| Definition | Desulfotomaculum reducens MI-1 chromosome, complete genome. |
|---|---|
| Accession | NC_009253 |
| Length | 3,608,104 |
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The map label for this gene is 134300228
Identifier: 134300228
GI number: 134300228
Start: 2610965
End: 2611630
Strand: Reverse
Name: 134300228
Synonym: Dred_2389
Alternate gene names: NA
Gene position: 2611630-2610965 (Counterclockwise)
Preceding gene: 134300229
Following gene: 134300227
Centisome position: 72.38
GC content: 43.09
Gene sequence:
>666_bases GTGGCAATTGAAAGAATTAAAGTGGGACAAAAGGTTACTATTTTTCCAATGGACACAGAAGAACAGTATTTGAGTTCTGT TTATGATATGGATAACAAAGGGATATATGTACCCATTCCATATGCGGAGAAGCATCCGTTAATTTTAGCCCATGGACAGC AAATTCGTGTAAAGTACATGGGGGAAGGCAGTGCCTATCTGTTTGTTACCGAAGCCATTGGCAGAAGGATAGAACAGGAC AAGTTACCCATGTATATCTTGAAACACCCAAAGGAGTCAGAGATTACCAGAGTGCAGCTCAGGGAATTTGCCCGGGTGCC GGTGATGTTGGACATTGAGTATGCAGAAGCAGTGGCCGACAACGAGTCACCAAGCTTCAAAAAGGTGTGTATTGTAGATC TCAGTGGCGGAGGCTTAAAGTTTGCTTTAAAGGAGCCTATTAATCGGGGCACAAACATCATGGTACGCTTTACACTGGCT GTAAAGGCAAAGAAGAAGACCCAAGAGTTTAAGTTATTAGCCAGAGTCATGCGATGCCAATTGGTTGACGAAGAAGCAAA GGTATATCATGTTGGCGTAAGGTTTACCGATATTCGACCCCAGCAGCAAGATATGATTATGGCCTTTGTGTTTGAACGGA TGATTCAAATAAAACGCAGGCAGTAA
Upstream 100 bases:
>100_bases GATTGTCAATTGCTTAATTTCCGGAAAAGAGGAAGCAGCTTCAGGGGTGCAAAGTTTTTTTGGAAAACTAATGCGGTTGT TTCGCTAGGGAGCTGATGGT
Downstream 100 bases:
>100_bases TTGGATGTGGAAAGCATGTCGATTGATCTCTTATGGGAAAAATACATAACGCTTCGTGATCCGGAAGCCAGGCAGAAAAT AATCCTGCTTCATTTACCTC
Product: type IV pilus assembly PilZ
Products: NA
Alternate protein names: Flagellar Protein; Type IV Pilus Assembly Protein PilZ; PilZ Domain-Containing Protein; Glycosyltransferase-Like; Glycosyltransferase
Number of amino acids: Translated: 221; Mature: 220
Protein sequence:
>221_residues MAIERIKVGQKVTIFPMDTEEQYLSSVYDMDNKGIYVPIPYAEKHPLILAHGQQIRVKYMGEGSAYLFVTEAIGRRIEQD KLPMYILKHPKESEITRVQLREFARVPVMLDIEYAEAVADNESPSFKKVCIVDLSGGGLKFALKEPINRGTNIMVRFTLA VKAKKKTQEFKLLARVMRCQLVDEEAKVYHVGVRFTDIRPQQQDMIMAFVFERMIQIKRRQ
Sequences:
>Translated_221_residues MAIERIKVGQKVTIFPMDTEEQYLSSVYDMDNKGIYVPIPYAEKHPLILAHGQQIRVKYMGEGSAYLFVTEAIGRRIEQD KLPMYILKHPKESEITRVQLREFARVPVMLDIEYAEAVADNESPSFKKVCIVDLSGGGLKFALKEPINRGTNIMVRFTLA VKAKKKTQEFKLLARVMRCQLVDEEAKVYHVGVRFTDIRPQQQDMIMAFVFERMIQIKRRQ >Mature_220_residues AIERIKVGQKVTIFPMDTEEQYLSSVYDMDNKGIYVPIPYAEKHPLILAHGQQIRVKYMGEGSAYLFVTEAIGRRIEQDK LPMYILKHPKESEITRVQLREFARVPVMLDIEYAEAVADNESPSFKKVCIVDLSGGGLKFALKEPINRGTNIMVRFTLAV KAKKKTQEFKLLARVMRCQLVDEEAKVYHVGVRFTDIRPQQQDMIMAFVFERMIQIKRRQ
Specific function: Unknown
COG id: COG5581
COG function: function code M; Predicted glycosyltransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25602; Mature: 25470
Theoretical pI: Translated: 9.73; Mature: 9.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 5.0 %Met (Translated Protein) 5.9 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 4.5 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAIERIKVGQKVTIFPMDTEEQYLSSVYDMDNKGIYVPIPYAEKHPLILAHGQQIRVKYM CCCCEEECCCEEEEEECCCHHHHHHHHHCCCCCCEEEECCCCCCCCEEEECCCEEEEEEE GEGSAYLFVTEAIGRRIEQDKLPMYILKHPKESEITRVQLREFARVPVMLDIEYAEAVAD CCCCEEEEEEHHHCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHCCCEEEEEHHHHHHCC NESPSFKKVCIVDLSGGGLKFALKEPINRGTNIMVRFTLAVKAKKKTQEFKLLARVMRCQ CCCCCEEEEEEEEECCCCEEEEECCCCCCCCEEEEEEEEEEECCHHHHHHHHHHHHHHHH LVDEEAKVYHVGVRFTDIRPQQQDMIMAFVFERMIQIKRRQ HCCCCCEEEEEEEEEEECCCCHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure AIERIKVGQKVTIFPMDTEEQYLSSVYDMDNKGIYVPIPYAEKHPLILAHGQQIRVKYM CCCEEECCCEEEEEECCCHHHHHHHHHCCCCCCEEEECCCCCCCCEEEECCCEEEEEEE GEGSAYLFVTEAIGRRIEQDKLPMYILKHPKESEITRVQLREFARVPVMLDIEYAEAVAD CCCCEEEEEEHHHCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHCCCEEEEEHHHHHHCC NESPSFKKVCIVDLSGGGLKFALKEPINRGTNIMVRFTLAVKAKKKTQEFKLLARVMRCQ CCCCCEEEEEEEEECCCCEEEEECCCCCCCCEEEEEEEEEEECCHHHHHHHHHHHHHHHH LVDEEAKVYHVGVRFTDIRPQQQDMIMAFVFERMIQIKRRQ HCCCCCEEEEEEEEEEECCCCHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA