| Definition | Desulfotomaculum reducens MI-1 chromosome, complete genome. |
|---|---|
| Accession | NC_009253 |
| Length | 3,608,104 |
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The map label for this gene is braC [H]
Identifier: 134300082
GI number: 134300082
Start: 2448829
End: 2450013
Strand: Reverse
Name: braC [H]
Synonym: Dred_2240
Alternate gene names: 134300082
Gene position: 2450013-2448829 (Counterclockwise)
Preceding gene: 134300083
Following gene: 134300081
Centisome position: 67.9
GC content: 41.27
Gene sequence:
>1185_bases ATGAAAAAACATTTTAGATTAGCCGCCTTGCTAGTAGCCCTAGTCATGCTAGCCGGATTGGTTAGTGGATGTGGCGGCGG CGGAGAAGAAAAGAAAGCAGCCGATGCCAATGAAATCGTCATTGGTGGTAACCTTGAATTGAGCGGTCCTGTTGCTACCT TCGGTACAGCCATGAAAAATGGCGCCGAGATGTATTTTGAAGAAGTAAATGCTGCTGGTGGAGTTCTTGGAAAGAAAATT AAGTTTAATGTTATGGATAATAAATCAGATGCAACAGAAGCTGCGAACGTAGCAACTCGCTTAATTACCCAAGACAAAGT AGTAGCAGTAATGGGTGCTGCAACTTCCGGCAATACCATGGGTTTTATGCAAGTGGCTACAGATAACAAAGTTCCCATTA TCACTCCCTCTGGTACTGCCTTGGAAGTAACCGTTGATCCTAACACTAAAAAGGTTCGCGACTATGTTTTTCGTACCTGC TTTATCGATCCTTTCCAAGGCATTGTAATGGCTAACTTTGCCACTAACGATTTGAAAGCTAAGACAGCTGTTCTTTATGT TGATAACCAGTCTCCCTATGCCAAAGGTCTGGCCCAGTTCTTTAAAGATTCCTTCATTAAACAAGGTGGCAAAATTGTTG GTGAGGAAGCCTTTATGCCAGAAGACCAAGATTTTAAAGCAACTTTAACAAAAATAAAAGGTTTAAATCCAGATGTAATC TATGTTCCTGCTTATTATGAGCCAGTAGGTAAGATCGTTAAGCAAGGTAGAGAAATTGGTATTACAGTTCCCTTCCTGGG TGGCGACGGTTGGGATTCTCCTAAATTACCGGAAATTGCTGGTGGTGCAGCCCTAAACAATACCTATTTTAGCAATCACT ATTCATCTCAGAAAGATGACCCTGAAATTAAAGGTTTTGTCGAAAAATATCAAGCAAAATTTGGCCAAGTTCCCGATACT TTTGCAGCCCTTGGTTATGATACTGCCGTATTATTGGTAGATGCCATCAAGCGTTCCGAAGACGCATCTCCTGAGAAAAT AAAAGAAGCACTGGCCAATGCCAAGGATGTGCAAGCTATAACTGGAAAACTGTCATTTGATGAGAACCATAACCCCATAA AAGGTGCTGTTATCCTAGAAATGAAAGATGGCAAACAAGTCTATAAAACCTACGTACAACCTTAA
Upstream 100 bases:
>100_bases TTTTATCATTTTTATTTATAAATTATGGCGGGAGGTGTTTAAAAGACTGACAGGGGATTGGTTTTGTTTAATGTTTAGTT AACGAATGAGGAGGGGTAAA
Downstream 100 bases:
>100_bases GGAAACCAAGCCTAAATAAAAGATAGTGAGGGAGTCTCACTCCCTCACTATCTTTTTAAGCAACTCTAAAACAACTGATA GAGGTGGCCGCTTTGGAAGT
Product: extracellular ligand-binding receptor
Products: ADP; phosphate; L-leucine [Cytoplasm] [C]
Alternate protein names: LIVAT-BP; Leu/Ile/Val/Thr/Ala-binding protein [H]
Number of amino acids: Translated: 394; Mature: 394
Protein sequence:
>394_residues MKKHFRLAALLVALVMLAGLVSGCGGGGEEKKAADANEIVIGGNLELSGPVATFGTAMKNGAEMYFEEVNAAGGVLGKKI KFNVMDNKSDATEAANVATRLITQDKVVAVMGAATSGNTMGFMQVATDNKVPIITPSGTALEVTVDPNTKKVRDYVFRTC FIDPFQGIVMANFATNDLKAKTAVLYVDNQSPYAKGLAQFFKDSFIKQGGKIVGEEAFMPEDQDFKATLTKIKGLNPDVI YVPAYYEPVGKIVKQGREIGITVPFLGGDGWDSPKLPEIAGGAALNNTYFSNHYSSQKDDPEIKGFVEKYQAKFGQVPDT FAALGYDTAVLLVDAIKRSEDASPEKIKEALANAKDVQAITGKLSFDENHNPIKGAVILEMKDGKQVYKTYVQP
Sequences:
>Translated_394_residues MKKHFRLAALLVALVMLAGLVSGCGGGGEEKKAADANEIVIGGNLELSGPVATFGTAMKNGAEMYFEEVNAAGGVLGKKI KFNVMDNKSDATEAANVATRLITQDKVVAVMGAATSGNTMGFMQVATDNKVPIITPSGTALEVTVDPNTKKVRDYVFRTC FIDPFQGIVMANFATNDLKAKTAVLYVDNQSPYAKGLAQFFKDSFIKQGGKIVGEEAFMPEDQDFKATLTKIKGLNPDVI YVPAYYEPVGKIVKQGREIGITVPFLGGDGWDSPKLPEIAGGAALNNTYFSNHYSSQKDDPEIKGFVEKYQAKFGQVPDT FAALGYDTAVLLVDAIKRSEDASPEKIKEALANAKDVQAITGKLSFDENHNPIKGAVILEMKDGKQVYKTYVQP >Mature_394_residues MKKHFRLAALLVALVMLAGLVSGCGGGGEEKKAADANEIVIGGNLELSGPVATFGTAMKNGAEMYFEEVNAAGGVLGKKI KFNVMDNKSDATEAANVATRLITQDKVVAVMGAATSGNTMGFMQVATDNKVPIITPSGTALEVTVDPNTKKVRDYVFRTC FIDPFQGIVMANFATNDLKAKTAVLYVDNQSPYAKGLAQFFKDSFIKQGGKIVGEEAFMPEDQDFKATLTKIKGLNPDVI YVPAYYEPVGKIVKQGREIGITVPFLGGDGWDSPKLPEIAGGAALNNTYFSNHYSSQKDDPEIKGFVEKYQAKFGQVPDT FAALGYDTAVLLVDAIKRSEDASPEKIKEALANAKDVQAITGKLSFDENHNPIKGAVILEMKDGKQVYKTYVQP
Specific function: Component of the high-affinity leucine, isoleucine, valine transport system I (LIV-I), which is operative without Na(+) and is specific for alanine and threonine, in addition to branched-chain amino acids [H]
COG id: COG0683
COG function: function code E; ABC-type branched-chain amino acid transport systems, periplasmic component
Gene ontology:
Cell location: Periplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the leucine-binding protein family [H]
Homologues:
Organism=Escherichia coli, GI1789867, Length=327, Percent_Identity=26.605504587156, Blast_Score=113, Evalue=2e-26, Organism=Escherichia coli, GI48994941, Length=327, Percent_Identity=29.0519877675841, Blast_Score=111, Evalue=7e-26,
Paralogues:
None
Copy number: 240 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001828 - InterPro: IPR000709 [H]
Pfam domain/function: PF01094 ANF_receptor [H]
EC number: NA
Molecular weight: Translated: 42308; Mature: 42308
Theoretical pI: Translated: 5.89; Mature: 5.89
Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS00583 PFKB_KINASES_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKHFRLAALLVALVMLAGLVSGCGGGGEEKKAADANEIVIGGNLELSGPVATFGTAMKN CCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEECCCEEECCCHHHHHHHHHC GAEMYFEEVNAAGGVLGKKIKFNVMDNKSDATEAANVATRLITQDKVVAVMGAATSGNTM CHHHHHHHHHHCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCCE GFMQVATDNKVPIITPSGTALEVTVDPNTKKVRDYVFRTCFIDPFQGIVMANFATNDLKA EEEEEECCCCCEEECCCCCEEEEEECCCHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCC KTAVLYVDNQSPYAKGLAQFFKDSFIKQGGKIVGEEAFMPEDQDFKATLTKIKGLNPDVI EEEEEEEECCCHHHHHHHHHHHHHHHHCCCCEECCCCCCCCCCCHHHHHHHHCCCCCCEE YVPAYYEPVGKIVKQGREIGITVPFLGGDGWDSPKLPEIAGGAALNNTYFSNHYSSQKDD EECCHHHHHHHHHHCCCEEEEEEEEECCCCCCCCCCCCCCCCCEECCCEECCCCCCCCCC PEIKGFVEKYQAKFGQVPDTFAALGYDTAVLLVDAIKRSEDASPEKIKEALANAKDVQAI HHHHHHHHHHHHHHCCCCHHHHHHCCCHHHHHHHHHHCCCCCCHHHHHHHHCCCHHHHHH TGKLSFDENHNPIKGAVILEMKDGKQVYKTYVQP HEEEECCCCCCCCCEEEEEEECCCHHHHHHHCCC >Mature Secondary Structure MKKHFRLAALLVALVMLAGLVSGCGGGGEEKKAADANEIVIGGNLELSGPVATFGTAMKN CCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEECCCEEECCCHHHHHHHHHC GAEMYFEEVNAAGGVLGKKIKFNVMDNKSDATEAANVATRLITQDKVVAVMGAATSGNTM CHHHHHHHHHHCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCCE GFMQVATDNKVPIITPSGTALEVTVDPNTKKVRDYVFRTCFIDPFQGIVMANFATNDLKA EEEEEECCCCCEEECCCCCEEEEEECCCHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCC KTAVLYVDNQSPYAKGLAQFFKDSFIKQGGKIVGEEAFMPEDQDFKATLTKIKGLNPDVI EEEEEEEECCCHHHHHHHHHHHHHHHHCCCCEECCCCCCCCCCCHHHHHHHHCCCCCCEE YVPAYYEPVGKIVKQGREIGITVPFLGGDGWDSPKLPEIAGGAALNNTYFSNHYSSQKDD EECCHHHHHHHHHHCCCEEEEEEEEECCCCCCCCCCCCCCCCCEECCCEECCCCCCCCCC PEIKGFVEKYQAKFGQVPDTFAALGYDTAVLLVDAIKRSEDASPEKIKEALANAKDVQAI HHHHHHHHHHHHHHCCCCHHHHHHCCCHHHHHHHHHHCCCCCCHHHHHHHHCCCHHHHHH TGKLSFDENHNPIKGAVILEMKDGKQVYKTYVQP HEEEECCCCCCCCCEEEEEEECCCHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; L-leucine [Periplasm]; H2O [C]
Specific reaction: ATP + L-leucine [Periplasm] + H2O = ADP + phosphate + L-leucine [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 2509433; 2120183; 10984043 [H]