| Definition | Desulfotomaculum reducens MI-1 chromosome, complete genome. |
|---|---|
| Accession | NC_009253 |
| Length | 3,608,104 |
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The map label for this gene is 134300376
Identifier: 134300376
GI number: 134300376
Start: 2760391
End: 2761083
Strand: Reverse
Name: 134300376
Synonym: Dred_2537
Alternate gene names: NA
Gene position: 2761083-2760391 (Counterclockwise)
Preceding gene: 134300377
Following gene: 134300375
Centisome position: 76.52
GC content: 44.59
Gene sequence:
>693_bases TTGCCCCGATACAGGGTGAAGTATAGTAAAGAAGGTCCGGCCCGGTATAGCTCTCATCTGGACATGGTGCGGTTCTTTGA TCGGTCTACCAGAAGGGCGAAGTTACCAGTGGCATTTTCTGAGGGCTTTAACCCCCACCCCAAATTTAGCTTTGCGGTCC CGTTACCGGTTGGCATAGCGGGATTGGAGGAATATATGGATATGGAACTAAAAGAATACTTAGATCCTAGAGAAATTGCA CTTAGACTGGAACCTAATTTGCCTGAAGGATATAAAATACTGGATATAAAACAAATTGAAGATCGGGCTGTTACTCTCAT GTCAATTGTCTCACGGGCTGATTATTGGGCAACAGCACCGCTTCCCACAGGTTATTCCGAAGGGCAATTGAAGGCCACCA TTGATAAATTATTAGAGCAAGAGGAAATTATCGTAACCCGAGAAACTAAGGGTAAAGTAAAGGAAGTTAATATTCGTCCA GGAATTTTTAGTCTAGCTGGTGATGTTAAGGGGCATATACTAGAAATAAAAATGGAATTGCTCATTGGCAGTACGGGAAA TGTTCGCCCCGAAGAAATTTTTAAAAAGCTTTACAAAAACGGGGTTCCAGTTGATCCGGATGATTACCGGGTACGTCGTA CGGCCCTGTACGCCGATGACGGCACTGGCCCGATTTCTCTCTGGGAGGTCTAA
Upstream 100 bases:
>100_bases GGGAGTGAACCCACCATGGACTGCCGAAATGGTAAGTGCACCGGCTGTGGTCTTTGCCCAACCCTTGAAATTAGACCAAT GATTTTGGGAGGTGTGGATA
Downstream 100 bases:
>100_bases TGGCCAGCAGTAAGAGAGGAAGTTCAAAATGTTAAAAGAAATTGTTATTAATGTTCAAGAAGAGGAAACACGGGTTGCCG TACTGGAAGACCGGGTGTTG
Product: hypothetical protein
Products: NA
Alternate protein names: Radical SAM Domain-Containing Protein; Fe-S Oxidoreductase; Elongator /MiaB/NifB; Radical SAM Family Protein; Conserved Protein; Radical Sam Protein; LOW QUALITY PROTEIN Fe-S Oxidoreductase
Number of amino acids: Translated: 230; Mature: 229
Protein sequence:
>230_residues MPRYRVKYSKEGPARYSSHLDMVRFFDRSTRRAKLPVAFSEGFNPHPKFSFAVPLPVGIAGLEEYMDMELKEYLDPREIA LRLEPNLPEGYKILDIKQIEDRAVTLMSIVSRADYWATAPLPTGYSEGQLKATIDKLLEQEEIIVTRETKGKVKEVNIRP GIFSLAGDVKGHILEIKMELLIGSTGNVRPEEIFKKLYKNGVPVDPDDYRVRRTALYADDGTGPISLWEV
Sequences:
>Translated_230_residues MPRYRVKYSKEGPARYSSHLDMVRFFDRSTRRAKLPVAFSEGFNPHPKFSFAVPLPVGIAGLEEYMDMELKEYLDPREIA LRLEPNLPEGYKILDIKQIEDRAVTLMSIVSRADYWATAPLPTGYSEGQLKATIDKLLEQEEIIVTRETKGKVKEVNIRP GIFSLAGDVKGHILEIKMELLIGSTGNVRPEEIFKKLYKNGVPVDPDDYRVRRTALYADDGTGPISLWEV >Mature_229_residues PRYRVKYSKEGPARYSSHLDMVRFFDRSTRRAKLPVAFSEGFNPHPKFSFAVPLPVGIAGLEEYMDMELKEYLDPREIAL RLEPNLPEGYKILDIKQIEDRAVTLMSIVSRADYWATAPLPTGYSEGQLKATIDKLLEQEEIIVTRETKGKVKEVNIRPG IFSLAGDVKGHILEIKMELLIGSTGNVRPEEIFKKLYKNGVPVDPDDYRVRRTALYADDGTGPISLWEV
Specific function: Unknown
COG id: COG5011
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26175; Mature: 26043
Theoretical pI: Translated: 6.83; Mature: 6.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPRYRVKYSKEGPARYSSHLDMVRFFDRSTRRAKLPVAFSEGFNPHPKFSFAVPLPVGIA CCCCEEEECCCCCHHHHHHHHHHHHHCCCCCCEECCEECCCCCCCCCCEEEECCCCCCHH GLEEYMDMELKEYLDPREIALRLEPNLPEGYKILDIKQIEDRAVTLMSIVSRADYWATAP HHHHHHHHHHHHCCCHHHEEEEECCCCCCCEEEEEEEHHHHHHHHHHHHHHHCCCEEECC LPTGYSEGQLKATIDKLLEQEEIIVTRETKGKVKEVNIRPGIFSLAGDVKGHILEIKMEL CCCCCCCCCHHHHHHHHCCCCCEEEEECCCCCEEEEEECCCHHHHCCCCCCEEEEEEEEE LIGSTGNVRPEEIFKKLYKNGVPVDPDDYRVRRTALYADDGTGPISLWEV EECCCCCCCHHHHHHHHHHCCCCCCCCCCEEEEEEEEECCCCCCEEEECC >Mature Secondary Structure PRYRVKYSKEGPARYSSHLDMVRFFDRSTRRAKLPVAFSEGFNPHPKFSFAVPLPVGIA CCCEEEECCCCCHHHHHHHHHHHHHCCCCCCEECCEECCCCCCCCCCEEEECCCCCCHH GLEEYMDMELKEYLDPREIALRLEPNLPEGYKILDIKQIEDRAVTLMSIVSRADYWATAP HHHHHHHHHHHHCCCHHHEEEEECCCCCCCEEEEEEEHHHHHHHHHHHHHHHCCCEEECC LPTGYSEGQLKATIDKLLEQEEIIVTRETKGKVKEVNIRPGIFSLAGDVKGHILEIKMEL CCCCCCCCCHHHHHHHHCCCCCEEEEECCCCCEEEEEECCCHHHHCCCCCCEEEEEEEEE LIGSTGNVRPEEIFKKLYKNGVPVDPDDYRVRRTALYADDGTGPISLWEV EECCCCCCCHHHHHHHHHHCCCCCCCCCCEEEEEEEEECCCCCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA