Click here to switch to the map view.

The map label for this gene is yufP [H]

Identifier: 134300021

GI number: 134300021

Start: 2378464

End: 2379558

Strand: Reverse

Name: yufP [H]

Synonym: Dred_2175

Alternate gene names: 134300021

Gene position: 2379558-2378464 (Counterclockwise)

Preceding gene: 134300022

Following gene: 134300020

Centisome position: 65.95

GC content: 45.48

Gene sequence:

>1095_bases
ATGATTAAACTGGAGAGACGGTCAGCACCTTCTCTGGCTGGCATGATCTTAATTCCACTTACCGCTATTTTTCTAGCACT
GATCACCGGAGCCATCTTCCTTTATATCAACGGATTAACCTCCCCCAAGGGTATTACTTGGGGGCAGGTTTTTGCAGTTT
ATTTCGGTATGTTGGAAGGAGCAGTTGGATCTTCCTACGGCTTGTCCGAAACCATTGTAAAAGCCATTCCTTTGATGCTT
TGTGGTTTAGGAGTATCCATTGCCTTTCGTATGCAGCTTTGGAACATTGGTGCCGAGGGTCAGTTTCATATGGGGGCCTT
TGGAGCTGCCTGGGTTGCCTTAAACTTTTCTCATTTACCAGCTTATGTTATGCTGCCGTTAATGGTTTTAGCTGGGATAA
TATGTGGCGGGATCTGGGGCTTACTGCCTGGTATTCCCAGGGCATATCTGGGTGTGAATGAAACCATCACTACTCTGATG
TTGAACTATGTAGCTATACTTTGGGTGAATTATCTAGTTTTTGGCCCATGGAAAGATCCCCAGGGCATGAACTTTCCATT
AAGTAAACCCTTTGAACCCTCAGCCATTCTGCCAACACTGGGTAACAGCAGAGTTCATTTTGGGCTGGTTTTTGCACTGG
TTATAGCAGTGTTTCTCTGGTTTGCCCTGAGGCAATCTCGCTGGGGCTATGAGGTAACAGTGATTGGGGAGAGTTCCAGA
GCGGCAAGCTATGCAGGCATGAATATAACCAAGAATATTCTCATGGTGATGTTTCTCAGCGGGGCCATGGCAGGACTTGC
TGGTATGGCCGAGGTTTCAGCCATTGCTCAAAGGATGCAGCAGGGCATTAGTCCTGGTTATGGCTACACTGCCATTATTG
TGGCTTGGCTAGGAAAATTAAATCCCTTTGCAATCCTGTTTGTTTCCTTCTTACTGGGTGCTTTACAGGTTGGTGGTTAT
AGCGTGCAATCCAGTGGGGTGCCTGCGGCCATTGTATTTATGATACAAGGTGCTTTGTTGTTTTTTATTTTAGGTGGAGA
AATATTTAATCGCTATAAAATTGTCTATAGAGGCAAAACCAAGATGGAGGTGTAG

Upstream 100 bases:

>100_bases
ATAAGGGTTCTTTAGTGGGTATTCTTCCGGTGGAGAAAGCAGAACCAGAGGTCATTGGTCTAATGATGTTAGGGGCAAAA
TCAGGGGAGGTTATGGCATC

Downstream 100 bases:

>100_bases
CCAATGTCACAGGAATTATTAATAACTATTTTGGCCACCGCCATTACGGCTGGCACCCCAATCCTATATGCGGCACTGGG
CGAAGTAATGACCGAGAGAT

Product: inner-membrane translocator

Products: ADP; phosphate; beta-D-galactose [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 364; Mature: 364

Protein sequence:

>364_residues
MIKLERRSAPSLAGMILIPLTAIFLALITGAIFLYINGLTSPKGITWGQVFAVYFGMLEGAVGSSYGLSETIVKAIPLML
CGLGVSIAFRMQLWNIGAEGQFHMGAFGAAWVALNFSHLPAYVMLPLMVLAGIICGGIWGLLPGIPRAYLGVNETITTLM
LNYVAILWVNYLVFGPWKDPQGMNFPLSKPFEPSAILPTLGNSRVHFGLVFALVIAVFLWFALRQSRWGYEVTVIGESSR
AASYAGMNITKNILMVMFLSGAMAGLAGMAEVSAIAQRMQQGISPGYGYTAIIVAWLGKLNPFAILFVSFLLGALQVGGY
SVQSSGVPAAIVFMIQGALLFFILGGEIFNRYKIVYRGKTKMEV

Sequences:

>Translated_364_residues
MIKLERRSAPSLAGMILIPLTAIFLALITGAIFLYINGLTSPKGITWGQVFAVYFGMLEGAVGSSYGLSETIVKAIPLML
CGLGVSIAFRMQLWNIGAEGQFHMGAFGAAWVALNFSHLPAYVMLPLMVLAGIICGGIWGLLPGIPRAYLGVNETITTLM
LNYVAILWVNYLVFGPWKDPQGMNFPLSKPFEPSAILPTLGNSRVHFGLVFALVIAVFLWFALRQSRWGYEVTVIGESSR
AASYAGMNITKNILMVMFLSGAMAGLAGMAEVSAIAQRMQQGISPGYGYTAIIVAWLGKLNPFAILFVSFLLGALQVGGY
SVQSSGVPAAIVFMIQGALLFFILGGEIFNRYKIVYRGKTKMEV
>Mature_364_residues
MIKLERRSAPSLAGMILIPLTAIFLALITGAIFLYINGLTSPKGITWGQVFAVYFGMLEGAVGSSYGLSETIVKAIPLML
CGLGVSIAFRMQLWNIGAEGQFHMGAFGAAWVALNFSHLPAYVMLPLMVLAGIICGGIWGLLPGIPRAYLGVNETITTLM
LNYVAILWVNYLVFGPWKDPQGMNFPLSKPFEPSAILPTLGNSRVHFGLVFALVIAVFLWFALRQSRWGYEVTVIGESSR
AASYAGMNITKNILMVMFLSGAMAGLAGMAEVSAIAQRMQQGISPGYGYTAIIVAWLGKLNPFAILFVSFLLGALQVGGY
SVQSSGVPAAIVFMIQGALLFFILGGEIFNRYKIVYRGKTKMEV

Specific function: Probably part of a binding-protein-dependent transport system. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG4603

COG function: function code R; ABC-type uncharacterized transport system, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the binding-protein-dependent transport system permease family. AraH/rbsC subfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001851
- InterPro:   IPR002229 [H]

Pfam domain/function: PF02653 BPD_transp_2 [H]

EC number: NA

Molecular weight: Translated: 39295; Mature: 39295

Theoretical pI: Translated: 9.86; Mature: 9.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
4.9 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
4.9 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIKLERRSAPSLAGMILIPLTAIFLALITGAIFLYINGLTSPKGITWGQVFAVYFGMLEG
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCHHHHHHHHHHHHHHH
AVGSSYGLSETIVKAIPLMLCGLGVSIAFRMQLWNIGAEGQFHMGAFGAAWVALNFSHLP
CCCCCCCHHHHHHHHHHHHHHHCCHHHHEEEHHCCCCCCCCEECCHHHHHHHHEEHHHCH
AYVMLPLMVLAGIICGGIWGLLPGIPRAYLGVNETITTLMLNYVAILWVNYLVFGPWKDP
HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCC
QGMNFPLSKPFEPSAILPTLGNSRVHFGLVFALVIAVFLWFALRQSRWGYEVTVIGESSR
CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCC
AASYAGMNITKNILMVMFLSGAMAGLAGMAEVSAIAQRMQQGISPGYGYTAIIVAWLGKL
CHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCC
NPFAILFVSFLLGALQVGGYSVQSSGVPAAIVFMIQGALLFFILGGEIFNRYKIVYRGKT
CHHHHHHHHHHHHHHHHCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCEEEEEECCC
KMEV
CCCC
>Mature Secondary Structure
MIKLERRSAPSLAGMILIPLTAIFLALITGAIFLYINGLTSPKGITWGQVFAVYFGMLEG
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCHHHHHHHHHHHHHHH
AVGSSYGLSETIVKAIPLMLCGLGVSIAFRMQLWNIGAEGQFHMGAFGAAWVALNFSHLP
CCCCCCCHHHHHHHHHHHHHHHCCHHHHEEEHHCCCCCCCCEECCHHHHHHHHEEHHHCH
AYVMLPLMVLAGIICGGIWGLLPGIPRAYLGVNETITTLMLNYVAILWVNYLVFGPWKDP
HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCC
QGMNFPLSKPFEPSAILPTLGNSRVHFGLVFALVIAVFLWFALRQSRWGYEVTVIGESSR
CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCC
AASYAGMNITKNILMVMFLSGAMAGLAGMAEVSAIAQRMQQGISPGYGYTAIIVAWLGKL
CHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCC
NPFAILFVSFLLGALQVGGYSVQSSGVPAAIVFMIQGALLFFILGGEIFNRYKIVYRGKT
CHHHHHHHHHHHHHHHHCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCEEEEEECCC
KMEV
CCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; beta-D-galactose [Periplasm]; H2O [C]

Specific reaction: ATP + beta-D-galactose [Periplasm] + H2O = ADP + phosphate + beta-D-galactose [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9274030; 9384377 [H]