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The map label for this gene is yhdE [C]

Identifier: 134300389

GI number: 134300389

Start: 2773427

End: 2774002

Strand: Reverse

Name: yhdE [C]

Synonym: Dred_2550

Alternate gene names: 134300389

Gene position: 2774002-2773427 (Counterclockwise)

Preceding gene: 134300390

Following gene: 134300388

Centisome position: 76.88

GC content: 45.31

Gene sequence:

>576_bases
GTGCGGCCAATTATTCTTGCATCTGCATCACCTAGGAGGCAGGAACTGCTTAAGAATCTGGGGTTAGAATTCGAGGTACA
AGTCAGTGATGTAGATGAGAATCTTGAAGAAAATATTTCTTCGGGTCAACTGGTAGAGAAACTTGCTGAGCGAAAAGCTG
CTGCAGTAGCGTTAATCCGAACTCAGGGCTTGGTTATTGGGGCCGATACTATTGTTGTCCTAGGGGACAAACCTTTGGGT
AAGCCCACCAACCGTGAGGAAGCCGTACAAATGTTGAGTAACCTGCAAGGAAAAAGCCATGAAGTTTTTACTGGTTTGGC
AGTTATTGATGCCTCTACGGGACAGCGAGTGGTCACGCATCAGGTTACAGAAGTTAATTTTAAAACTCTCACCAAAGATC
AAATAGAACGTTACGTGGACACCGGAGAGCCCATGGACAAGGCAGGAGGCTATGCCGTCCAAGGTCTGGCATCCATTTTT
ATTGACAGCATTCGTGGTTGCTATTTTAGTGTTGTTGGTTTGCCTATATCGAAGCTGGCAGACGCATTACGAATGTTTGG
AGTAGAAATTGTATGA

Upstream 100 bases:

>100_bases
CTTTGGTTTAACCATGTCCTTGGGTCCTGTTACTGCCCTAGGATTCTTTCTGGGTTTTCTGGTCTATAACAGGCTATAAA
AAACCTTAGGGGGGTAAGCT

Downstream 100 bases:

>100_bases
CTTATCCCGTAATACGTGAATTGCCCCCGGAAATGCGCCCCAGAGAACGTATGTTAAAAGAGGGCGCAGGGAGTCTCACC
GAAATTGATTTATTAGCTAT

Product: maf protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 191; Mature: 191

Protein sequence:

>191_residues
MRPIILASASPRRQELLKNLGLEFEVQVSDVDENLEENISSGQLVEKLAERKAAAVALIRTQGLVIGADTIVVLGDKPLG
KPTNREEAVQMLSNLQGKSHEVFTGLAVIDASTGQRVVTHQVTEVNFKTLTKDQIERYVDTGEPMDKAGGYAVQGLASIF
IDSIRGCYFSVVGLPISKLADALRMFGVEIV

Sequences:

>Translated_191_residues
MRPIILASASPRRQELLKNLGLEFEVQVSDVDENLEENISSGQLVEKLAERKAAAVALIRTQGLVIGADTIVVLGDKPLG
KPTNREEAVQMLSNLQGKSHEVFTGLAVIDASTGQRVVTHQVTEVNFKTLTKDQIERYVDTGEPMDKAGGYAVQGLASIF
IDSIRGCYFSVVGLPISKLADALRMFGVEIV
>Mature_191_residues
MRPIILASASPRRQELLKNLGLEFEVQVSDVDENLEENISSGQLVEKLAERKAAAVALIRTQGLVIGADTIVVLGDKPLG
KPTNREEAVQMLSNLQGKSHEVFTGLAVIDASTGQRVVTHQVTEVNFKTLTKDQIERYVDTGEPMDKAGGYAVQGLASIF
IDSIRGCYFSVVGLPISKLADALRMFGVEIV

Specific function: Unknown

COG id: COG0424

COG function: function code D; Nucleotide-binding protein implicated in inhibition of septum formation

Gene ontology:

Cell location: Cytoplasm (Potential)

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the maf family

Homologues:

Organism=Homo sapiens, GI117553627, Length=195, Percent_Identity=40.5128205128205, Blast_Score=139, Evalue=1e-33,
Organism=Homo sapiens, GI291045183, Length=186, Percent_Identity=35.4838709677419, Blast_Score=123, Evalue=1e-28,
Organism=Homo sapiens, GI291045181, Length=131, Percent_Identity=39.6946564885496, Blast_Score=110, Evalue=1e-24,
Organism=Homo sapiens, GI310133124, Length=131, Percent_Identity=39.6946564885496, Blast_Score=109, Evalue=2e-24,
Organism=Escherichia coli, GI1789646, Length=187, Percent_Identity=43.8502673796791, Blast_Score=141, Evalue=2e-35,
Organism=Escherichia coli, GI87081830, Length=188, Percent_Identity=32.9787234042553, Blast_Score=99, Evalue=1e-22,
Organism=Caenorhabditis elegans, GI193202443, Length=186, Percent_Identity=34.9462365591398, Blast_Score=111, Evalue=3e-25,
Organism=Saccharomyces cerevisiae, GI6324685, Length=207, Percent_Identity=30.4347826086957, Blast_Score=67, Evalue=1e-12,
Organism=Drosophila melanogaster, GI78706856, Length=194, Percent_Identity=42.7835051546392, Blast_Score=132, Evalue=1e-31,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y2550_DESRM (A4J7K7)

Other databases:

- EMBL:   CP000612
- RefSeq:   YP_001113885.1
- ProteinModelPortal:   A4J7K7
- SMR:   A4J7K7
- STRING:   A4J7K7
- GeneID:   4955518
- GenomeReviews:   CP000612_GR
- KEGG:   drm:Dred_2550
- eggNOG:   COG0424
- HOGENOM:   HBG414045
- OMA:   VVGLPLC
- PhylomeDB:   A4J7K7
- BioCyc:   DRED349161:DRED_2550-MONOMER
- GO:   GO:0005737
- HAMAP:   MF_00528
- InterPro:   IPR003697
- PIRSF:   PIRSF006305
- TIGRFAMs:   TIGR00172

Pfam domain/function: PF02545 Maf

EC number: NA

Molecular weight: Translated: 20695; Mature: 20695

Theoretical pI: Translated: 4.89; Mature: 4.89

Prosite motif: NA

Important sites: ACT_SITE 33-33

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRPIILASASPRRQELLKNLGLEFEVQVSDVDENLEENISSGQLVEKLAERKAAAVALIR
CCCEEECCCCHHHHHHHHHCCCEEEEEECCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH
TQGLVIGADTIVVLGDKPLGKPTNREEAVQMLSNLQGKSHEVFTGLAVIDASTGQRVVTH
HCCEEEECCEEEEECCCCCCCCCCHHHHHHHHHHCCCCCCHHEEEEEEEECCCCCEEEHH
QVTEVNFKTLTKDQIERYVDTGEPMDKAGGYAVQGLASIFIDSIRGCYFSVVGLPISKLA
HHHHCCHHHHCHHHHHHHHCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH
DALRMFGVEIV
HHHHHHCCCCC
>Mature Secondary Structure
MRPIILASASPRRQELLKNLGLEFEVQVSDVDENLEENISSGQLVEKLAERKAAAVALIR
CCCEEECCCCHHHHHHHHHCCCEEEEEECCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH
TQGLVIGADTIVVLGDKPLGKPTNREEAVQMLSNLQGKSHEVFTGLAVIDASTGQRVVTH
HCCEEEECCEEEEECCCCCCCCCCHHHHHHHHHHCCCCCCHHEEEEEEEECCCCCEEEHH
QVTEVNFKTLTKDQIERYVDTGEPMDKAGGYAVQGLASIFIDSIRGCYFSVVGLPISKLA
HHHHCCHHHHCHHHHHHHHCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH
DALRMFGVEIV
HHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA