| Definition | Desulfotomaculum reducens MI-1 chromosome, complete genome. |
|---|---|
| Accession | NC_009253 |
| Length | 3,608,104 |
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The map label for this gene is yufQ [H]
Identifier: 134300020
GI number: 134300020
Start: 2377528
End: 2378460
Strand: Reverse
Name: yufQ [H]
Synonym: Dred_2174
Alternate gene names: 134300020
Gene position: 2378460-2377528 (Counterclockwise)
Preceding gene: 134300021
Following gene: 134300019
Centisome position: 65.92
GC content: 46.95
Gene sequence:
>933_bases ATGTCACAGGAATTATTAATAACTATTTTGGCCACCGCCATTACGGCTGGCACCCCAATCCTATATGCGGCACTGGGCGA AGTAATGACCGAGAGATCTGGTATTCTCAATCTGGGGGTTGAAGGTATGATGCTGGTGGGAGCTGTCAGTGGTTTTGCCT TTGCCATTAAAACCAATGATCCGTGGCTGGGTGTTTTAGCTGCTATGCTAGGTGGCGGGGCAATGGCTCTGATCCATGCT TTCCTAACAGTAACCTTGCAGGCCAACCAGGTTGTAAGTGGACTGGCTCTTACAATATTTGGCACAGGGTTATCTGGCTT TATTGGGAAATCCTATATAGGAATTCCTGTGGTGAATTCCTTTAAGCCAGTAACCCTTGGCTTTTTAAGCGATATCCCAT TTTTAGGACCGATCTTTTTTCATCACGATTATCTAGTGTATGTAACCTATCTGTTGGTGCCAACCCTCTGGTTTCTTATT TACCGGACACGACCGGGTTTGAACCTAAGGGCAGTGGGTGAAAACCCAGCTTCTGCGGACTCCCTAGGGGTTAGTGTCTA TCGAATTCGTTACATCTATGTAATTATGGGCGGTATGCTGGCTGGAATCGGTGGGGCGTACCTTTCACTGGCCTATGCAC CCACCTGGTTAGAAAATATGACAGCGGGCAGAGGGTGGATTGCGGTGGCCCTGGTAATATTTGCCACGTGGAATCCCCTT AGGGCGATGTTTGGTAGTTATATTTTTGGTGGGATTGATGCCCTTGGCTTTCGTGCACAGGCCATGGGTGTGATGATTCC TTCGTTCTTCTTGAAAATGTTACCTTATTTCTTTACTATTTTTGTTTTAATTATGGTAACTCGAAAGGCTATGGCTAACC GGGTTGGTTCTCCAGGCGCATTAGGCTTGCCCTATGACCGTGAAGAACGCTGA
Upstream 100 bases:
>100_bases TATGATACAAGGTGCTTTGTTGTTTTTTATTTTAGGTGGAGAAATATTTAATCGCTATAAAATTGTCTATAGAGGCAAAA CCAAGATGGAGGTGTAGCCA
Downstream 100 bases:
>100_bases TAATGACATTAGGGGGAGTTAATATGCAATTGAAAGAAATCATAGAAAACAATGCCGAAGTTGTTTCGGATCAAATATTA AGGGTAGATTCCTTTATCAA
Product: inner-membrane translocator
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 310; Mature: 309
Protein sequence:
>310_residues MSQELLITILATAITAGTPILYAALGEVMTERSGILNLGVEGMMLVGAVSGFAFAIKTNDPWLGVLAAMLGGGAMALIHA FLTVTLQANQVVSGLALTIFGTGLSGFIGKSYIGIPVVNSFKPVTLGFLSDIPFLGPIFFHHDYLVYVTYLLVPTLWFLI YRTRPGLNLRAVGENPASADSLGVSVYRIRYIYVIMGGMLAGIGGAYLSLAYAPTWLENMTAGRGWIAVALVIFATWNPL RAMFGSYIFGGIDALGFRAQAMGVMIPSFFLKMLPYFFTIFVLIMVTRKAMANRVGSPGALGLPYDREER
Sequences:
>Translated_310_residues MSQELLITILATAITAGTPILYAALGEVMTERSGILNLGVEGMMLVGAVSGFAFAIKTNDPWLGVLAAMLGGGAMALIHA FLTVTLQANQVVSGLALTIFGTGLSGFIGKSYIGIPVVNSFKPVTLGFLSDIPFLGPIFFHHDYLVYVTYLLVPTLWFLI YRTRPGLNLRAVGENPASADSLGVSVYRIRYIYVIMGGMLAGIGGAYLSLAYAPTWLENMTAGRGWIAVALVIFATWNPL RAMFGSYIFGGIDALGFRAQAMGVMIPSFFLKMLPYFFTIFVLIMVTRKAMANRVGSPGALGLPYDREER >Mature_309_residues SQELLITILATAITAGTPILYAALGEVMTERSGILNLGVEGMMLVGAVSGFAFAIKTNDPWLGVLAAMLGGGAMALIHAF LTVTLQANQVVSGLALTIFGTGLSGFIGKSYIGIPVVNSFKPVTLGFLSDIPFLGPIFFHHDYLVYVTYLLVPTLWFLIY RTRPGLNLRAVGENPASADSLGVSVYRIRYIYVIMGGMLAGIGGAYLSLAYAPTWLENMTAGRGWIAVALVIFATWNPLR AMFGSYIFGGIDALGFRAQAMGVMIPSFFLKMLPYFFTIFVLIMVTRKAMANRVGSPGALGLPYDREER
Specific function: Part of the binding-protein-dependent transport system. Probably responsible for the translocation of the substrates across the membrane [H]
COG id: COG1079
COG function: function code R; Uncharacterized ABC-type transport system, permease component
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the binding-protein-dependent transport system permease family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001851 [H]
Pfam domain/function: PF02653 BPD_transp_2 [H]
EC number: NA
Molecular weight: Translated: 33366; Mature: 33235
Theoretical pI: Translated: 9.51; Mature: 9.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.8 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.5 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQELLITILATAITAGTPILYAALGEVMTERSGILNLGVEGMMLVGAVSGFAFAIKTND CCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCEECCCCHHHHHEECCCEEEEEECCC PWLGVLAAMLGGGAMALIHAFLTVTLQANQVVSGLALTIFGTGLSGFIGKSYIGIPVVNS CHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHEEEEEECCHHHHHCCCCCCCCEECC FKPVTLGFLSDIPFLGPIFFHHDYLVYVTYLLVPTLWFLIYRTRPGLNLRAVGENPASAD CCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCH SLGVSVYRIRYIYVIMGGMLAGIGGAYLSLAYAPTWLENMTAGRGWIAVALVIFATWNPL HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCHHHHHHCCCCCHHHHHHHHHHHCCCHH RAMFGSYIFGGIDALGFRAQAMGVMIPSFFLKMLPYFFTIFVLIMVTRKAMANRVGSPGA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC LGLPYDREER CCCCCCCCCC >Mature Secondary Structure SQELLITILATAITAGTPILYAALGEVMTERSGILNLGVEGMMLVGAVSGFAFAIKTND CCHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCEECCCCHHHHHEECCCEEEEEECCC PWLGVLAAMLGGGAMALIHAFLTVTLQANQVVSGLALTIFGTGLSGFIGKSYIGIPVVNS CHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHEEEEEECCHHHHHCCCCCCCCEECC FKPVTLGFLSDIPFLGPIFFHHDYLVYVTYLLVPTLWFLIYRTRPGLNLRAVGENPASAD CCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCH SLGVSVYRIRYIYVIMGGMLAGIGGAYLSLAYAPTWLENMTAGRGWIAVALVIFATWNPL HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCHHHHHHCCCCCHHHHHHHHHHHCCCHH RAMFGSYIFGGIDALGFRAQAMGVMIPSFFLKMLPYFFTIFVLIMVTRKAMANRVGSPGA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC LGLPYDREER CCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9274030; 9384377 [H]