Definition Desulfotomaculum reducens MI-1 chromosome, complete genome.
Accession NC_009253
Length 3,608,104

Click here to switch to the map view.

The map label for this gene is 134300083

Identifier: 134300083

GI number: 134300083

Start: 2451227

End: 2452279

Strand: Reverse

Name: 134300083

Synonym: Dred_2241

Alternate gene names: NA

Gene position: 2452279-2451227 (Counterclockwise)

Preceding gene: 134300084

Following gene: 134300082

Centisome position: 67.97

GC content: 43.59

Gene sequence:

>1053_bases
ATGACTGAGCGGGCGAAGAAAGATGCCACTAAGGGTTTACGACTAAATATGATAATCGACCTTATTAATAAAAGAACACC
CTATGGCGGGGTTACCGTTAATGAACTAATGGATAAATTTGAGGTTGCTGAGCGGCAGGTGTATAGGGATTTAAATACCA
TTGCGAATGATCTGAGGGTTCCCCTGGTAAAACAGGAGCGGCATATTGAAGGGATTAAGAAAACCTGTTACTGCCTAGAA
GTTGGCTATTTACCCAGCCTTAGTCCGGAAAAGGCTACAGTATTATTTTTGAGCTTGCTGCAGCAGAAGGGTTCTGCCTT
GACTGGTCATTTAAATGAACTAAAGGATGCCCTGGTTTCCACTTTATTTAAGTATCATTACAATCCCAAAGAATTAGCGG
TGGAAAAGCTGCAGAATCGTATCCACCTGGTGGAGGAAACCCTGGTGGAGCCGGAACAGGTAGGTGAGATGTTTTCAAAG
CTAGTCCAGGCCTTGAAGGTTTGTTATCGGGTGAAAATTAAATATTTTGTTACTCACAGCCAGAAAGAGACTGAACGGGT
AGTGGAACCCTATGGCCTGATTTGTAAAAGGCAGAATTGGTATCTGGTTGGTCAGTGTCTTGAACGGAATGCCATTCGTG
TTTTCCGGGTTGATCAAATTAGAGATGTATTTCCGTATACTTCCGAAACCTTCCAGTACCCCACTGATTTTGATTTAAAG
GAATATATGGCCCATAGCTGGGGTGTGATGAATGACGGAGAGGTATGTCAGATTAGGCTAAAGTTTAACCACCGTGTAGC
TCACCGGGTAAAAAATTTGATATATCACCCATCGCAGGTTTTGGAAGAAGAGCTACCGGATGGGTCTATCATTGTTGGCT
TTAGGGTTTGCGGTATAACAGAAATGAAGACATGGCTTGTCCAATGGGGAGATACAGTGGAAGTGCTGGAGCCGGGTTGG
TTAAGGGAAGATATGTGTAAGTTGGCGGAGGGGATTTTGCGGGTTTATCAAGGTGAACTAGGAGATTTTAGTAATAGGAA
GGTGGAAGCATGA

Upstream 100 bases:

>100_bases
CTGTGGTTGATTTAGGTTAATTGCTAGAGGTTTTTGTATTATCCTGCCGAACTTAGATATTAGAAAATACCTTATTAGAA
TAGGGCAGGAGGTTCTAATA

Downstream 100 bases:

>100_bases
TGGGTAATATCGTTGATACCCTATGTGATATTAATATTGCAGTTGTTAAAAACCTGTGTGCCGTACAGGATTGTAGTATA
ACAGTACTGCGGCGTCCCCC

Product: transcriptional regulator-like protein

Products: NA

Alternate protein names: Transcriptional Regulator; Regulatory Protein DeoR; Transcriptional Regulator-Like Protein; DeoR Family Transcriptional Regulator; HTH Domain Protein; GntR Family Transcriptional Regulator; HTH Domain Family; Transcriptional Regulator Protein-Like Protein; DeoR-Family Transcriptional Regulator; DNA-Bind Protein; Transcriptional Regulator Protein; Regulatory Protein Deor; Transcription Regulator; HTH-Type Transcriptional Regulator YobV; Helix-Turn-Helix Transcriptional Regulator; Transcriptional Regulator-Like

Number of amino acids: Translated: 350; Mature: 349

Protein sequence:

>350_residues
MTERAKKDATKGLRLNMIIDLINKRTPYGGVTVNELMDKFEVAERQVYRDLNTIANDLRVPLVKQERHIEGIKKTCYCLE
VGYLPSLSPEKATVLFLSLLQQKGSALTGHLNELKDALVSTLFKYHYNPKELAVEKLQNRIHLVEETLVEPEQVGEMFSK
LVQALKVCYRVKIKYFVTHSQKETERVVEPYGLICKRQNWYLVGQCLERNAIRVFRVDQIRDVFPYTSETFQYPTDFDLK
EYMAHSWGVMNDGEVCQIRLKFNHRVAHRVKNLIYHPSQVLEEELPDGSIIVGFRVCGITEMKTWLVQWGDTVEVLEPGW
LREDMCKLAEGILRVYQGELGDFSNRKVEA

Sequences:

>Translated_350_residues
MTERAKKDATKGLRLNMIIDLINKRTPYGGVTVNELMDKFEVAERQVYRDLNTIANDLRVPLVKQERHIEGIKKTCYCLE
VGYLPSLSPEKATVLFLSLLQQKGSALTGHLNELKDALVSTLFKYHYNPKELAVEKLQNRIHLVEETLVEPEQVGEMFSK
LVQALKVCYRVKIKYFVTHSQKETERVVEPYGLICKRQNWYLVGQCLERNAIRVFRVDQIRDVFPYTSETFQYPTDFDLK
EYMAHSWGVMNDGEVCQIRLKFNHRVAHRVKNLIYHPSQVLEEELPDGSIIVGFRVCGITEMKTWLVQWGDTVEVLEPGW
LREDMCKLAEGILRVYQGELGDFSNRKVEA
>Mature_349_residues
TERAKKDATKGLRLNMIIDLINKRTPYGGVTVNELMDKFEVAERQVYRDLNTIANDLRVPLVKQERHIEGIKKTCYCLEV
GYLPSLSPEKATVLFLSLLQQKGSALTGHLNELKDALVSTLFKYHYNPKELAVEKLQNRIHLVEETLVEPEQVGEMFSKL
VQALKVCYRVKIKYFVTHSQKETERVVEPYGLICKRQNWYLVGQCLERNAIRVFRVDQIRDVFPYTSETFQYPTDFDLKE
YMAHSWGVMNDGEVCQIRLKFNHRVAHRVKNLIYHPSQVLEEELPDGSIIVGFRVCGITEMKTWLVQWGDTVEVLEPGWL
REDMCKLAEGILRVYQGELGDFSNRKVEA

Specific function: Unknown

COG id: COG2378

COG function: function code K; Predicted transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 40649; Mature: 40517

Theoretical pI: Translated: 7.50; Mature: 7.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTERAKKDATKGLRLNMIIDLINKRTPYGGVTVNELMDKFEVAERQVYRDLNTIANDLRV
CCCCHHHHHHCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PLVKQERHIEGIKKTCYCLEVGYLPSLSPEKATVLFLSLLQQKGSALTGHLNELKDALVS
CHHHHHHHHHHHHHHHHHEEECCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
TLFKYHYNPKELAVEKLQNRIHLVEETLVEPEQVGEMFSKLVQALKVCYRVKIKYFVTHS
HHHHHCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHEEEECC
QKETERVVEPYGLICKRQNWYLVGQCLERNAIRVFRVDQIRDVFPYTSETFQYPTDFDLK
HHHHHHHHCCHHHEEECCCCEEHHHHHCCCCEEEEEHHHHHHHCCCCCCCCCCCCCCCHH
EYMAHSWGVMNDGEVCQIRLKFNHRVAHRVKNLIYHPSQVLEEELPDGSIIVGFRVCGIT
HHHHHHCCCCCCCCEEEEEEECCHHHHHHHHHHHCCCHHHHHHHCCCCCEEEEEEECCHH
EMKTWLVQWGDTVEVLEPGWLREDMCKLAEGILRVYQGELGDFSNRKVEA
HHHHHHHHCCCCHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
>Mature Secondary Structure 
TERAKKDATKGLRLNMIIDLINKRTPYGGVTVNELMDKFEVAERQVYRDLNTIANDLRV
CCCHHHHHHCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PLVKQERHIEGIKKTCYCLEVGYLPSLSPEKATVLFLSLLQQKGSALTGHLNELKDALVS
CHHHHHHHHHHHHHHHHHEEECCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
TLFKYHYNPKELAVEKLQNRIHLVEETLVEPEQVGEMFSKLVQALKVCYRVKIKYFVTHS
HHHHHCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHEEEECC
QKETERVVEPYGLICKRQNWYLVGQCLERNAIRVFRVDQIRDVFPYTSETFQYPTDFDLK
HHHHHHHHCCHHHEEECCCCEEHHHHHCCCCEEEEEHHHHHHHCCCCCCCCCCCCCCCHH
EYMAHSWGVMNDGEVCQIRLKFNHRVAHRVKNLIYHPSQVLEEELPDGSIIVGFRVCGIT
HHHHHHCCCCCCCCEEEEEEECCHHHHHHHHHHHCCCHHHHHHHCCCCCEEEEEEECCHH
EMKTWLVQWGDTVEVLEPGWLREDMCKLAEGILRVYQGELGDFSNRKVEA
HHHHHHHHCCCCHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA