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The map label for this gene is cheD

Identifier: 134300224

GI number: 134300224

Start: 2608023

End: 2608523

Strand: Reverse

Name: cheD

Synonym: Dred_2385

Alternate gene names: 134300224

Gene position: 2608523-2608023 (Counterclockwise)

Preceding gene: 134300225

Following gene: 134300223

Centisome position: 72.3

GC content: 45.71

Gene sequence:

>501_bases
ATGGAGCTAGCAAAGGGAAATGCGGAAATACAGGTCGGGATAGCCGACTACAAGGTCGCAGCTTCCCCCAATCGCCTGAT
AACCCTGGGATTGGGTTCCTGTGTTGGGGTGGTGCTTTACGATCCTGTTAAAAAAGTCGGAGGGCTTTTACACATAATGC
TCCCGGACAGTACACAATTTAATAATGTTACAAAACCTGCCAAGTTTGCGGATACGGGAATACCGTTGATGATTGATGAA
ATTAAACGGTTAGGCGGTATCCCCAGTAGGCTAACGGCTAAATTAGCCGGCGGAGCCCAAATGTTCTCAGGCTTGGACGA
AAAATTTGTTTTAAATATTGGTCAGCGTAATTCTAAAATGGTAAAGGAGATTTTGTCTCGTATGGGAATTCGCATACTGG
CAGAAGAATTGGGTGGCAATCGTGGTAGAACCATGATCTTTGATATAGCCAGCGGCCAGGTCACCATACGGACCATTGGT
TCTCCATTGAAGGTGATATAG

Upstream 100 bases:

>100_bases
ACTCACGCACTATCCAAACTGCCGATGAAATGTGGGATAGAGCCAATAATTTAAGAAAATAAAATAAATCTTGATGATAA
TATAGCTTAGGGGGGCGGAC

Downstream 100 bases:

>100_bases
AATGACAGACTTTGATCGTTTTAAAGAGAAAATCTATCAGACCTTTGGTTTAGATTTGCACAGCTATAAAGAAAACCAGC
TAAAAAGACGATTGGACAAT

Product: CheD, stimulates methylation of MCP proteins

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 166; Mature: 166

Protein sequence:

>166_residues
MELAKGNAEIQVGIADYKVAASPNRLITLGLGSCVGVVLYDPVKKVGGLLHIMLPDSTQFNNVTKPAKFADTGIPLMIDE
IKRLGGIPSRLTAKLAGGAQMFSGLDEKFVLNIGQRNSKMVKEILSRMGIRILAEELGGNRGRTMIFDIASGQVTIRTIG
SPLKVI

Sequences:

>Translated_166_residues
MELAKGNAEIQVGIADYKVAASPNRLITLGLGSCVGVVLYDPVKKVGGLLHIMLPDSTQFNNVTKPAKFADTGIPLMIDE
IKRLGGIPSRLTAKLAGGAQMFSGLDEKFVLNIGQRNSKMVKEILSRMGIRILAEELGGNRGRTMIFDIASGQVTIRTIG
SPLKVI
>Mature_166_residues
MELAKGNAEIQVGIADYKVAASPNRLITLGLGSCVGVVLYDPVKKVGGLLHIMLPDSTQFNNVTKPAKFADTGIPLMIDE
IKRLGGIPSRLTAKLAGGAQMFSGLDEKFVLNIGQRNSKMVKEILSRMGIRILAEELGGNRGRTMIFDIASGQVTIRTIG
SPLKVI

Specific function: Probably deamidates glutamine residues to glutamate on methyl-accepting chemotaxis receptors (MCPs), playing an important role in chemotaxis

COG id: COG1871

COG function: function code NT; Chemotaxis protein; stimulates methylation of MCP proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CheD family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): CHED_DESRM (A4J742)

Other databases:

- EMBL:   CP000612
- RefSeq:   YP_001113720.1
- ProteinModelPortal:   A4J742
- SMR:   A4J742
- STRING:   A4J742
- GeneID:   4956935
- GenomeReviews:   CP000612_GR
- KEGG:   drm:Dred_2385
- eggNOG:   COG1871
- HOGENOM:   HBG531149
- OMA:   GGAAMFK
- ProtClustDB:   CLSK842017
- BioCyc:   DRED349161:DRED_2385-MONOMER
- GO:   GO:0006935
- HAMAP:   MF_01440
- InterPro:   IPR005659

Pfam domain/function: PF03975 CheD

EC number: =3.5.1.44

Molecular weight: Translated: 17748; Mature: 17748

Theoretical pI: Translated: 10.43; Mature: 10.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MELAKGNAEIQVGIADYKVAASPNRLITLGLGSCVGVVLYDPVKKVGGLLHIMLPDSTQF
CCCCCCCCEEEEEEEEEEEECCCCEEEEEECCCHHHHHHHHHHHHHCCEEEEEECCCCCC
NNVTKPAKFADTGIPLMIDEIKRLGGIPSRLTAKLAGGAQMFSGLDEKFVLNIGQRNSKM
CCCCCCCHHCCCCCCHHHHHHHHHCCCCHHHHHHHCCCHHHHHCCCCEEEEECCCCCHHH
VKEILSRMGIRILAEELGGNRGRTMIFDIASGQVTIRTIGSPLKVI
HHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCEEEEEECCCCCCCC
>Mature Secondary Structure
MELAKGNAEIQVGIADYKVAASPNRLITLGLGSCVGVVLYDPVKKVGGLLHIMLPDSTQF
CCCCCCCCEEEEEEEEEEEECCCCEEEEEECCCHHHHHHHHHHHHHCCEEEEEECCCCCC
NNVTKPAKFADTGIPLMIDEIKRLGGIPSRLTAKLAGGAQMFSGLDEKFVLNIGQRNSKM
CCCCCCCHHCCCCCCHHHHHHHHHCCCCHHHHHHHCCCHHHHHCCCCEEEEECCCCCHHH
VKEILSRMGIRILAEELGGNRGRTMIFDIASGQVTIRTIGSPLKVI
HHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCEEEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA