| Definition | Desulfotomaculum reducens MI-1 chromosome, complete genome. |
|---|---|
| Accession | NC_009253 |
| Length | 3,608,104 |
Click here to switch to the map view.
The map label for this gene is 134300213
Identifier: 134300213
GI number: 134300213
Start: 2598888
End: 2599730
Strand: Reverse
Name: 134300213
Synonym: Dred_2374
Alternate gene names: NA
Gene position: 2599730-2598888 (Counterclockwise)
Preceding gene: 134300214
Following gene: 134300212
Centisome position: 72.05
GC content: 41.76
Gene sequence:
>843_bases ATGCAGCTTACTGTATTAGTGGATAACAATACGATTATTGATCGGTATTTGATTGGAGAGCCAGGTTTGTCGTTCTTTTT GGAAACCGGGGGAAAGCGAATCCTGTTTGATACTGGTTATTCAGATGCATTTATACAAAACGCAGGAAAGATAGGGATCA ATCTTCGGGTATTAGACTACGTTGTACTCTCCCACGGGCATATGGATCATACTTGGGGCTTAGATCCCCTTATACGGCTT TATACAGAAGCCATCATAGAAAACCAAGCGGGGATGTTAAAACCTGTGGTTGTGGGACATTCTGATGTTTTCTATAGCAA ACGATTAAAGGGAATGGGGGAAATAGGGAGTACTGTGGCAAAGAGCAAACTCTCCCAACACTTTGAACTCAAGCTGTTGA AAAATCCCCTTTGGCTTACTGAAAAACTAGTTTTCCTAGGTGAAATACCAAGGACCTATGAGTTTGAAGCTAAGACCCCC CTAGGTACTGTCCTAAAAAAATCCCATGAAGAAGAGGATTTTCTGTTGGATGATACAGCCCTGGCGTATAAAGCAAAGGA CGGGTTAGTCATTATAGTTGGTTGTTCCCACTCAGGTATTTGTAATATTGTTGAGTATGCTAAGAAGGTTTGCCAGGATG AGCGGGTGCTAGACATTATTGGAGGATTTCATTTGCTAAGTCCACCCCGGAGTCAGATGGACGGTGTTAAGGATTATCTC AGGACATTACAACCAAAGGAAGTACATGCCTGTCATTGTACGGATCTTCAAGCCAAGATAGAGTTGTCAGAGGTTGTTAA TTTAAAAGAGGTAGGGGTAGGGTTAAAATTACAGTATGATTGA
Upstream 100 bases:
>100_bases TCTGGACAATACCAGGAGGCTTTTTAGTATATCAAAAGAATAAATTTTTCTGATATGATAAAGGCAAACTAAGAGGGATT AAACCACAAAGGAGAAAACC
Downstream 100 bases:
>100_bases GTTTGTAACTGTAAAATCTCCGAAAGAAAAATCCAGATTAGTTTGAGCCCTTCAGAATTTTGTAGAAAGTCCGAAAGAAG TATTAAGAACCAGCATATCT
Product: beta-lactamase domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 280; Mature: 280
Protein sequence:
>280_residues MQLTVLVDNNTIIDRYLIGEPGLSFFLETGGKRILFDTGYSDAFIQNAGKIGINLRVLDYVVLSHGHMDHTWGLDPLIRL YTEAIIENQAGMLKPVVVGHSDVFYSKRLKGMGEIGSTVAKSKLSQHFELKLLKNPLWLTEKLVFLGEIPRTYEFEAKTP LGTVLKKSHEEEDFLLDDTALAYKAKDGLVIIVGCSHSGICNIVEYAKKVCQDERVLDIIGGFHLLSPPRSQMDGVKDYL RTLQPKEVHACHCTDLQAKIELSEVVNLKEVGVGLKLQYD
Sequences:
>Translated_280_residues MQLTVLVDNNTIIDRYLIGEPGLSFFLETGGKRILFDTGYSDAFIQNAGKIGINLRVLDYVVLSHGHMDHTWGLDPLIRL YTEAIIENQAGMLKPVVVGHSDVFYSKRLKGMGEIGSTVAKSKLSQHFELKLLKNPLWLTEKLVFLGEIPRTYEFEAKTP LGTVLKKSHEEEDFLLDDTALAYKAKDGLVIIVGCSHSGICNIVEYAKKVCQDERVLDIIGGFHLLSPPRSQMDGVKDYL RTLQPKEVHACHCTDLQAKIELSEVVNLKEVGVGLKLQYD >Mature_280_residues MQLTVLVDNNTIIDRYLIGEPGLSFFLETGGKRILFDTGYSDAFIQNAGKIGINLRVLDYVVLSHGHMDHTWGLDPLIRL YTEAIIENQAGMLKPVVVGHSDVFYSKRLKGMGEIGSTVAKSKLSQHFELKLLKNPLWLTEKLVFLGEIPRTYEFEAKTP LGTVLKKSHEEEDFLLDDTALAYKAKDGLVIIVGCSHSGICNIVEYAKKVCQDERVLDIIGGFHLLSPPRSQMDGVKDYL RTLQPKEVHACHCTDLQAKIELSEVVNLKEVGVGLKLQYD
Specific function: Unknown
COG id: COG1237
COG function: function code R; Metal-dependent hydrolases of the beta-lactamase superfamily II
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001279 [H]
Pfam domain/function: PF00753 Lactamase_B [H]
EC number: NA
Molecular weight: Translated: 31315; Mature: 31315
Theoretical pI: Translated: 6.35; Mature: 6.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQLTVLVDNNTIIDRYLIGEPGLSFFLETGGKRILFDTGYSDAFIQNAGKIGINLRVLDY CEEEEEECCCEEEEEEEECCCCCEEHEECCCCEEEEECCCCHHHHHCCCCCEEEEEHHHH VVLSHGHMDHTWGLDPLIRLYTEAIIENQAGMLKPVVVGHSDVFYSKRLKGMGEIGSTVA HHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEECCCHHHHHHHHCCCHHHHHHHH KSKLSQHFELKLLKNPLWLTEKLVFLGEIPRTYEFEAKTPLGTVLKKSHEEEDFLLDDTA HHHHHHHHEEHHHCCCHHHHHHHHHHHCCCCCEEECCCCCHHHHHHHCCCCCCEEECCCC LAYKAKDGLVIIVGCSHSGICNIVEYAKKVCQDERVLDIIGGFHLLSPPRSQMDGVKDYL EEEECCCCEEEEEECCCCCHHHHHHHHHHHHCCCHHHHHHCCCCCCCCCHHHHHHHHHHH RTLQPKEVHACHCTDLQAKIELSEVVNLKEVGVGLKLQYD HHCCCCCEEEEEECCCHHEEEHHHHCCHHHHCCCEEEECC >Mature Secondary Structure MQLTVLVDNNTIIDRYLIGEPGLSFFLETGGKRILFDTGYSDAFIQNAGKIGINLRVLDY CEEEEEECCCEEEEEEEECCCCCEEHEECCCCEEEEECCCCHHHHHCCCCCEEEEEHHHH VVLSHGHMDHTWGLDPLIRLYTEAIIENQAGMLKPVVVGHSDVFYSKRLKGMGEIGSTVA HHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEECCCHHHHHHHHCCCHHHHHHHH KSKLSQHFELKLLKNPLWLTEKLVFLGEIPRTYEFEAKTPLGTVLKKSHEEEDFLLDDTA HHHHHHHHEEHHHCCCHHHHHHHHHHHCCCCCEEECCCCCHHHHHHHCCCCCCEEECCCC LAYKAKDGLVIIVGCSHSGICNIVEYAKKVCQDERVLDIIGGFHLLSPPRSQMDGVKDYL EEEECCCCEEEEEECCCCCHHHHHHHHHHHHCCCHHHHHHCCCCCCCCCHHHHHHHHHHH RTLQPKEVHACHCTDLQAKIELSEVVNLKEVGVGLKLQYD HHCCCCCEEEEEECCCHHEEEHHHHCCHHHHCCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]