| Definition | Desulfotomaculum reducens MI-1 chromosome, complete genome. |
|---|---|
| Accession | NC_009253 |
| Length | 3,608,104 |
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The map label for this gene is yieG [C]
Identifier: 134300211
GI number: 134300211
Start: 2596391
End: 2597764
Strand: Reverse
Name: yieG [C]
Synonym: Dred_2372
Alternate gene names: 134300211
Gene position: 2597764-2596391 (Counterclockwise)
Preceding gene: 134300212
Following gene: 134300210
Centisome position: 72.0
GC content: 46.22
Gene sequence:
>1374_bases GTGCTGGAACAGTTATTCAAGCTCAAGGAGAATAAAACCACAGTAAGAACAGAAGTGGTAGCCGGTCTGACAACGTTCAT GACAATGGCCTATATTCTGTTTTTGAACCCCAATATCTTGGCTGGTACTGGGATGGATAAGAACGCGGTATTTTTCGCCA CTGCTATGGCAGGTGCTGTGGTTACCATAGCCATGGGTTTATTTGTCAACTTTCCCATCGCACTGGCCCCGGGTATGGGT CTTAATGCTTATTTTGCTGCAGTTGCTGCCCAAGGACAAGGGATGCCCTGGGAAACAGCACTGGGTGCTGTATTTATTTC TGGTATTATTTTTCTTATATTAACCGTGACCCAGATCCGTCAAATCCTGATGGTTGCTATTCCTAATTCCATGAAGCGAG CTATCACCGTAGGCATTGGTTTATTTATCACCATTATCGGCTTAAAACTTTCTGAAGTGGCCATAGTGAAAGCGGGCCCG GTCATTCCTCCTACCATGGATGCCCTGCAAAAGGGTGGAGTAGCCACTCTGAAGTTCTTTGAATGGAATTCTTTTATTGG TTCTTTCCACAACCCATCCATGGTCTTAACTATTATCGGTCTGATCATTACCGGAATTTTGATGTCAAGGGGAGTAAAGG GGTCCCTGTTAATTGGTATCGTACTGACCACCATCATTGGTATTCCTATGGGAGTTACAGTAATTCCTGAAAACTTTACC CCCTTTGCTATACCTGACCTTAGTCAGGTATATGTGGGCAAATTAGATATTATGGGTGCCTTTGAAATGGGCCTCTGGAC CATTGTATTTACCTTCACCTTTGTGGAGTTGTTTGATACCTTTGGTACTTTGGTAGGCACAGCTGGTAAGGCAGGCCTAC TGGATGAAAATGGGCAATCCCCTAAAATTGGTAAAGCCATGCTGGTGGATGCCCTGGGTGTTTCCTTTGGCGCCTTTATG GGAACCAGTACCGTAACCGCTTACGTGGAAAGTGCTGCTGGTGTTGGAGAAGGTGGTCGTACCGGTTTGACCGCAGTAAC CACCGGCGCCATGTTTTTGCTGGCTCTGGTCATTGCTCCCCTGGCGGGACTAATTCCTAATGCAGCCACCGCCCCAGCCT TAATTATTGTGGGCTTACTGATGGTCTCAGCCATCCGCGAAATTGACTTCGATGACTTTACCGAAGGATTCCCGGCTTTC CTAACATTTGCTTTAATGCCTTTTACCTATAACATTGCCAATGGTATTGCTGCCGGTATCGTTTTCTACACCACTTTAAA AGTAGCATCCGGTCGCGCCAAAGAAGTTCATTGGATGATGTATCTGCTGTTTGTTATTATTGTTGCCCGCTACCTCTTCC TGGGTGGCGAGTAA
Upstream 100 bases:
>100_bases CCCGCCCCCTCTGCATGATAGATTTTCCCGTAGTAAATAATACCTAAGGAAACAAAGCCAATACCACTGGAACTGTCAAT CTAAGGGAGGAAAATTCAAC
Downstream 100 bases:
>100_bases ACCCTAAAAGGAGGGGCTGTTGATGACTGCTTTGGTCGGTATTGTCTTGGGCAGTGACTCGGATCTGCCGCTGATGAAAG ATGCAGTTAAAATATTGGAT
Product: xanthine/uracil/vitamin C permease
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 457; Mature: 457
Protein sequence:
>457_residues MLEQLFKLKENKTTVRTEVVAGLTTFMTMAYILFLNPNILAGTGMDKNAVFFATAMAGAVVTIAMGLFVNFPIALAPGMG LNAYFAAVAAQGQGMPWETALGAVFISGIIFLILTVTQIRQILMVAIPNSMKRAITVGIGLFITIIGLKLSEVAIVKAGP VIPPTMDALQKGGVATLKFFEWNSFIGSFHNPSMVLTIIGLIITGILMSRGVKGSLLIGIVLTTIIGIPMGVTVIPENFT PFAIPDLSQVYVGKLDIMGAFEMGLWTIVFTFTFVELFDTFGTLVGTAGKAGLLDENGQSPKIGKAMLVDALGVSFGAFM GTSTVTAYVESAAGVGEGGRTGLTAVTTGAMFLLALVIAPLAGLIPNAATAPALIIVGLLMVSAIREIDFDDFTEGFPAF LTFALMPFTYNIANGIAAGIVFYTTLKVASGRAKEVHWMMYLLFVIIVARYLFLGGE
Sequences:
>Translated_457_residues MLEQLFKLKENKTTVRTEVVAGLTTFMTMAYILFLNPNILAGTGMDKNAVFFATAMAGAVVTIAMGLFVNFPIALAPGMG LNAYFAAVAAQGQGMPWETALGAVFISGIIFLILTVTQIRQILMVAIPNSMKRAITVGIGLFITIIGLKLSEVAIVKAGP VIPPTMDALQKGGVATLKFFEWNSFIGSFHNPSMVLTIIGLIITGILMSRGVKGSLLIGIVLTTIIGIPMGVTVIPENFT PFAIPDLSQVYVGKLDIMGAFEMGLWTIVFTFTFVELFDTFGTLVGTAGKAGLLDENGQSPKIGKAMLVDALGVSFGAFM GTSTVTAYVESAAGVGEGGRTGLTAVTTGAMFLLALVIAPLAGLIPNAATAPALIIVGLLMVSAIREIDFDDFTEGFPAF LTFALMPFTYNIANGIAAGIVFYTTLKVASGRAKEVHWMMYLLFVIIVARYLFLGGE >Mature_457_residues MLEQLFKLKENKTTVRTEVVAGLTTFMTMAYILFLNPNILAGTGMDKNAVFFATAMAGAVVTIAMGLFVNFPIALAPGMG LNAYFAAVAAQGQGMPWETALGAVFISGIIFLILTVTQIRQILMVAIPNSMKRAITVGIGLFITIIGLKLSEVAIVKAGP VIPPTMDALQKGGVATLKFFEWNSFIGSFHNPSMVLTIIGLIITGILMSRGVKGSLLIGIVLTTIIGIPMGVTVIPENFT PFAIPDLSQVYVGKLDIMGAFEMGLWTIVFTFTFVELFDTFGTLVGTAGKAGLLDENGQSPKIGKAMLVDALGVSFGAFM GTSTVTAYVESAAGVGEGGRTGLTAVTTGAMFLLALVIAPLAGLIPNAATAPALIIVGLLMVSAIREIDFDDFTEGFPAF LTFALMPFTYNIANGIAAGIVFYTTLKVASGRAKEVHWMMYLLFVIIVARYLFLGGE
Specific function: Unknown
COG id: COG2252
COG function: function code R; Permeases
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the xanthine/uracil permease family. AzgA purine transporter (TC 2.A.1.40) subfamily [H]
Homologues:
Organism=Escherichia coli, GI1790150, Length=457, Percent_Identity=42.4507658643326, Blast_Score=346, Evalue=2e-96, Organism=Escherichia coli, GI87082309, Length=454, Percent_Identity=42.2907488986784, Blast_Score=339, Evalue=2e-94, Organism=Escherichia coli, GI1790499, Length=455, Percent_Identity=34.5054945054945, Blast_Score=229, Evalue=3e-61, Organism=Escherichia coli, GI48994909, Length=442, Percent_Identity=34.6153846153846, Blast_Score=199, Evalue=3e-52,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006043 [H]
Pfam domain/function: PF00860 Xan_ur_permease [H]
EC number: NA
Molecular weight: Translated: 48269; Mature: 48269
Theoretical pI: Translated: 5.87; Mature: 5.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 5.0 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 5.0 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLEQLFKLKENKTTVRTEVVAGLTTFMTMAYILFLNPNILAGTGMDKNAVFFATAMAGAV CHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCHHHHHHHHHHHH VTIAMGLFVNFPIALAPGMGLNAYFAAVAAQGQGMPWETALGAVFISGIIFLILTVTQIR HHHHHHHHHCCCHHCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH QILMVAIPNSMKRAITVGIGLFITIIGLKLSEVAIVKAGPVIPPTMDALQKGGVATLKFF HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCHHHHHCCCCEEEEEE EWNSFIGSFHNPSMVLTIIGLIITGILMSRGVKGSLLIGIVLTTIIGIPMGVTVIPENFT EHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCEEECCCCC PFAIPDLSQVYVGKLDIMGAFEMGLWTIVFTFTFVELFDTFGTLVGTAGKAGLLDENGQS CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC PKIGKAMLVDALGVSFGAFMGTSTVTAYVESAAGVGEGGRTGLTAVTTGAMFLLALVIAP CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHH LAGLIPNAATAPALIIVGLLMVSAIREIDFDDFTEGFPAFLTFALMPFTYNIANGIAAGI HHHHCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH VFYTTLKVASGRAKEVHWMMYLLFVIIVARYLFLGGE HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MLEQLFKLKENKTTVRTEVVAGLTTFMTMAYILFLNPNILAGTGMDKNAVFFATAMAGAV CHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCHHHHHHHHHHHH VTIAMGLFVNFPIALAPGMGLNAYFAAVAAQGQGMPWETALGAVFISGIIFLILTVTQIR HHHHHHHHHCCCHHCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH QILMVAIPNSMKRAITVGIGLFITIIGLKLSEVAIVKAGPVIPPTMDALQKGGVATLKFF HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCHHHHHCCCCEEEEEE EWNSFIGSFHNPSMVLTIIGLIITGILMSRGVKGSLLIGIVLTTIIGIPMGVTVIPENFT EHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCEEECCCCC PFAIPDLSQVYVGKLDIMGAFEMGLWTIVFTFTFVELFDTFGTLVGTAGKAGLLDENGQS CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC PKIGKAMLVDALGVSFGAFMGTSTVTAYVESAAGVGEGGRTGLTAVTTGAMFLLALVIAP CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHH LAGLIPNAATAPALIIVGLLMVSAIREIDFDDFTEGFPAFLTFALMPFTYNIANGIAAGI HHHHCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH VFYTTLKVASGRAKEVHWMMYLLFVIIVARYLFLGGE HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]