Definition Desulfotomaculum reducens MI-1 chromosome, complete genome.
Accession NC_009253
Length 3,608,104

Click here to switch to the map view.

The map label for this gene is 134300440

Identifier: 134300440

GI number: 134300440

Start: 2826936

End: 2827352

Strand: Reverse

Name: 134300440

Synonym: Dred_2601

Alternate gene names: NA

Gene position: 2827352-2826936 (Counterclockwise)

Preceding gene: 134300441

Following gene: 134300439

Centisome position: 78.36

GC content: 43.88

Gene sequence:

>417_bases
ATGATGGCTCGGTTTAACACTTCCGGATTAGATGATTTAATCAATGATGTCATCCGCCTCGGTGACGCTGGTAAAGAAGT
CGGCGACAAAATGTTGATAGCCGCTGCAGTCGAAGTAAAAGAGGCTTGGAAGGACAGTGCCCAAAGGCACAACTTAAAAG
ATACTGGAGATATGATTAATTCAATCGGTTATCCACGCCAGCCTAAAAATGTTGGGGATGTTCGCACAATCGATATTTAT
CCCAAGGGAAAAGATCGAAAGGGAGTAATGAACGCTGAAAAGGCGTTTATTTTGCATTATGGTTCATCCTCTATAAAGCC
GACGCATTGGGTTGATGAAGCAGACGAGGCAGCTGCCCCCCAAGTGCAGGAAGCAATGGAAAAAGTTTTTGATAATTTCA
TGAACGGAAGGGAATGA

Upstream 100 bases:

>100_bases
TAAGCTCGTTACTTGACCGTGAGGACATATCATTTAGCTATTTAGTAGATTATGAGCAAGATACCGGTTATGTCCATCAT
ATTTGGGATTGCGAGGTGGC

Downstream 100 bases:

>100_bases
TTGATAAATGGCATACATCGGACTAAAACATCCGGTCTTTGCGCCGATTGTATCGGAACCGGCTAATGGTCTACCAACCT
ATGGAACCGGGCTAGTTGTA

Product: HK97 family phage protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 138; Mature: 138

Protein sequence:

>138_residues
MMARFNTSGLDDLINDVIRLGDAGKEVGDKMLIAAAVEVKEAWKDSAQRHNLKDTGDMINSIGYPRQPKNVGDVRTIDIY
PKGKDRKGVMNAEKAFILHYGSSSIKPTHWVDEADEAAAPQVQEAMEKVFDNFMNGRE

Sequences:

>Translated_138_residues
MMARFNTSGLDDLINDVIRLGDAGKEVGDKMLIAAAVEVKEAWKDSAQRHNLKDTGDMINSIGYPRQPKNVGDVRTIDIY
PKGKDRKGVMNAEKAFILHYGSSSIKPTHWVDEADEAAAPQVQEAMEKVFDNFMNGRE
>Mature_138_residues
MMARFNTSGLDDLINDVIRLGDAGKEVGDKMLIAAAVEVKEAWKDSAQRHNLKDTGDMINSIGYPRQPKNVGDVRTIDIY
PKGKDRKGVMNAEKAFILHYGSSSIKPTHWVDEADEAAAPQVQEAMEKVFDNFMNGRE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15353; Mature: 15353

Theoretical pI: Translated: 5.27; Mature: 5.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.1 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.1 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMARFNTSGLDDLINDVIRLGDAGKEVGDKMLIAAAVEVKEAWKDSAQRHNLKDTGDMIN
CCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH
SIGYPRQPKNVGDVRTIDIYPKGKDRKGVMNAEKAFILHYGSSSIKPTHWVDEADEAAAP
HCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCH
QVQEAMEKVFDNFMNGRE
HHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MMARFNTSGLDDLINDVIRLGDAGKEVGDKMLIAAAVEVKEAWKDSAQRHNLKDTGDMIN
CCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH
SIGYPRQPKNVGDVRTIDIYPKGKDRKGVMNAEKAFILHYGSSSIKPTHWVDEADEAAAP
HCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCH
QVQEAMEKVFDNFMNGRE
HHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA