| Definition | Desulfotomaculum reducens MI-1 chromosome, complete genome. |
|---|---|
| Accession | NC_009253 |
| Length | 3,608,104 |
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The map label for this gene is 134299980
Identifier: 134299980
GI number: 134299980
Start: 2332913
End: 2333380
Strand: Reverse
Name: 134299980
Synonym: Dred_2134
Alternate gene names: NA
Gene position: 2333380-2332913 (Counterclockwise)
Preceding gene: 134299981
Following gene: 134299977
Centisome position: 64.67
GC content: 31.2
Gene sequence:
>468_bases ATGAAATCAAATATTAAGGAGATGTTTCCTGTTTGGGTAAATGATAATAAATACTATGATTTAATTATGAGTAATGATTT AGATAGTTTTTTTAGTTGTCAGTTGCTGGAAACTGTCAAGGGCTGGAAACCAAATTATTTCAATAGCGACTTTAAAAGCA TGGGTATAACCGAATATGCTAATAGTGGAAGTAATGTAATAGGCGTTGACCTTTCCCTATGTTCTGGGAAAACATTTGAC AATCATGTAGTAATGATGAACCAAGATGATGATTATAATTATGATTCATGCAACTTCAATATTATAGACAAAATAAGCAG GGAGAATTATTTCTCTAAGTATTGTGGCTCAACATTATTAACAATATGGAGTTTGTATAATATTCCACTTCCAAAATCAG AAGTGAATATTGCCATAGGAAAGAGCCAACTATGCCATATTTTTGAGCCACTTATGACATCAAATTGA
Upstream 100 bases:
>100_bases CACCTTGGAATGTAGAAAGAAGTGGAGGTGAATATTTGTTCTAACCTTGAATGGTTAAATTCTATACTCACATATCACAA TAGACAGCAACATATATAAA
Downstream 100 bases:
>100_bases ACCACCGATGACATTAATAGGGCCACCACCTTTAGTAGTGACCCCAGATGGTTATTTTTCTAAACCATGTCGTTCTCTCA TAGATATCTCCCCATCAATC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 155; Mature: 155
Protein sequence:
>155_residues MKSNIKEMFPVWVNDNKYYDLIMSNDLDSFFSCQLLETVKGWKPNYFNSDFKSMGITEYANSGSNVIGVDLSLCSGKTFD NHVVMMNQDDDYNYDSCNFNIIDKISRENYFSKYCGSTLLTIWSLYNIPLPKSEVNIAIGKSQLCHIFEPLMTSN
Sequences:
>Translated_155_residues MKSNIKEMFPVWVNDNKYYDLIMSNDLDSFFSCQLLETVKGWKPNYFNSDFKSMGITEYANSGSNVIGVDLSLCSGKTFD NHVVMMNQDDDYNYDSCNFNIIDKISRENYFSKYCGSTLLTIWSLYNIPLPKSEVNIAIGKSQLCHIFEPLMTSN >Mature_155_residues MKSNIKEMFPVWVNDNKYYDLIMSNDLDSFFSCQLLETVKGWKPNYFNSDFKSMGITEYANSGSNVIGVDLSLCSGKTFD NHVVMMNQDDDYNYDSCNFNIIDKISRENYFSKYCGSTLLTIWSLYNIPLPKSEVNIAIGKSQLCHIFEPLMTSN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17834; Mature: 17834
Theoretical pI: Translated: 4.53; Mature: 4.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.2 %Cys (Translated Protein) 4.5 %Met (Translated Protein) 7.7 %Cys+Met (Translated Protein) 3.2 %Cys (Mature Protein) 4.5 %Met (Mature Protein) 7.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKSNIKEMFPVWVNDNKYYDLIMSNDLDSFFSCQLLETVKGWKPNYFNSDFKSMGITEYA CCCCCCHHCCEEECCCEEEEEEECCCCCHHHHHHHHHHHCCCCCCCCCCCHHHCCCHHHH NSGSNVIGVDLSLCSGKTFDNHVVMMNQDDDYNYDSCNFNIIDKISRENYFSKYCGSTLL CCCCCEEEEEEEECCCCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH TIWSLYNIPLPKSEVNIAIGKSQLCHIFEPLMTSN HHHHHHCCCCCCCCEEEEECCHHHHHHHHHHHCCC >Mature Secondary Structure MKSNIKEMFPVWVNDNKYYDLIMSNDLDSFFSCQLLETVKGWKPNYFNSDFKSMGITEYA CCCCCCHHCCEEECCCEEEEEEECCCCCHHHHHHHHHHHCCCCCCCCCCCHHHCCCHHHH NSGSNVIGVDLSLCSGKTFDNHVVMMNQDDDYNYDSCNFNIIDKISRENYFSKYCGSTLL CCCCCEEEEEEEECCCCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH TIWSLYNIPLPKSEVNIAIGKSQLCHIFEPLMTSN HHHHHHCCCCCCCCEEEEECCHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA