| Definition | Desulfotomaculum reducens MI-1 chromosome, complete genome. |
|---|---|
| Accession | NC_009253 |
| Length | 3,608,104 |
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The map label for this gene is purM [H]
Identifier: 134300203
GI number: 134300203
Start: 2587839
End: 2588891
Strand: Reverse
Name: purM [H]
Synonym: Dred_2364
Alternate gene names: 134300203
Gene position: 2588891-2587839 (Counterclockwise)
Preceding gene: 134300204
Following gene: 134300202
Centisome position: 71.75
GC content: 51.09
Gene sequence:
>1053_bases ATGACAGAGCAGAAATCACAACCCCTTACCTATGCTGGGGCGGGGGTCAATATCGAAGCAGGAAACCAGGCTGTCAGTCT CATGAAGCAGGCAGTACGTAGCACCTTTCGACCGGAGGTTCTGACGGACATTGGAGGCTTTGGGGGACTCTTTGCTCTCA ATGCCGGTAAATATAAGGAGCCGGTATTGGTTTCCGGTACCGATGGCGTAGGCACCAAATTACGTGTGGCTCAACTAACC GACAATCATCACACCATTGGCATTGATGCCGTGGCCATGTGTGTGAATGATATCTTGGTTCAGGGGGCAGAACCACTGTT TTTTCTGGATTATCTAGCTGTGGGGAAGCTAGTGCCCGAAAGGGTGGCCGAGATTGTAAAGGGTGTGGCCGAAGGTTGCC GCCAGGCCGGTTGTGCCTTAATTGGCGGGGAAACAGCAGAAATGCCGGGTTTTTATGCAGTAGAAGAATATGACATTGCC GGCTTTGCCGTAGGCGTTGTGGAGCGTACGCAGTTAATTGATGGTAGAGGTATTGAAGCAGGGGATGCTGTAATTGGTCT TCCTTCTTCAGGTCTCCATAGCAATGGTTATTCCTTGGCCCGGAAGGCCCTGCTGGAGGTAGCAGGTTACGGGATGACCG ATACCGTAAAAGAGCTGGGCCGTTCTGTTGGGGAAGAATTACTGGAACCCACACGTATCTATGTCAAGGCAGTTCAACCG CTGCTGGAAAAGTTTACTGTCAAGGGAATGGCCCATATTACCGGCGGTGGCTTAACTGAAAATATTCCCCGTATGTTGCC CGAAGGGGTCAAGGTGGTACTGAACCGTTCCGCTTGGCCGGTATTGCCCGTATGCCAGCTAATTCAACAGATTGGCCAGG TAGCAGAAGAGGAAATGCTGCGTACCTTTAATATGGGAATCGGCATGGTATTGATTGTACCCGCAGCAGAGTCAGCGGCG GTGCTGCAGGATTTAGCCAGCCGTCATGAACAGGCCTATCTGATTGGACAGGTGGAAAGTGGTCCTTCACAAGTTGAATA TATACAGGGTTAA
Upstream 100 bases:
>100_bases AAAGAACTTCTGTACCGCATGTTTCAACGGCATTTACCCGGTGGAAGTGCCCAAACAGACGCAGGGCGGTAAGTTCAGTC TGGAATAAGGGAGTGTGTCC
Downstream 100 bases:
>100_bases AGATCAGCCTTAGGGAGAAATCTTATGAATAAATTACGGATAGGGGTATTGGCTTCGGGGCGGGGTTCCAATTTGCAGTC CATCCTGGATCGCTGCCAGG
Product: phosphoribosylaminoimidazole synthetase
Products: NA
Alternate protein names: AIR synthase; AIRS; Phosphoribosyl-aminoimidazole synthetase [H]
Number of amino acids: Translated: 350; Mature: 349
Protein sequence:
>350_residues MTEQKSQPLTYAGAGVNIEAGNQAVSLMKQAVRSTFRPEVLTDIGGFGGLFALNAGKYKEPVLVSGTDGVGTKLRVAQLT DNHHTIGIDAVAMCVNDILVQGAEPLFFLDYLAVGKLVPERVAEIVKGVAEGCRQAGCALIGGETAEMPGFYAVEEYDIA GFAVGVVERTQLIDGRGIEAGDAVIGLPSSGLHSNGYSLARKALLEVAGYGMTDTVKELGRSVGEELLEPTRIYVKAVQP LLEKFTVKGMAHITGGGLTENIPRMLPEGVKVVLNRSAWPVLPVCQLIQQIGQVAEEEMLRTFNMGIGMVLIVPAAESAA VLQDLASRHEQAYLIGQVESGPSQVEYIQG
Sequences:
>Translated_350_residues MTEQKSQPLTYAGAGVNIEAGNQAVSLMKQAVRSTFRPEVLTDIGGFGGLFALNAGKYKEPVLVSGTDGVGTKLRVAQLT DNHHTIGIDAVAMCVNDILVQGAEPLFFLDYLAVGKLVPERVAEIVKGVAEGCRQAGCALIGGETAEMPGFYAVEEYDIA GFAVGVVERTQLIDGRGIEAGDAVIGLPSSGLHSNGYSLARKALLEVAGYGMTDTVKELGRSVGEELLEPTRIYVKAVQP LLEKFTVKGMAHITGGGLTENIPRMLPEGVKVVLNRSAWPVLPVCQLIQQIGQVAEEEMLRTFNMGIGMVLIVPAAESAA VLQDLASRHEQAYLIGQVESGPSQVEYIQG >Mature_349_residues TEQKSQPLTYAGAGVNIEAGNQAVSLMKQAVRSTFRPEVLTDIGGFGGLFALNAGKYKEPVLVSGTDGVGTKLRVAQLTD NHHTIGIDAVAMCVNDILVQGAEPLFFLDYLAVGKLVPERVAEIVKGVAEGCRQAGCALIGGETAEMPGFYAVEEYDIAG FAVGVVERTQLIDGRGIEAGDAVIGLPSSGLHSNGYSLARKALLEVAGYGMTDTVKELGRSVGEELLEPTRIYVKAVQPL LEKFTVKGMAHITGGGLTENIPRMLPEGVKVVLNRSAWPVLPVCQLIQQIGQVAEEEMLRTFNMGIGMVLIVPAAESAAV LQDLASRHEQAYLIGQVESGPSQVEYIQG
Specific function: De novo purine biosynthesis; fifth step. [C]
COG id: COG0150
COG function: function code F; Phosphoribosylaminoimidazole (AIR) synthetase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the AIR synthase family [H]
Homologues:
Organism=Homo sapiens, GI4503915, Length=337, Percent_Identity=50.4451038575668, Blast_Score=327, Evalue=1e-89, Organism=Homo sapiens, GI209869995, Length=337, Percent_Identity=50.4451038575668, Blast_Score=327, Evalue=1e-89, Organism=Homo sapiens, GI209869993, Length=337, Percent_Identity=50.4451038575668, Blast_Score=327, Evalue=1e-89, Organism=Escherichia coli, GI1788845, Length=344, Percent_Identity=53.1976744186046, Blast_Score=354, Evalue=5e-99, Organism=Caenorhabditis elegans, GI17567511, Length=341, Percent_Identity=45.1612903225806, Blast_Score=267, Evalue=7e-72, Organism=Saccharomyces cerevisiae, GI6321203, Length=347, Percent_Identity=46.9740634005764, Blast_Score=305, Evalue=5e-84, Organism=Drosophila melanogaster, GI24582400, Length=287, Percent_Identity=46.6898954703833, Blast_Score=244, Evalue=9e-65,
Paralogues:
None
Copy number: 180 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000728 - InterPro: IPR010918 - InterPro: IPR004733 - InterPro: IPR016188 [H]
Pfam domain/function: PF00586 AIRS; PF02769 AIRS_C [H]
EC number: =6.3.3.1 [H]
Molecular weight: Translated: 37094; Mature: 36963
Theoretical pI: Translated: 4.65; Mature: 4.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTEQKSQPLTYAGAGVNIEAGNQAVSLMKQAVRSTFRPEVLTDIGGFGGLFALNAGKYKE CCCCCCCCCEEECCCCEECCCHHHHHHHHHHHHHHCCCHHHHHCCCCCCEEEECCCCCCC PVLVSGTDGVGTKLRVAQLTDNHHTIGIDAVAMCVNDILVQGAEPLFFLDYLAVGKLVPE CEEEECCCCCCCEEEEEEECCCCCEEHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH RVAEIVKGVAEGCRQAGCALIGGETAEMPGFYAVEEYDIAGFAVGVVERTQLIDGRGIEA HHHHHHHHHHHHHHHCCCEEECCCCCCCCCEEEEECCCCCHHHHHHHHHHHHCCCCCCCC GDAVIGLPSSGLHSNGYSLARKALLEVAGYGMTDTVKELGRSVGEELLEPTRIYVKAVQP CCEEEECCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH LLEKFTVKGMAHITGGGLTENIPRMLPEGVKVVLNRSAWPVLPVCQLIQQIGQVAEEEML HHHHHHHCCHHEECCCCCHHHHHHHCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHH RTFNMGIGMVLIVPAAESAAVLQDLASRHEQAYLIGQVESGPSQVEYIQG HHHHCCCCEEEEEECCCHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCC >Mature Secondary Structure TEQKSQPLTYAGAGVNIEAGNQAVSLMKQAVRSTFRPEVLTDIGGFGGLFALNAGKYKE CCCCCCCCEEECCCCEECCCHHHHHHHHHHHHHHCCCHHHHHCCCCCCEEEECCCCCCC PVLVSGTDGVGTKLRVAQLTDNHHTIGIDAVAMCVNDILVQGAEPLFFLDYLAVGKLVPE CEEEECCCCCCCEEEEEEECCCCCEEHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH RVAEIVKGVAEGCRQAGCALIGGETAEMPGFYAVEEYDIAGFAVGVVERTQLIDGRGIEA HHHHHHHHHHHHHHHCCCEEECCCCCCCCCEEEEECCCCCHHHHHHHHHHHHCCCCCCCC GDAVIGLPSSGLHSNGYSLARKALLEVAGYGMTDTVKELGRSVGEELLEPTRIYVKAVQP CCEEEECCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH LLEKFTVKGMAHITGGGLTENIPRMLPEGVKVVLNRSAWPVLPVCQLIQQIGQVAEEEML HHHHHHHCCHHEECCCCCHHHHHHHCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHH RTFNMGIGMVLIVPAAESAAVLQDLASRHEQAYLIGQVESGPSQVEYIQG HHHHCCCCEEEEEECCCHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA