter, membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 259; Mature: 259

Protein sequence:

>259_residues
MNLRDYWITYVTIFNRECKRVFRIWPQTLLPSVITIVLYFLIFGKVVGSRIGSMGDGVTYMQYITPGLIIMAVIQNSYGN
VVSSFFGIRFSKAIEELLVSPVSNHLIVLGYISGGIFRGFIVGMFVSVAAFLLGGFATIHNVPLVLAGFIFCGALFSLGG
LINAIFSQKFDDTTIFPTFILTPLIYLGGVFYNINNLTGFWHFISSCNPLFYIVDFVRYGFIGVSTVNPYFAFAAIVIFT
FVLYYLCWYLLEKGIRLKA

Sequences:

>Translated_259_residues
MNLRDYWITYVTIFNRECKRVFRIWPQTLLPSVITIVLYFLIFGKVVGSRIGSMGDGVTYMQYITPGLIIMAVIQNSYGN
VVSSFFGIRFSKAIEELLVSPVSNHLIVLGYISGGIFRGFIVGMFVSVAAFLLGGFATIHNVPLVLAGFIFCGALFSLGG
LINAIFSQKFDDTTIFPTFILTPLIYLGGVFYNINNLTGFWHFISSCNPLFYIVDFVRYGFIGVSTVNPYFAFAAIVIFT
FVLYYLCWYLLEKGIRLKA
>Mature_259_residues
MNLRDYWITYVTIFNRECKRVFRIWPQTLLPSVITIVLYFLIFGKVVGSRIGSMGDGVTYMQYITPGLIIMAVIQNSYGN
VVSSFFGIRFSKAIEELLVSPVSNHLIVLGYISGGIFRGFIVGMFVSVAAFLLGGFATIHNVPLVLAGFIFCGALFSLGG
LINAIFSQKFDDTTIFPTFILTPLIYLGGVFYNINNLTGFWHFISSCNPLFYIVDFVRYGFIGVSTVNPYFAFAAIVIFT
FVLYYLCWYLLEKGIRLKA

Specific function: Unknown

COG id: COG0842

COG function: function code V; ABC-type multidrug transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-2 domain [H]

Homologues:

Organism=Escherichia coli, GI1786320, Length=254, Percent_Identity=46.4566929133858, Blast_Score=241, Evalue=2e-65,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000412
- InterPro:   IPR013526
- InterPro:   IPR013525 [H]

Pfam domain/function: PF01061 ABC2_membrane [H]

EC number: NA

Molecular weight: Translated: 29111; Mature: 29111

Theoretical pI: Translated: 9.21; Mature: 9.21

Prosite motif: PS51012 ABC_TM2 ; PS00213 LIPOCALIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure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HHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]