Click here to switch to the map view.

The map label for this gene is wcaL [C]

Identifier: 134300174

GI number: 134300174

Start: 2553217

End: 2554449

Strand: Reverse

Name: wcaL [C]

Synonym: Dred_2335

Alternate gene names: 134300174

Gene position: 2554449-2553217 (Counterclockwise)

Preceding gene: 134300175

Following gene: 134300173

Centisome position: 70.8

GC content: 42.58

Gene sequence:

>1233_bases
TTGAGGGTTGTCACTTTTTCCTGGGAATACCCGCCCTTAAGTGTGGGAGGGTTAGCTCAGCATGTCTATGATTTAACCAT
TGCAATGGCTAGACAGGATGTAGACCTTCATGTAATAACCTGCGGGAGCCCAGATACACCAGATTATGAAAAAATACAGG
GTGTGCATGTATATCGGGTTACTTCTTTTAAGGTTTCTTCCCCGGATTTTGTTACCTGGGTTATGCAGTTAAACATGGCT
ATGATTGAAAGGTTTATTACCTTATTTCATGAACTGGAGCAGGTTGATATCATACATGCCCACGATTGGTTGGTGGCCTA
TGCGGCCAAGGTTTGTAAACATTCCCACAAGATCCCCCTGATATCCACTATCCATGCCACTGAGTGGGGACGGAATAACG
GATTACATAATGATATTCAAAGGCACATCAGTGATATCGAATGGTGGCTAACCTATGAATCCTGGCGCGTCATTTGCTGC
AGTGAATACATGCAAGGGCAGTTAACCCATATTTTTCAACTACCCGTAGATAAAATAAATATTATACCCAACGGAGTAGA
ACCCACAAACTTTAAATTTGACCCTAAGACACCTGTCAAGCGAGATACCTTTGCTAATCCCCATGAGAAAATTGTTTATT
ATGTGGGCAGGTTGGTACCTGAGAAAGGTGTACAGGTACTACTGGAGGCGGTTCCAAAGATATTACATTATCATCCTAAC
ACCAAATTTGTCATAGCAGGAAAGGGGTCATTTGAGGGGGAGCTTAAGCATAAAGCTGTACAAATAGGGATTTCAGATAA
AATCTATTTTACAGGTTATGTAAATGATATGACTCGAAATAGCCTATATCATTATGCGGATGTAGCAGTATTCCCAAGTT
TATACGAGCCCTTTGGTATTGTGGCCCTGGAAGCAATGGCCGCCCAGACCCCTGTGGTGGTCTCTGACAATGGAGGTCTG
GGTGAAATTGTCCAACACGGGTTCAATGGCATGAAGTCCTATACAGGTAATGCCAATTCCTTGGCAGACAGCATATTGCA
TTGCCTGATGGATAACAATTCTGCTCGGCAAATGAAAGAGCGGGCTTACAATGATGTGATCAAAAAATATAATTGGCAAG
GTATTGCCAAACAAACCAGACAGGTATATCAGGAGATCATTGATGCGGACCAAAAAGCTCCCTGGAAAAAAGAAAAATTA
ATAGGCAAGGTTGTTCGGACAGTGGCCCACTAA

Upstream 100 bases:

>100_bases
TTTTATTGTACTAAAGAGTTTTCCTGAACATAAAAAGCACATAAATGGTAAATACTAGCCAGTAATCTAGGTCTAATTTA
CCAGAAGGGTGCGTGAAGAA

Downstream 100 bases:

>100_bases
GGGATAGAGCATGGGAAGGAGTGATATTATGAAGGCTATTATTATGGCTGGTGGCGAAGGTACCCGGTTAAGGCCATTAA
CCTGTGGTTTGCCGAAACCC

Product: group 1 glycosyl transferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 410; Mature: 410

Protein sequence:

>410_residues
MRVVTFSWEYPPLSVGGLAQHVYDLTIAMARQDVDLHVITCGSPDTPDYEKIQGVHVYRVTSFKVSSPDFVTWVMQLNMA
MIERFITLFHELEQVDIIHAHDWLVAYAAKVCKHSHKIPLISTIHATEWGRNNGLHNDIQRHISDIEWWLTYESWRVICC
SEYMQGQLTHIFQLPVDKINIIPNGVEPTNFKFDPKTPVKRDTFANPHEKIVYYVGRLVPEKGVQVLLEAVPKILHYHPN
TKFVIAGKGSFEGELKHKAVQIGISDKIYFTGYVNDMTRNSLYHYADVAVFPSLYEPFGIVALEAMAAQTPVVVSDNGGL
GEIVQHGFNGMKSYTGNANSLADSILHCLMDNNSARQMKERAYNDVIKKYNWQGIAKQTRQVYQEIIDADQKAPWKKEKL
IGKVVRTVAH

Sequences:

>Translated_410_residues
MRVVTFSWEYPPLSVGGLAQHVYDLTIAMARQDVDLHVITCGSPDTPDYEKIQGVHVYRVTSFKVSSPDFVTWVMQLNMA
MIERFITLFHELEQVDIIHAHDWLVAYAAKVCKHSHKIPLISTIHATEWGRNNGLHNDIQRHISDIEWWLTYESWRVICC
SEYMQGQLTHIFQLPVDKINIIPNGVEPTNFKFDPKTPVKRDTFANPHEKIVYYVGRLVPEKGVQVLLEAVPKILHYHPN
TKFVIAGKGSFEGELKHKAVQIGISDKIYFTGYVNDMTRNSLYHYADVAVFPSLYEPFGIVALEAMAAQTPVVVSDNGGL
GEIVQHGFNGMKSYTGNANSLADSILHCLMDNNSARQMKERAYNDVIKKYNWQGIAKQTRQVYQEIIDADQKAPWKKEKL
IGKVVRTVAH
>Mature_410_residues
MRVVTFSWEYPPLSVGGLAQHVYDLTIAMARQDVDLHVITCGSPDTPDYEKIQGVHVYRVTSFKVSSPDFVTWVMQLNMA
MIERFITLFHELEQVDIIHAHDWLVAYAAKVCKHSHKIPLISTIHATEWGRNNGLHNDIQRHISDIEWWLTYESWRVICC
SEYMQGQLTHIFQLPVDKINIIPNGVEPTNFKFDPKTPVKRDTFANPHEKIVYYVGRLVPEKGVQVLLEAVPKILHYHPN
TKFVIAGKGSFEGELKHKAVQIGISDKIYFTGYVNDMTRNSLYHYADVAVFPSLYEPFGIVALEAMAAQTPVVVSDNGGL
GEIVQHGFNGMKSYTGNANSLADSILHCLMDNNSARQMKERAYNDVIKKYNWQGIAKQTRQVYQEIIDADQKAPWKKEKL
IGKVVRTVAH

Specific function: Slime polysaccharide colanic acid biosynthesis. [C]

COG id: COG0438

COG function: function code M; Glycosyltransferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 1 family [H]

Homologues:

Organism=Homo sapiens, GI11863130, Length=411, Percent_Identity=21.8978102189781, Blast_Score=76, Evalue=7e-14,
Organism=Caenorhabditis elegans, GI17532709, Length=246, Percent_Identity=24.390243902439, Blast_Score=82, Evalue=7e-16,
Organism=Saccharomyces cerevisiae, GI9755344, Length=384, Percent_Identity=26.0416666666667, Blast_Score=96, Evalue=1e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001296
- InterPro:   IPR013534 [H]

Pfam domain/function: PF08323 Glyco_transf_5; PF00534 Glycos_transf_1 [H]

EC number: 2.-.-.- [C]

Molecular weight: Translated: 46724; Mature: 46724

Theoretical pI: Translated: 7.36; Mature: 7.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRVVTFSWEYPPLSVGGLAQHVYDLTIAMARQDVDLHVITCGSPDTPDYEKIQGVHVYRV
CEEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCHHHHCCEEEEEE
TSFKVSSPDFVTWVMQLNMAMIERFITLFHELEQVDIIHAHDWLVAYAAKVCKHSHKIPL
EEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEHHHHHHHHHHHHHHCCCCCCE
ISTIHATEWGRNNGLHNDIQRHISDIEWWLTYESWRVICCSEYMQGQLTHIFQLPVDKIN
EEEEECCCCCCCCCCHHHHHHHHHHHEEEEEECCCEEEEEHHHHCCHHHHHEECCCCCEE
IIPNGVEPTNFKFDPKTPVKRDTFANPHEKIVYYVGRLVPEKGVQVLLEAVPKILHYHPN
ECCCCCCCCCEEECCCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHEECCC
TKFVIAGKGSFEGELKHKAVQIGISDKIYFTGYVNDMTRNSLYHYADVAVFPSLYEPFGI
CEEEEEECCCCCCCCCEEEEEEECCCEEEEEEECCCHHHCCHHHHHHHHHHHHHHCCHHH
VALEAMAAQTPVVVSDNGGLGEIVQHGFNGMKSYTGNANSLADSILHCLMDNNSARQMKE
HHHHHHHCCCCEEEECCCCHHHHHHHCCCHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHH
RAYNDVIKKYNWQGIAKQTRQVYQEIIDADQKAPWKKEKLIGKVVRTVAH
HHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCC
>Mature Secondary Structure
MRVVTFSWEYPPLSVGGLAQHVYDLTIAMARQDVDLHVITCGSPDTPDYEKIQGVHVYRV
CEEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCHHHHCCEEEEEE
TSFKVSSPDFVTWVMQLNMAMIERFITLFHELEQVDIIHAHDWLVAYAAKVCKHSHKIPL
EEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEHHHHHHHHHHHHHHCCCCCCE
ISTIHATEWGRNNGLHNDIQRHISDIEWWLTYESWRVICCSEYMQGQLTHIFQLPVDKIN
EEEEECCCCCCCCCCHHHHHHHHHHHEEEEEECCCEEEEEHHHHCCHHHHHEECCCCCEE
IIPNGVEPTNFKFDPKTPVKRDTFANPHEKIVYYVGRLVPEKGVQVLLEAVPKILHYHPN
ECCCCCCCCCEEECCCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHEECCC
TKFVIAGKGSFEGELKHKAVQIGISDKIYFTGYVNDMTRNSLYHYADVAVFPSLYEPFGI
CEEEEEECCCCCCCCCEEEEEEECCCEEEEEEECCCHHHCCHHHHHHHHHHHHHHCCHHH
VALEAMAAQTPVVVSDNGGLGEIVQHGFNGMKSYTGNANSLADSILHCLMDNNSARQMKE
HHHHHHHCCCCEEEECCCCHHHHHHHCCCHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHH
RAYNDVIKKYNWQGIAKQTRQVYQEIIDADQKAPWKKEKLIGKVVRTVAH
HHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]