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The map label for this gene is rex

Identifier: 134300390

GI number: 134300390

Start: 2774638

End: 2775270

Strand: Reverse

Name: rex

Synonym: Dred_2551

Alternate gene names: 134300390

Gene position: 2775270-2774638 (Counterclockwise)

Preceding gene: 134300391

Following gene: 134300389

Centisome position: 76.92

GC content: 41.71

Gene sequence:

>633_bases
GTGAAAGCGCTGAAGATCCCAGAAGCAACCATTACTAGATTGTCTATCTATTCTAGGTTTTTAAAGAGACTTGATAAAAA
GGGCATTACAACCGTATCCTCTGGAGACATAGCCGAAGGTGTTGGGGTAAGTCCTGCCCAGGTTCGTAAGGATTTAGCAT
ACTTTGGCGAATTTGGTACCAGAGGCGTAGGATACAATGTTAAGGATTTAATCCGTTACACTGTCAAGATTCTGGGTTTA
TCCGACCCATGGAACCTTGTTATGGTAGGGGCCGGTAACTTAGGCTCTGCTTTGGTTACCTATAGGGAATTTAAAGACCG
GGGCTTTTCCATTGTCGGGGTATTTGATAATGATCTTACCAAGATTGGTAAGCGCATTGCTGATATGGAAGTACTTCCTC
TGGAGGAACTGTCCAGAGTGGTAAAGGAACATAATGTTAGGATTGGGATTATTGCAGTACCTTCAAAGGCAGCCCAGGAT
ATTGCGGACATTATGGTAAAGGCAGGGTTGGAGGCACTCCTAAACTTTGCACCTATTTCATTAAATTTACCCGATGATGT
GGAAGTACGAAATGTAGATCTTTCAGTCAAATTAGAAATATTAACCTTTAACTTAGCCCTAAAAGAAAAATAG

Upstream 100 bases:

>100_bases
TTTGCAACTGGTTTATTTACGACTATAATATATTCATAAGAACAAAAGAATTGCAATGAGCGAAATTAAATTATTTTATA
CATAAAGGGGAGGGGACTTG

Downstream 100 bases:

>100_bases
AAGGTGGGTAATAGCCCACCTTCTATTTTTTTACATACCGTGAGCCTGAATTTTTCTATATGTACAAGGTAACGTGGCAA
TGCTTTAAAAGTTTCCCCAT

Product: redox-sensing transcriptional repressor Rex

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 210; Mature: 210

Protein sequence:

>210_residues
MKALKIPEATITRLSIYSRFLKRLDKKGITTVSSGDIAEGVGVSPAQVRKDLAYFGEFGTRGVGYNVKDLIRYTVKILGL
SDPWNLVMVGAGNLGSALVTYREFKDRGFSIVGVFDNDLTKIGKRIADMEVLPLEELSRVVKEHNVRIGIIAVPSKAAQD
IADIMVKAGLEALLNFAPISLNLPDDVEVRNVDLSVKLEILTFNLALKEK

Sequences:

>Translated_210_residues
MKALKIPEATITRLSIYSRFLKRLDKKGITTVSSGDIAEGVGVSPAQVRKDLAYFGEFGTRGVGYNVKDLIRYTVKILGL
SDPWNLVMVGAGNLGSALVTYREFKDRGFSIVGVFDNDLTKIGKRIADMEVLPLEELSRVVKEHNVRIGIIAVPSKAAQD
IADIMVKAGLEALLNFAPISLNLPDDVEVRNVDLSVKLEILTFNLALKEK
>Mature_210_residues
MKALKIPEATITRLSIYSRFLKRLDKKGITTVSSGDIAEGVGVSPAQVRKDLAYFGEFGTRGVGYNVKDLIRYTVKILGL
SDPWNLVMVGAGNLGSALVTYREFKDRGFSIVGVFDNDLTKIGKRIADMEVLPLEELSRVVKEHNVRIGIIAVPSKAAQD
IADIMVKAGLEALLNFAPISLNLPDDVEVRNVDLSVKLEILTFNLALKEK

Specific function: Modulates transcription in response to changes in cellular NADH/NAD(+) redox state

COG id: COG2344

COG function: function code R; AT-rich DNA-binding protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the transcriptional regulatory rex family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): REX_DESRM (A4J7K8)

Other databases:

- EMBL:   CP000612
- RefSeq:   YP_001113886.1
- ProteinModelPortal:   A4J7K8
- SMR:   A4J7K8
- STRING:   A4J7K8
- GeneID:   4955255
- GenomeReviews:   CP000612_GR
- KEGG:   drm:Dred_2551
- eggNOG:   COG2344
- HOGENOM:   HBG482264
- OMA:   TRGVGYD
- ProtClustDB:   PRK05472
- BioCyc:   DRED349161:DRED_2551-MONOMER
- GO:   GO:0005737
- GO:   GO:0006350
- HAMAP:   MF_01131
- InterPro:   IPR003781
- InterPro:   IPR016040
- InterPro:   IPR009718
- InterPro:   IPR022876
- InterPro:   IPR011991
- Gene3D:   G3DSA:3.40.50.720
- Gene3D:   G3DSA:1.10.10.10
- SMART:   SM00881

Pfam domain/function: PF02629 CoA_binding; PF06971 Put_DNA-bind_N

EC number: NA

Molecular weight: Translated: 23032; Mature: 23032

Theoretical pI: Translated: 9.57; Mature: 9.57

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKALKIPEATITRLSIYSRFLKRLDKKGITTVSSGDIAEGVGVSPAQVRKDLAYFGEFGT
CCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCHHHHHHHHHHHHCCCC
RGVGYNVKDLIRYTVKILGLSDPWNLVMVGAGNLGSALVTYREFKDRGFSIVGVFDNDLT
CCCCCCHHHHHHHHHHHCCCCCCCCEEEEECCCCCHHHHHHHHHHHCCCEEEEEECCHHH
KIGKRIADMEVLPLEELSRVVKEHNVRIGIIAVPSKAAQDIADIMVKAGLEALLNFAPIS
HHHHHHHCCCCCCHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCEE
LNLPDDVEVRNVDLSVKLEILTFNLALKEK
ECCCCCCEEEECCEEEEEEEEEEEEEECCC
>Mature Secondary Structure
MKALKIPEATITRLSIYSRFLKRLDKKGITTVSSGDIAEGVGVSPAQVRKDLAYFGEFGT
CCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCHHHHHHHHHHHHCCCC
RGVGYNVKDLIRYTVKILGLSDPWNLVMVGAGNLGSALVTYREFKDRGFSIVGVFDNDLT
CCCCCCHHHHHHHHHHHCCCCCCCCEEEEECCCCCHHHHHHHHHHHCCCEEEEEECCHHH
KIGKRIADMEVLPLEELSRVVKEHNVRIGIIAVPSKAAQDIADIMVKAGLEALLNFAPIS
HHHHHHHCCCCCCHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCEE
LNLPDDVEVRNVDLSVKLEILTFNLALKEK
ECCCCCCEEEECCEEEEEEEEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA