Click here to switch to the map view.

The map label for this gene is 134300439

Identifier: 134300439

GI number: 134300439

Start: 2826143

End: 2826928

Strand: Reverse

Name: 134300439

Synonym: Dred_2600

Alternate gene names: NA

Gene position: 2826928-2826143 (Counterclockwise)

Preceding gene: 134300440

Following gene: 134300438

Centisome position: 78.35

GC content: 46.69

Gene sequence:

>786_bases
ATGGCATACATCGGACTAAAACATCCGGTCTTTGCGCCGATTGTATCGGAACCGGCTAATGGTCTACCAACCTATGGAAC
CGGGCTAGTTGTAGGTCGTGCAATTGCTGCAAACGTCTCAATCGAGCTATCTGATAGCAAATTACCAGCTGACGATACAA
TCGTTGAGATTGATAACAGTTTTATTTCCGGAACAATTACAACTGGTATTGATGACCTTTCGGATGAGGCGTTAAAAATT
TGGCTAGGGCAGCAAGCTGCTACTTTGAATGGAGTGGCTACTATCAGATCAGCTGCAAGCTATGAAGCACCCAATGGAGG
TTTTGGTTATTACCGGGTCCGGAAAAAGAATGGTGTACGCTCATACAGGGCCTACTGGTATTACAAAACCAAATGGGGTA
TGCCATCCGAAGATGCTTCCACAAAACCAGATGGAGCTATTGAGTGGCAAACACCGGAAGTGCAAGGCACTATCATGGCT
ACACAGGATAGTGTAAATTCATGGCGTGATCAGGCAACTTTTTCAACGGAAGCAGAGGCTGTTGCATGGTTAAATGAACT
GGCCAATATTGGGGAACCGGCAGACAAAGCTAATCTTAATGCAACCATTGCGAGTGCTCAGGCTCTTGACCCAGAAACTT
ATACTTCAGTATCTTGGGTGGATGTTGCAAATGCTCTTAGCGATGCTGTTGCTGTGGCTGCTATGGAAAGCCCATCACAG
ACCAGAGTTGATGATACAAAGAGCCTGCTCGAGACTGCCGTGGCTGCATTGGTGCCCCGGGTTTAA

Upstream 100 bases:

>100_bases
CATTGGGTTGATGAAGCAGACGAGGCAGCTGCCCCCCAAGTGCAGGAAGCAATGGAAAAAGTTTTTGATAATTTCATGAA
CGGAAGGGAATGATTGATAA

Downstream 100 bases:

>100_bases
CGAGGTGATGGAATGTTTGAAAGCGATAGAAAAATAACAATCAGAAATAAAACATACCCTCTTTTGTTTAATGTGATTGC
CTTGAAAGAAGTATGTGAGA

Product: phi13 family phage major tail protein

Products: NA

Alternate protein names: Phi13 Family Phage Tail Protein

Number of amino acids: Translated: 261; Mature: 260

Protein sequence:

>261_residues
MAYIGLKHPVFAPIVSEPANGLPTYGTGLVVGRAIAANVSIELSDSKLPADDTIVEIDNSFISGTITTGIDDLSDEALKI
WLGQQAATLNGVATIRSAASYEAPNGGFGYYRVRKKNGVRSYRAYWYYKTKWGMPSEDASTKPDGAIEWQTPEVQGTIMA
TQDSVNSWRDQATFSTEAEAVAWLNELANIGEPADKANLNATIASAQALDPETYTSVSWVDVANALSDAVAVAAMESPSQ
TRVDDTKSLLETAVAALVPRV

Sequences:

>Translated_261_residues
MAYIGLKHPVFAPIVSEPANGLPTYGTGLVVGRAIAANVSIELSDSKLPADDTIVEIDNSFISGTITTGIDDLSDEALKI
WLGQQAATLNGVATIRSAASYEAPNGGFGYYRVRKKNGVRSYRAYWYYKTKWGMPSEDASTKPDGAIEWQTPEVQGTIMA
TQDSVNSWRDQATFSTEAEAVAWLNELANIGEPADKANLNATIASAQALDPETYTSVSWVDVANALSDAVAVAAMESPSQ
TRVDDTKSLLETAVAALVPRV
>Mature_260_residues
AYIGLKHPVFAPIVSEPANGLPTYGTGLVVGRAIAANVSIELSDSKLPADDTIVEIDNSFISGTITTGIDDLSDEALKIW
LGQQAATLNGVATIRSAASYEAPNGGFGYYRVRKKNGVRSYRAYWYYKTKWGMPSEDASTKPDGAIEWQTPEVQGTIMAT
QDSVNSWRDQATFSTEAEAVAWLNELANIGEPADKANLNATIASAQALDPETYTSVSWVDVANALSDAVAVAAMESPSQT
RVDDTKSLLETAVAALVPRV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27854; Mature: 27723

Theoretical pI: Translated: 4.23; Mature: 4.23

Prosite motif: PS00178 AA_TRNA_LIGASE_I

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAYIGLKHPVFAPIVSEPANGLPTYGTGLVVGRAIAANVSIELSDSKLPADDTIVEIDNS
CCEECCCCCCHHHHHCCCCCCCCCCCCHHHHHHEEEEEEEEEECCCCCCCCCEEEEECCC
FISGTITTGIDDLSDEALKIWLGQQAATLNGVATIRSAASYEAPNGGFGYYRVRKKNGVR
EEEEEEECCCCHHCCHHEEEEECCCCHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCC
SYRAYWYYKTKWGMPSEDASTKPDGAIEWQTPEVQGTIMATQDSVNSWRDQATFSTEAEA
EEEEEEEEEEECCCCCCCCCCCCCCEEEEECCCCCEEEEEECHHHHHHHHCCCCCCHHHH
VAWLNELANIGEPADKANLNATIASAQALDPETYTSVSWVDVANALSDAVAVAAMESPSQ
HHHHHHHHHCCCCCCCCCCCEEEECCCCCCCCHHCCCHHHHHHHHHHHHHHHEECCCCCC
TRVDDTKSLLETAVAALVPRV
CCHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
AYIGLKHPVFAPIVSEPANGLPTYGTGLVVGRAIAANVSIELSDSKLPADDTIVEIDNS
CEECCCCCCHHHHHCCCCCCCCCCCCHHHHHHEEEEEEEEEECCCCCCCCCEEEEECCC
FISGTITTGIDDLSDEALKIWLGQQAATLNGVATIRSAASYEAPNGGFGYYRVRKKNGVR
EEEEEEECCCCHHCCHHEEEEECCCCHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCC
SYRAYWYYKTKWGMPSEDASTKPDGAIEWQTPEVQGTIMATQDSVNSWRDQATFSTEAEA
EEEEEEEEEEECCCCCCCCCCCCCCEEEEECCCCCEEEEEECHHHHHHHHCCCCCCHHHH
VAWLNELANIGEPADKANLNATIASAQALDPETYTSVSWVDVANALSDAVAVAAMESPSQ
HHHHHHHHHCCCCCCCCCCCEEEECCCCCCCCHHCCCHHHHHHHHHHHHHHHEECCCCCC
TRVDDTKSLLETAVAALVPRV
CCHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA