| Definition | Desulfotomaculum reducens MI-1 chromosome, complete genome. |
|---|---|
| Accession | NC_009253 |
| Length | 3,608,104 |
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The map label for this gene is 134299981
Identifier: 134299981
GI number: 134299981
Start: 2333909
End: 2334766
Strand: Reverse
Name: 134299981
Synonym: Dred_2135
Alternate gene names: NA
Gene position: 2334766-2333909 (Counterclockwise)
Preceding gene: 134299982
Following gene: 134299980
Centisome position: 64.71
GC content: 35.78
Gene sequence:
>858_bases ATGTTTACACAAGATAAGTTTGTTACTGGTCAATCTATTGATATGAAAGATGTTTTAATTCAAACTACCCCTATTTTAAC TCCCTTTACAACTTTACTGTTGCCTAAAACAGTTAAGGCAGAAAATGCTACTTTAAATTGGATTGAAGAAGCAATCAATG AAAATGCCGCTGTGACACTTGGTGAAGGTGCTGACGCTCCTAATCCTGTAGATGATACCCTTACCCCTTGCAGTAACTAT TGTGAACTTGTTGGTGCTACTGCAACAGTTTCCAATACTGCCCAGGCCACAAATGCCAAAGGTATTTCTGACTTATTGGC ACATGAGACAGTAAAGAAAACTAAGGCCATGAAAATTAGAATGGAAAATATTTTAATCAATGGTACTAAGGGATATGTTT CCGCAACTAAAACCTATACCACAGATGGTATTTTGGCACAAATTAACCCTGCTAACAAAGTAACCAACGCTACTTTCACT AAGACAAAATTTGAGGAAGTTGTTGGTAAAATGTATGACGCTGGCGTTAATGATGAAATGCTCTGTTTCTTACCTGCACA AATGAAAATTCAACTAAATAGTTTTAGTAATGTTGAATTTTTGGCACGTGATATGTTTTTAGGTTTTGACACTGAAAGAT ATGTTACCCCTTATGGTATCGTAACTTTTGTATTATCTGAAAAATTAAACAATAAATTATTTATTGTGAATCCTAACTAT CTGGAATTAGCAGAATTAATTCCTTTCCATGCAGTACCCCAGGCAGTAAGCGGTTCTAAGCAATCTGTATATCTTGAAAC TCAGTTTGGCCTTAAACTCCTAAACACTAAGGCCGCCGCTAGTTTTGCAATTTCCTAG
Upstream 100 bases:
>100_bases GACAGTTACACCCAAGCCAAGAAAAATAACGATACCCTTGGTATGGTGAAAGCATTATTTAGCAAGTAATAAAAAATAAA AATTTAGGAGGATGATATTT
Downstream 100 bases:
>100_bases TTTATTTTCTTATGCCTAATTGGTCAGGGAAGGTCAAAGGGGATGGTTTAATACCGTCCCCTCTCTATTTAATGAAAGGG GTGACTATTTTGAACAAGGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 285; Mature: 285
Protein sequence:
>285_residues MFTQDKFVTGQSIDMKDVLIQTTPILTPFTTLLLPKTVKAENATLNWIEEAINENAAVTLGEGADAPNPVDDTLTPCSNY CELVGATATVSNTAQATNAKGISDLLAHETVKKTKAMKIRMENILINGTKGYVSATKTYTTDGILAQINPANKVTNATFT KTKFEEVVGKMYDAGVNDEMLCFLPAQMKIQLNSFSNVEFLARDMFLGFDTERYVTPYGIVTFVLSEKLNNKLFIVNPNY LELAELIPFHAVPQAVSGSKQSVYLETQFGLKLLNTKAAASFAIS
Sequences:
>Translated_285_residues MFTQDKFVTGQSIDMKDVLIQTTPILTPFTTLLLPKTVKAENATLNWIEEAINENAAVTLGEGADAPNPVDDTLTPCSNY CELVGATATVSNTAQATNAKGISDLLAHETVKKTKAMKIRMENILINGTKGYVSATKTYTTDGILAQINPANKVTNATFT KTKFEEVVGKMYDAGVNDEMLCFLPAQMKIQLNSFSNVEFLARDMFLGFDTERYVTPYGIVTFVLSEKLNNKLFIVNPNY LELAELIPFHAVPQAVSGSKQSVYLETQFGLKLLNTKAAASFAIS >Mature_285_residues MFTQDKFVTGQSIDMKDVLIQTTPILTPFTTLLLPKTVKAENATLNWIEEAINENAAVTLGEGADAPNPVDDTLTPCSNY CELVGATATVSNTAQATNAKGISDLLAHETVKKTKAMKIRMENILINGTKGYVSATKTYTTDGILAQINPANKVTNATFT KTKFEEVVGKMYDAGVNDEMLCFLPAQMKIQLNSFSNVEFLARDMFLGFDTERYVTPYGIVTFVLSEKLNNKLFIVNPNY LELAELIPFHAVPQAVSGSKQSVYLETQFGLKLLNTKAAASFAIS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31147; Mature: 31147
Theoretical pI: Translated: 4.96; Mature: 4.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFTQDKFVTGQSIDMKDVLIQTTPILTPFTTLLLPKTVKAENATLNWIEEAINENAAVTL CCCCCCCCCCCCCCHHHHHEECCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCEEEE GEGADAPNPVDDTLTPCSNYCELVGATATVSNTAQATNAKGISDLLAHETVKKTKAMKIR CCCCCCCCCCCCCCCCHHHHHHHHCCCEECCCCCHHCCCCCHHHHHHHHHHHHHHHHEEE MENILINGTKGYVSATKTYTTDGILAQINPANKVTNATFTKTKFEEVVGKMYDAGVNDEM EEEEEEECCCCEEEECEEEECCCEEEEECCCCCCCCCEEHHHHHHHHHHHHHCCCCCCCE LCFLPAQMKIQLNSFSNVEFLARDMFLGFDTERYVTPYGIVTFVLSEKLNNKLFIVNPNY EEEECCEEEEEECCCCCHHHHHHHHHHCCCCCCEECHHHHHHHHHHHHHCCEEEEECCCH LELAELIPFHAVPQAVSGSKQSVYLETQFGLKLLNTKAAASFAIS HHHHHHCCHHHCCHHHCCCCCEEEEEECCCEEEECCHHHHEEECC >Mature Secondary Structure MFTQDKFVTGQSIDMKDVLIQTTPILTPFTTLLLPKTVKAENATLNWIEEAINENAAVTL CCCCCCCCCCCCCCHHHHHEECCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCEEEE GEGADAPNPVDDTLTPCSNYCELVGATATVSNTAQATNAKGISDLLAHETVKKTKAMKIR CCCCCCCCCCCCCCCCHHHHHHHHCCCEECCCCCHHCCCCCHHHHHHHHHHHHHHHHEEE MENILINGTKGYVSATKTYTTDGILAQINPANKVTNATFTKTKFEEVVGKMYDAGVNDEM EEEEEEECCCCEEEECEEEECCCEEEEECCCCCCCCCEEHHHHHHHHHHHHHCCCCCCCE LCFLPAQMKIQLNSFSNVEFLARDMFLGFDTERYVTPYGIVTFVLSEKLNNKLFIVNPNY EEEECCEEEEEECCCCCHHHHHHHHHHCCCCCCEECHHHHHHHHHHHHHCCEEEEECCCH LELAELIPFHAVPQAVSGSKQSVYLETQFGLKLLNTKAAASFAIS HHHHHHCCHHHCCHHHCCCCCEEEEEECCCEEEECCHHHHEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA