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The map label for this gene is yigC [C]

Identifier: 134300041

GI number: 134300041

Start: 2402225

End: 2403670

Strand: Reverse

Name: yigC [C]

Synonym: Dred_2197

Alternate gene names: 134300041

Gene position: 2403670-2402225 (Counterclockwise)

Preceding gene: 134300042

Following gene: 134300040

Centisome position: 66.62

GC content: 45.09

Gene sequence:

>1446_bases
GTGGCATATCAAGATCTAAGGGATTACATGAAGACCCTGGAAAATAAGGGGTTATTGAAACGGATTACGACTGAGGTAAG
TGCTGATCTAGAGATTACAGAAATAACGGACCGGGTTTGTAAAAGCAGTGGCCCTGCACTGTTGTTTGAAAATGTTAAAG
GTTATAAAATGCCTGTGATTACCAACATGATGGGTTCAATGGAAATGATAAAGTTGGCCCTGCAGGTAGATGACCTAGAT
GATATCGGTAAAGAAATCATGACCTTTTTAAATCCCCCGGAGCTTCCCTCAAGTTTTCTGGATAAGTTAAAAACACTGCC
AAAGTTGGCGCAAATTTCTTCCTTTTTGCCCAAGAATGTCCGTAGCGGTCCTTGTAAAGAGGTTATTATCAAGGACAAAC
CGTCTTTAGCCGTACTACCGGTCTTAAAATGCTGGCCTATGGATGGAGGCCCCTTTATTACTCTGCCGCTGGTTTTTACC
AAGGACCCGGAAACAGGCAGGAGAAATGTCGGTATGTACCGCATGCAGGTCTTTGATGAAACCACCACAGGTATGCACTG
GCACAAGCATAAAGATGGGGCTGAAAACCATCGAAAACAGAAACAGAAGAAACAACGACTGGAAGTGGCAGTGGCCTTGG
GGGCTGACCCAGCCTGCATTTTTTCGTCCATTGCTCCATTGCCCCCGGCCATTGATGAAATGTTGTTGGCAGGATTTCTA
CGTAAAGAACCGGTGGAAATGGTAAAGTGCGAGACTGTGGATATTGAGGTTCCTGCCCGGGCAGAAATTATTTTGGAGGG
CTATGTGGACCCCGATGAAACCCGCTGGGAAGGCCCCTTTGGGGATCATACTGGATACTACTCCTTAGCAGATGATTACC
CAGTATTTCATCTAACCTGTATTACGCACCGGAAAGACCCTATTTACCCAGCCACCATCGTGGGGCAACCTCCCATTGAA
GATAATTTTATTGGTAAAGCAATTGAACGTACCTTTTTACCTTTAATGCGCTTGCAACTGCCAGAGATCGTAGATATAAA
CATGCCTCCAGAAGGGGTCTTTCACAACTGTGTAATTGTGTCAATTAAAAAGCGTTATCCTGGTCATGCTAAAAAAGTTA
TGAATGCCCTCTGGGGAATGGGTCAAATGATGTTTGCTAAATTAATAATTGTGGTGGATGAACATGTTGATGTGCAAAAC
CCCTCCCAGGTGGCTTGGCGTGTCTTTAATAATATTGACGCCAGAAGAGATGTTATGATTGTGGATGGCCCATTAGATGC
GCTGGACCATTCTTCTCCTGCACCCTATTATGGCGCGAAGATGGGGATTGATGCTACGAAAAAATGGCCTGCGGAAGGGC
ACAATCGGGAATGGCCCGATGACATTGTCATGAGTGAGGAAATCATATCTCTGGTAGACAGGAAGTGGAAGAGCTATGGC
TTCTAA

Upstream 100 bases:

>100_bases
TGCTGTCCATGTAGGTATAAAGTAAGTGCAAAAAAATTGTTTAGCAGAAATAATCCGAAGCATTAATAATTTAAATCTAA
TTAGGGATGGTGTGTTGTAA

Downstream 100 bases:

>100_bases
GATAAAGGTTTTTTTTCAAATGATTAAATTTGAGCATACCCTTTTTGCCCTGCCCTTTGCCTATATTGGAGCCTTACTTA
CAGAACTGAAGATTCCTTCC

Product: UbiD family decarboxylase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 481; Mature: 480

Protein sequence:

>481_residues
MAYQDLRDYMKTLENKGLLKRITTEVSADLEITEITDRVCKSSGPALLFENVKGYKMPVITNMMGSMEMIKLALQVDDLD
DIGKEIMTFLNPPELPSSFLDKLKTLPKLAQISSFLPKNVRSGPCKEVIIKDKPSLAVLPVLKCWPMDGGPFITLPLVFT
KDPETGRRNVGMYRMQVFDETTTGMHWHKHKDGAENHRKQKQKKQRLEVAVALGADPACIFSSIAPLPPAIDEMLLAGFL
RKEPVEMVKCETVDIEVPARAEIILEGYVDPDETRWEGPFGDHTGYYSLADDYPVFHLTCITHRKDPIYPATIVGQPPIE
DNFIGKAIERTFLPLMRLQLPEIVDINMPPEGVFHNCVIVSIKKRYPGHAKKVMNALWGMGQMMFAKLIIVVDEHVDVQN
PSQVAWRVFNNIDARRDVMIVDGPLDALDHSSPAPYYGAKMGIDATKKWPAEGHNREWPDDIVMSEEIISLVDRKWKSYG
F

Sequences:

>Translated_481_residues
MAYQDLRDYMKTLENKGLLKRITTEVSADLEITEITDRVCKSSGPALLFENVKGYKMPVITNMMGSMEMIKLALQVDDLD
DIGKEIMTFLNPPELPSSFLDKLKTLPKLAQISSFLPKNVRSGPCKEVIIKDKPSLAVLPVLKCWPMDGGPFITLPLVFT
KDPETGRRNVGMYRMQVFDETTTGMHWHKHKDGAENHRKQKQKKQRLEVAVALGADPACIFSSIAPLPPAIDEMLLAGFL
RKEPVEMVKCETVDIEVPARAEIILEGYVDPDETRWEGPFGDHTGYYSLADDYPVFHLTCITHRKDPIYPATIVGQPPIE
DNFIGKAIERTFLPLMRLQLPEIVDINMPPEGVFHNCVIVSIKKRYPGHAKKVMNALWGMGQMMFAKLIIVVDEHVDVQN
PSQVAWRVFNNIDARRDVMIVDGPLDALDHSSPAPYYGAKMGIDATKKWPAEGHNREWPDDIVMSEEIISLVDRKWKSYG
F
>Mature_480_residues
AYQDLRDYMKTLENKGLLKRITTEVSADLEITEITDRVCKSSGPALLFENVKGYKMPVITNMMGSMEMIKLALQVDDLDD
IGKEIMTFLNPPELPSSFLDKLKTLPKLAQISSFLPKNVRSGPCKEVIIKDKPSLAVLPVLKCWPMDGGPFITLPLVFTK
DPETGRRNVGMYRMQVFDETTTGMHWHKHKDGAENHRKQKQKKQRLEVAVALGADPACIFSSIAPLPPAIDEMLLAGFLR
KEPVEMVKCETVDIEVPARAEIILEGYVDPDETRWEGPFGDHTGYYSLADDYPVFHLTCITHRKDPIYPATIVGQPPIED
NFIGKAIERTFLPLMRLQLPEIVDINMPPEGVFHNCVIVSIKKRYPGHAKKVMNALWGMGQMMFAKLIIVVDEHVDVQNP
SQVAWRVFNNIDARRDVMIVDGPLDALDHSSPAPYYGAKMGIDATKKWPAEGHNREWPDDIVMSEEIISLVDRKWKSYGF

Specific function: Unknown

COG id: COG0043

COG function: function code H; 3-polyprenyl-4-hydroxybenzoate decarboxylase and related decarboxylases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ubiD family [H]

Homologues:

Organism=Escherichia coli, GI1790277, Length=484, Percent_Identity=42.5619834710744, Blast_Score=410, Evalue=1e-115,
Organism=Saccharomyces cerevisiae, GI6320748, Length=433, Percent_Identity=25.4041570438799, Blast_Score=100, Evalue=5e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002830
- InterPro:   IPR022390
- InterPro:   IPR009002 [H]

Pfam domain/function: PF01977 UbiD [H]

EC number: 4.1.1.-

Molecular weight: Translated: 54362; Mature: 54231

Theoretical pI: Translated: 6.11; Mature: 6.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
4.8 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
4.6 %Met     (Mature Protein)
6.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAYQDLRDYMKTLENKGLLKRITTEVSADLEITEITDRVCKSSGPALLFENVKGYKMPVI
CCHHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHCCCCEEEEECCCCCCCHHH
TNMMGSMEMIKLALQVDDLDDIGKEIMTFLNPPELPSSFLDKLKTLPKLAQISSFLPKNV
HHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCC
RSGPCKEVIIKDKPSLAVLPVLKCWPMDGGPFITLPLVFTKDPETGRRNVGMYRMQVFDE
CCCCCCEEEEECCCCEEEEEHHHEECCCCCCEEEEEEEEECCCCCCCCCCCEEEEEEECC
TTTGMHWHKHKDGAENHRKQKQKKQRLEVAVALGADPACIFSSIAPLPPAIDEMLLAGFL
CCCCCCCCCCCCCHHHHHHHHHHHHHHHEEEEECCCHHHHHHHCCCCCHHHHHHHHHHHH
RKEPVEMVKCETVDIEVPARAEIILEGYVDPDETRWEGPFGDHTGYYSLADDYPVFHLTC
HCCCHHHEEEEEEEEECCCCEEEEEECCCCCCCCCCCCCCCCCCCEEECCCCCCEEEEEE
ITHRKDPIYPATIVGQPPIEDNFIGKAIERTFLPLMRLQLPEIVDINMPPEGVFHNCVIV
EECCCCCCCCEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCEEEE
SIKKRYPGHAKKVMNALWGMGQMMFAKLIIVVDEHVDVQNPSQVAWRVFNNIDARRDVMI
EEECCCCCHHHHHHHHHHCCHHHHHHHHHHEEECCCCCCCHHHHHHHHHHCCCCCCCEEE
VDGPLDALDHSSPAPYYGAKMGIDATKKWPAEGHNREWPDDIVMSEEIISLVDRKWKSYG
ECCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCC
F
C
>Mature Secondary Structure 
AYQDLRDYMKTLENKGLLKRITTEVSADLEITEITDRVCKSSGPALLFENVKGYKMPVI
CHHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHCCCCEEEEECCCCCCCHHH
TNMMGSMEMIKLALQVDDLDDIGKEIMTFLNPPELPSSFLDKLKTLPKLAQISSFLPKNV
HHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCC
RSGPCKEVIIKDKPSLAVLPVLKCWPMDGGPFITLPLVFTKDPETGRRNVGMYRMQVFDE
CCCCCCEEEEECCCCEEEEEHHHEECCCCCCEEEEEEEEECCCCCCCCCCCEEEEEEECC
TTTGMHWHKHKDGAENHRKQKQKKQRLEVAVALGADPACIFSSIAPLPPAIDEMLLAGFL
CCCCCCCCCCCCCHHHHHHHHHHHHHHHEEEEECCCHHHHHHHCCCCCHHHHHHHHHHHH
RKEPVEMVKCETVDIEVPARAEIILEGYVDPDETRWEGPFGDHTGYYSLADDYPVFHLTC
HCCCHHHEEEEEEEEECCCCEEEEEECCCCCCCCCCCCCCCCCCCEEECCCCCCEEEEEE
ITHRKDPIYPATIVGQPPIEDNFIGKAIERTFLPLMRLQLPEIVDINMPPEGVFHNCVIV
EECCCCCCCCEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCEEEE
SIKKRYPGHAKKVMNALWGMGQMMFAKLIIVVDEHVDVQNPSQVAWRVFNNIDARRDVMI
EEECCCCCHHHHHHHHHHCCHHHHHHHHHHEEECCCCCCCHHHHHHHHHHCCCCCCCEEE
VDGPLDALDHSSPAPYYGAKMGIDATKKWPAEGHNREWPDDIVMSEEIISLVDRKWKSYG
ECCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCC
F
C

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9389475 [H]