| Definition | Desulfotomaculum reducens MI-1 chromosome, complete genome. |
|---|---|
| Accession | NC_009253 |
| Length | 3,608,104 |
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The map label for this gene is 134300159
Identifier: 134300159
GI number: 134300159
Start: 2539408
End: 2540097
Strand: Reverse
Name: 134300159
Synonym: Dred_2320
Alternate gene names: NA
Gene position: 2540097-2539408 (Counterclockwise)
Preceding gene: 134300160
Following gene: 134300158
Centisome position: 70.4
GC content: 42.61
Gene sequence:
>690_bases ATGCAAGCAACTATGGAAATGATTTTTCAAGCAAAAGTAACCTGCCCAAATTGCGGACAAGACTTTCTCCATCCTGAAGT GAAAAGTAAATATATTTCACTGGAAAAACAGGACAGTGACTTTTGTGGTTATTATAATGGCATTAATCCTATTTTTTATG ATGTTATGGTTTGTCGTCATTGTGGTTTTGGTTTTACCAAAGAAACCAATCGTCCTCTGGATGAAGCTGAAAAAATGTCC ATTAATACTATATTGTCCAGTTGGCATAATGACGGAGCTCAGTACAGTGGACTACGAACACTGGAACAGGCAATCAAGGC ATACAACAAGGCCATTTTATGCCAGGAGCTAAGAAATGCCAAGGATTCTGTGAAGGGTTCTTTGTACCTGCGATTGGGCT GGCTCTATCGCTATCAGGGCAATAAAAATAATGAAGAGCAGGCTCTGCGCCGAACATTGGAGTTTCTAAGGCGTGCCTAT GAAAGAGAATCTTCCTCAGATGCAAAAAAAGAATTACGCATGATCTATCTTATCGGGGAATTGTCTTACCGCAATGGTGA TCTTAAGGACGCCATCAAATGGTTTCAGGCTGTGACCACCCACCCAGAGGCGGATCGTTACCCAGTCTTTAATAGGTTGG CCAGATCTCGCTGGCAGGATATCCGGGAGGAAGCCAAGCAAAAGGGGTAA
Upstream 100 bases:
>100_bases GAGGTAGGAGGTATCTTTAGGTAATTGTTGAAAAAATATCCTAACCAGTTAATTATTTGGTATAATAATGGTAGAACTTC ATGTGCGGGAGCGTAAGAAT
Downstream 100 bases:
>100_bases CTTAACTAACTTTATAGCGTTTTTGATGACACCGGGAAACCGGTGTCTTTTGTGTGGTATGTCCGGAGCCCTTTTAGTTT AATCTGCAAACTTACAGCTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 229; Mature: 229
Protein sequence:
>229_residues MQATMEMIFQAKVTCPNCGQDFLHPEVKSKYISLEKQDSDFCGYYNGINPIFYDVMVCRHCGFGFTKETNRPLDEAEKMS INTILSSWHNDGAQYSGLRTLEQAIKAYNKAILCQELRNAKDSVKGSLYLRLGWLYRYQGNKNNEEQALRRTLEFLRRAY ERESSSDAKKELRMIYLIGELSYRNGDLKDAIKWFQAVTTHPEADRYPVFNRLARSRWQDIREEAKQKG
Sequences:
>Translated_229_residues MQATMEMIFQAKVTCPNCGQDFLHPEVKSKYISLEKQDSDFCGYYNGINPIFYDVMVCRHCGFGFTKETNRPLDEAEKMS INTILSSWHNDGAQYSGLRTLEQAIKAYNKAILCQELRNAKDSVKGSLYLRLGWLYRYQGNKNNEEQALRRTLEFLRRAY ERESSSDAKKELRMIYLIGELSYRNGDLKDAIKWFQAVTTHPEADRYPVFNRLARSRWQDIREEAKQKG >Mature_229_residues MQATMEMIFQAKVTCPNCGQDFLHPEVKSKYISLEKQDSDFCGYYNGINPIFYDVMVCRHCGFGFTKETNRPLDEAEKMS INTILSSWHNDGAQYSGLRTLEQAIKAYNKAILCQELRNAKDSVKGSLYLRLGWLYRYQGNKNNEEQALRRTLEFLRRAY ERESSSDAKKELRMIYLIGELSYRNGDLKDAIKWFQAVTTHPEADRYPVFNRLARSRWQDIREEAKQKG
Specific function: Unknown
COG id: COG1655
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26786; Mature: 26786
Theoretical pI: Translated: 8.73; Mature: 8.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQATMEMIFQAKVTCPNCGQDFLHPEVKSKYISLEKQDSDFCGYYNGINPIFYDVMVCRH CCHHHHHHHHHHCCCCCCCHHHCCHHHHHHHHCCCCCCCCHHHHHCCCCHHHHHHHHHHH CGFGFTKETNRPLDEAEKMSINTILSSWHNDGAQYSGLRTLEQAIKAYNKAILCQELRNA CCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH KDSVKGSLYLRLGWLYRYQGNKNNEEQALRRTLEFLRRAYERESSSDAKKELRMIYLIGE HHHHCCEEEEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHEEEH LSYRNGDLKDAIKWFQAVTTHPEADRYPVFNRLARSRWQDIREEAKQKG HCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MQATMEMIFQAKVTCPNCGQDFLHPEVKSKYISLEKQDSDFCGYYNGINPIFYDVMVCRH CCHHHHHHHHHHCCCCCCCHHHCCHHHHHHHHCCCCCCCCHHHHHCCCCHHHHHHHHHHH CGFGFTKETNRPLDEAEKMSINTILSSWHNDGAQYSGLRTLEQAIKAYNKAILCQELRNA CCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH KDSVKGSLYLRLGWLYRYQGNKNNEEQALRRTLEFLRRAYERESSSDAKKELRMIYLIGE HHHHCCEEEEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHEEEH LSYRNGDLKDAIKWFQAVTTHPEADRYPVFNRLARSRWQDIREEAKQKG HCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA