Definition Desulfotomaculum reducens MI-1 chromosome, complete genome.
Accession NC_009253
Length 3,608,104

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The map label for this gene is 134300376

Identifier: 134300376

GI number: 134300376

Start: 2760391

End: 2761083

Strand: Reverse

Name: 134300376

Synonym: Dred_2537

Alternate gene names: NA

Gene position: 2761083-2760391 (Counterclockwise)

Preceding gene: 134300377

Following gene: 134300375

Centisome position: 76.52

GC content: 44.59

Gene sequence:

>693_bases
TTGCCCCGATACAGGGTGAAGTATAGTAAAGAAGGTCCGGCCCGGTATAGCTCTCATCTGGACATGGTGCGGTTCTTTGA
TCGGTCTACCAGAAGGGCGAAGTTACCAGTGGCATTTTCTGAGGGCTTTAACCCCCACCCCAAATTTAGCTTTGCGGTCC
CGTTACCGGTTGGCATAGCGGGATTGGAGGAATATATGGATATGGAACTAAAAGAATACTTAGATCCTAGAGAAATTGCA
CTTAGACTGGAACCTAATTTGCCTGAAGGATATAAAATACTGGATATAAAACAAATTGAAGATCGGGCTGTTACTCTCAT
GTCAATTGTCTCACGGGCTGATTATTGGGCAACAGCACCGCTTCCCACAGGTTATTCCGAAGGGCAATTGAAGGCCACCA
TTGATAAATTATTAGAGCAAGAGGAAATTATCGTAACCCGAGAAACTAAGGGTAAAGTAAAGGAAGTTAATATTCGTCCA
GGAATTTTTAGTCTAGCTGGTGATGTTAAGGGGCATATACTAGAAATAAAAATGGAATTGCTCATTGGCAGTACGGGAAA
TGTTCGCCCCGAAGAAATTTTTAAAAAGCTTTACAAAAACGGGGTTCCAGTTGATCCGGATGATTACCGGGTACGTCGTA
CGGCCCTGTACGCCGATGACGGCACTGGCCCGATTTCTCTCTGGGAGGTCTAA

Upstream 100 bases:

>100_bases
GGGAGTGAACCCACCATGGACTGCCGAAATGGTAAGTGCACCGGCTGTGGTCTTTGCCCAACCCTTGAAATTAGACCAAT
GATTTTGGGAGGTGTGGATA

Downstream 100 bases:

>100_bases
TGGCCAGCAGTAAGAGAGGAAGTTCAAAATGTTAAAAGAAATTGTTATTAATGTTCAAGAAGAGGAAACACGGGTTGCCG
TACTGGAAGACCGGGTGTTG

Product: hypothetical protein

Products: NA

Alternate protein names: Radical SAM Domain-Containing Protein; Fe-S Oxidoreductase; Elongator /MiaB/NifB; Radical SAM Family Protein; Conserved Protein; Radical Sam Protein; LOW QUALITY PROTEIN Fe-S Oxidoreductase

Number of amino acids: Translated: 230; Mature: 229

Protein sequence:

>230_residues
MPRYRVKYSKEGPARYSSHLDMVRFFDRSTRRAKLPVAFSEGFNPHPKFSFAVPLPVGIAGLEEYMDMELKEYLDPREIA
LRLEPNLPEGYKILDIKQIEDRAVTLMSIVSRADYWATAPLPTGYSEGQLKATIDKLLEQEEIIVTRETKGKVKEVNIRP
GIFSLAGDVKGHILEIKMELLIGSTGNVRPEEIFKKLYKNGVPVDPDDYRVRRTALYADDGTGPISLWEV

Sequences:

>Translated_230_residues
MPRYRVKYSKEGPARYSSHLDMVRFFDRSTRRAKLPVAFSEGFNPHPKFSFAVPLPVGIAGLEEYMDMELKEYLDPREIA
LRLEPNLPEGYKILDIKQIEDRAVTLMSIVSRADYWATAPLPTGYSEGQLKATIDKLLEQEEIIVTRETKGKVKEVNIRP
GIFSLAGDVKGHILEIKMELLIGSTGNVRPEEIFKKLYKNGVPVDPDDYRVRRTALYADDGTGPISLWEV
>Mature_229_residues
PRYRVKYSKEGPARYSSHLDMVRFFDRSTRRAKLPVAFSEGFNPHPKFSFAVPLPVGIAGLEEYMDMELKEYLDPREIAL
RLEPNLPEGYKILDIKQIEDRAVTLMSIVSRADYWATAPLPTGYSEGQLKATIDKLLEQEEIIVTRETKGKVKEVNIRPG
IFSLAGDVKGHILEIKMELLIGSTGNVRPEEIFKKLYKNGVPVDPDDYRVRRTALYADDGTGPISLWEV

Specific function: Unknown

COG id: COG5011

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26175; Mature: 26043

Theoretical pI: Translated: 6.83; Mature: 6.83

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPRYRVKYSKEGPARYSSHLDMVRFFDRSTRRAKLPVAFSEGFNPHPKFSFAVPLPVGIA
CCCCEEEECCCCCHHHHHHHHHHHHHCCCCCCEECCEECCCCCCCCCCEEEECCCCCCHH
GLEEYMDMELKEYLDPREIALRLEPNLPEGYKILDIKQIEDRAVTLMSIVSRADYWATAP
HHHHHHHHHHHHCCCHHHEEEEECCCCCCCEEEEEEEHHHHHHHHHHHHHHHCCCEEECC
LPTGYSEGQLKATIDKLLEQEEIIVTRETKGKVKEVNIRPGIFSLAGDVKGHILEIKMEL
CCCCCCCCCHHHHHHHHCCCCCEEEEECCCCCEEEEEECCCHHHHCCCCCCEEEEEEEEE
LIGSTGNVRPEEIFKKLYKNGVPVDPDDYRVRRTALYADDGTGPISLWEV
EECCCCCCCHHHHHHHHHHCCCCCCCCCCEEEEEEEEECCCCCCEEEECC
>Mature Secondary Structure 
PRYRVKYSKEGPARYSSHLDMVRFFDRSTRRAKLPVAFSEGFNPHPKFSFAVPLPVGIA
CCCEEEECCCCCHHHHHHHHHHHHHCCCCCCEECCEECCCCCCCCCCEEEECCCCCCHH
GLEEYMDMELKEYLDPREIALRLEPNLPEGYKILDIKQIEDRAVTLMSIVSRADYWATAP
HHHHHHHHHHHHCCCHHHEEEEECCCCCCCEEEEEEEHHHHHHHHHHHHHHHCCCEEECC
LPTGYSEGQLKATIDKLLEQEEIIVTRETKGKVKEVNIRPGIFSLAGDVKGHILEIKMEL
CCCCCCCCCHHHHHHHHCCCCCEEEEECCCCCEEEEEECCCHHHHCCCCCCEEEEEEEEE
LIGSTGNVRPEEIFKKLYKNGVPVDPDDYRVRRTALYADDGTGPISLWEV
EECCCCCCCHHHHHHHHHHCCCCCCCCCCEEEEEEEEECCCCCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA