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The map label for this gene is rbr [H]

Identifier: 134300056

GI number: 134300056

Start: 2422143

End: 2422676

Strand: Reverse

Name: rbr [H]

Synonym: Dred_2212

Alternate gene names: 134300056

Gene position: 2422676-2422143 (Counterclockwise)

Preceding gene: 134300057

Following gene: 134300054

Centisome position: 67.15

GC content: 39.89

Gene sequence:

>534_bases
ATGAGTTTAAAAGGAACCAAAACCGAAGCCAACTTAAAAGCAGCCTTTGCAGGTGAAAGCCAGGCTCGTAATAAATATAC
TTATTGGGCCAGTGCAGCAAAAAAAGAAGGCTATGAGCAAATTGCTGGTATCTTTATTGAGACTGCTGATAATGAAAAGG
AACACGCTAAAAGATTACTTAAGTTTTTAAATGGAATCACTAACACCAAAGCTCACCTGAAAGAAGCCGCCACTGGTGAA
AACTATGAATACACCAATATGTATGTAGAATTTGAAAAAGTTGCCCGGGAAGAGGGCTTTGACGAGATTGCTGATGTTTT
TAAAGAAATAGGTGAAGTGGAAGAAGAACACGAAAAGCGTTTCTTGGCTTTACTGAAAAACATTGAAGAAGGCAAAGTAT
TTAAGAGAGATGAAGAGGTAAAGTGGAAATGTCGTAATTGTGGTTACGTTCACAGCGGTAAGGAGGCTCCTGAAATATGC
CCGGCCTGTGCGCATCCTCAGGCTTACTACGAAGTCCTTTGCGAAAACTATTAA

Upstream 100 bases:

>100_bases
AACAAATTATGAACTATTAATAAGCCAAAAGGAAATAAATATTGTTTTGCAGAAGAAAAACATGGTAACAAAAAAGATCA
AATTAAAGGAGGGCTCATCA

Downstream 100 bases:

>100_bases
TAAACAAGAAACCCTGTGCCAATGCATAGGGTTTCTTGATTTTATATCAGCTTTGTACAATCCCAATAATTAGAACCACG
ATAGCCACAATGGTAAACAC

Product: rubrerythrin

Products: NA

Alternate protein names: RR [H]

Number of amino acids: Translated: 177; Mature: 176

Protein sequence:

>177_residues
MSLKGTKTEANLKAAFAGESQARNKYTYWASAAKKEGYEQIAGIFIETADNEKEHAKRLLKFLNGITNTKAHLKEAATGE
NYEYTNMYVEFEKVAREEGFDEIADVFKEIGEVEEEHEKRFLALLKNIEEGKVFKRDEEVKWKCRNCGYVHSGKEAPEIC
PACAHPQAYYEVLCENY

Sequences:

>Translated_177_residues
MSLKGTKTEANLKAAFAGESQARNKYTYWASAAKKEGYEQIAGIFIETADNEKEHAKRLLKFLNGITNTKAHLKEAATGE
NYEYTNMYVEFEKVAREEGFDEIADVFKEIGEVEEEHEKRFLALLKNIEEGKVFKRDEEVKWKCRNCGYVHSGKEAPEIC
PACAHPQAYYEVLCENY
>Mature_176_residues
SLKGTKTEANLKAAFAGESQARNKYTYWASAAKKEGYEQIAGIFIETADNEKEHAKRLLKFLNGITNTKAHLKEAATGEN
YEYTNMYVEFEKVAREEGFDEIADVFKEIGEVEEEHEKRFLALLKNIEEGKVFKRDEEVKWKCRNCGYVHSGKEAPEICP
ACAHPQAYYEVLCENY

Specific function: May provide oxidative stress protection via catalytic reduction of intracellular hydrogen peroxide [H]

COG id: COG1592

COG function: function code C; Rubrerythrin

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 rubredoxin-like domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009040
- InterPro:   IPR012347
- InterPro:   IPR009078
- InterPro:   IPR004039
- InterPro:   IPR003251 [H]

Pfam domain/function: PF02915 Rubrerythrin [H]

EC number: NA

Molecular weight: Translated: 20293; Mature: 20162

Theoretical pI: Translated: 5.22; Mature: 5.22

Prosite motif: PS50903 RUBREDOXIN_LIKE ; PS50905 FERRITIN_LIKE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.8 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
2.8 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLKGTKTEANLKAAFAGESQARNKYTYWASAAKKEGYEQIAGIFIETADNEKEHAKRLL
CCCCCCCCCCCHHHHCCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH
KFLNGITNTKAHLKEAATGENYEYTNMYVEFEKVAREEGFDEIADVFKEIGEVEEEHEKR
HHHHCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH
FLALLKNIEEGKVFKRDEEVKWKCRNCGYVHSGKEAPEICPACAHPQAYYEVLCENY
HHHHHHCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCHHCCCCCCHHHHHHHHHCCC
>Mature Secondary Structure 
SLKGTKTEANLKAAFAGESQARNKYTYWASAAKKEGYEQIAGIFIETADNEKEHAKRLL
CCCCCCCCCCHHHHCCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH
KFLNGITNTKAHLKEAATGENYEYTNMYVEFEKVAREEGFDEIADVFKEIGEVEEEHEKR
HHHHCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH
FLALLKNIEEGKVFKRDEEVKWKCRNCGYVHSGKEAPEICPACAHPQAYYEVLCENY
HHHHHHCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCHHCCCCCCHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11972784; 12949112 [H]