| Definition | Desulfotomaculum reducens MI-1 chromosome, complete genome. |
|---|---|
| Accession | NC_009253 |
| Length | 3,608,104 |
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The map label for this gene is 134299977
Identifier: 134299977
GI number: 134299977
Start: 2327863
End: 2329890
Strand: Reverse
Name: 134299977
Synonym: Dred_2131
Alternate gene names: NA
Gene position: 2329890-2327863 (Counterclockwise)
Preceding gene: 134299980
Following gene: 134299976
Centisome position: 64.57
GC content: 26.87
Gene sequence:
>2028_bases ATGAATATTAAATGTATTATAGATACTGTAAGTTATAAATCTAAGCCACAAAATGGTGGAGCAGTTACAAATAGAATGAC ATTAGATACCGCAAAAGAATATTCTATAGAAGAAATTAAAGATAGTATTTTAAAGGGTAAAACTATTCGTCCCTCTTATT GTGGTAGTAGAGAAGAACAATGGAAATCTCAACAAATGTTTATGATTGATATTGATAATGAAGCGAATTTATCTGACGAT ATTATATTAAATGATTATGTGAAATTGGTTGAAGGTAAAAAGAATAAAGTTAGGTTCTTAGTAGGCAGTGAACAACATAG AAGTTATAATGATATTATTAATTATTGTAAAGAGATTAATTTAATACCTAATTTTGTTTACACATCATTTAATCATAAAG AAGAACAACATAAAATGAGATTAGTATATGTTTTAGATAATGTAATTACAGATAAAGATACAGCAAAAAGAATACAATTA TATTTAATGGATTGTATTGGTGATATTGATATACAATGTAAAAACTTAAATAGATTTTATTATGCTGGCAAAGAAATAGT ATTTGATTCTGGTAATATATTAGATTCTAATAATATTATAGAATTATCTAAGGATATTAGTATTGTGAGTACCCCTTCTA AAGCCAATAAGGACAATGGCTCAGAGAAATGTCCCCCTAATAATAAAGAAATATATAATAATTCCTATATTATTAGGGGG ACAAAAACCCCTAAGCCAGACAACACAGATATTAAAGACGATAATTATACCATTAAAGCCATTTCTAATAGAGATATAGA ATATTTAAAAAATAAATATGGCAGTGGAGAAAAGAAAATATTTAATAACAATCAAGAATTTGTTGATTACATTAGGAAAG AAATTAATTTAGGTGAATTATTAGAGTTTAAATATCCTAAATCAATAAGATGTATTTTCCATGAAGATAATAATAATTCA GCAAGTATATTCCAAGCAGATGATGGAGCATGGATTTATAAATGTTTTGGTTGTGGTGTAACTTATAATATATTAGGAGT TATTGAAGTTTTAGGGAAATTTAGAAGTAGACCTAAAGCATATAGATTTATTAGAGAAATATTTAATTTAGAGATACAAG AAACCGAGTGGCAGAAGGAACAAAAAGAAATACTATTAGAAAATATGAAGGTATTAAATAATGGTGAATTAGAACAGAAT TGCCCACAGACATTTAAGAATATTAAGAGCAATTTAAAATACATTAATCAATTATTGCTTATTGCTATGGATAATGTAAC AACTGAAAGAATGATTGACAATGACAACAATGTATTATTCTTTGCTTCTAATAAATTTATTGCTAAACAGTTAGGAATGA AAGAAGATAACTCCAAAGAAATATCTAAGAAAACAACTTTACTTGCTTATCATAAATTATTAAATAAAGTAGATAATTCG GAAGTGCCAGAGGATTTATTAAAGCGTAGTCAGGCAATAAGTATTAATTCACCAGATGATAAGAATAAAAAGTATAGACA CGTTAATTATTATTCTATTCCAAGTTATAATAATATGTTGTTTCCTGAGATTGAACAACAAGGCCAAGCATGGAAGGAAA ATAATTATACGATTAAAGGTTTAAGTAGGGAAATGTTCTTTAGAAAAGAAGGACAGAAAACTGCTGATTGGCTCTATCCT CAATATAAGCAAGTATATGATAAGCAACAAGAAACCATAGTTGATAGAACAACTACATATAGGAGCGATAAAAGGACAGA AATTATTGTTCATATTATTTTGTGGTATTTTGATGAAATAAATTATTGTTTAGAAAAGGATATAGTTTGTGAAATAGTTT TAGATCAAGAATTACGAATTAAAAGGAGCGAAGCAGAAAGACAGTTAAAAAAATCATTACCAGAAATATTAGATGCTTAT GGTTTGAGTAGAATCAGAGCCAACAAACAAATAAAGGAAAAACTAGGGATAGTCAGTAATGGCTATCCTTTTATTATTGT TAAAAACGATACCTTAGAGACATTGTAG
Upstream 100 bases:
>100_bases TTGAATAATTAATATTTAACCAGAGGGCTCATGTCGTGAGACAGCAATAAGTCCCTCTCTTTTTTTATGTCCATTTTTAG AAAAGGAGAGGAAATTTAAT
Downstream 100 bases:
>100_bases TTAAATCTAAATAACTGGCTCTAAAATCGTTCAAAATTTCAATTACATAGAAATACACTACCAAGGGGTTAAAGCATGGT ATACGGGGTTCAAATTCCGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 675; Mature: 675
Protein sequence:
>675_residues MNIKCIIDTVSYKSKPQNGGAVTNRMTLDTAKEYSIEEIKDSILKGKTIRPSYCGSREEQWKSQQMFMIDIDNEANLSDD IILNDYVKLVEGKKNKVRFLVGSEQHRSYNDIINYCKEINLIPNFVYTSFNHKEEQHKMRLVYVLDNVITDKDTAKRIQL YLMDCIGDIDIQCKNLNRFYYAGKEIVFDSGNILDSNNIIELSKDISIVSTPSKANKDNGSEKCPPNNKEIYNNSYIIRG TKTPKPDNTDIKDDNYTIKAISNRDIEYLKNKYGSGEKKIFNNNQEFVDYIRKEINLGELLEFKYPKSIRCIFHEDNNNS ASIFQADDGAWIYKCFGCGVTYNILGVIEVLGKFRSRPKAYRFIREIFNLEIQETEWQKEQKEILLENMKVLNNGELEQN CPQTFKNIKSNLKYINQLLLIAMDNVTTERMIDNDNNVLFFASNKFIAKQLGMKEDNSKEISKKTTLLAYHKLLNKVDNS EVPEDLLKRSQAISINSPDDKNKKYRHVNYYSIPSYNNMLFPEIEQQGQAWKENNYTIKGLSREMFFRKEGQKTADWLYP QYKQVYDKQQETIVDRTTTYRSDKRTEIIVHIILWYFDEINYCLEKDIVCEIVLDQELRIKRSEAERQLKKSLPEILDAY GLSRIRANKQIKEKLGIVSNGYPFIIVKNDTLETL
Sequences:
>Translated_675_residues MNIKCIIDTVSYKSKPQNGGAVTNRMTLDTAKEYSIEEIKDSILKGKTIRPSYCGSREEQWKSQQMFMIDIDNEANLSDD IILNDYVKLVEGKKNKVRFLVGSEQHRSYNDIINYCKEINLIPNFVYTSFNHKEEQHKMRLVYVLDNVITDKDTAKRIQL YLMDCIGDIDIQCKNLNRFYYAGKEIVFDSGNILDSNNIIELSKDISIVSTPSKANKDNGSEKCPPNNKEIYNNSYIIRG TKTPKPDNTDIKDDNYTIKAISNRDIEYLKNKYGSGEKKIFNNNQEFVDYIRKEINLGELLEFKYPKSIRCIFHEDNNNS ASIFQADDGAWIYKCFGCGVTYNILGVIEVLGKFRSRPKAYRFIREIFNLEIQETEWQKEQKEILLENMKVLNNGELEQN CPQTFKNIKSNLKYINQLLLIAMDNVTTERMIDNDNNVLFFASNKFIAKQLGMKEDNSKEISKKTTLLAYHKLLNKVDNS EVPEDLLKRSQAISINSPDDKNKKYRHVNYYSIPSYNNMLFPEIEQQGQAWKENNYTIKGLSREMFFRKEGQKTADWLYP QYKQVYDKQQETIVDRTTTYRSDKRTEIIVHIILWYFDEINYCLEKDIVCEIVLDQELRIKRSEAERQLKKSLPEILDAY GLSRIRANKQIKEKLGIVSNGYPFIIVKNDTLETL >Mature_675_residues MNIKCIIDTVSYKSKPQNGGAVTNRMTLDTAKEYSIEEIKDSILKGKTIRPSYCGSREEQWKSQQMFMIDIDNEANLSDD IILNDYVKLVEGKKNKVRFLVGSEQHRSYNDIINYCKEINLIPNFVYTSFNHKEEQHKMRLVYVLDNVITDKDTAKRIQL YLMDCIGDIDIQCKNLNRFYYAGKEIVFDSGNILDSNNIIELSKDISIVSTPSKANKDNGSEKCPPNNKEIYNNSYIIRG TKTPKPDNTDIKDDNYTIKAISNRDIEYLKNKYGSGEKKIFNNNQEFVDYIRKEINLGELLEFKYPKSIRCIFHEDNNNS ASIFQADDGAWIYKCFGCGVTYNILGVIEVLGKFRSRPKAYRFIREIFNLEIQETEWQKEQKEILLENMKVLNNGELEQN CPQTFKNIKSNLKYINQLLLIAMDNVTTERMIDNDNNVLFFASNKFIAKQLGMKEDNSKEISKKTTLLAYHKLLNKVDNS EVPEDLLKRSQAISINSPDDKNKKYRHVNYYSIPSYNNMLFPEIEQQGQAWKENNYTIKGLSREMFFRKEGQKTADWLYP QYKQVYDKQQETIVDRTTTYRSDKRTEIIVHIILWYFDEINYCLEKDIVCEIVLDQELRIKRSEAERQLKKSLPEILDAY GLSRIRANKQIKEKLGIVSNGYPFIIVKNDTLETL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 78948; Mature: 78948
Theoretical pI: Translated: 7.79; Mature: 7.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNIKCIIDTVSYKSKPQNGGAVTNRMTLDTAKEYSIEEIKDSILKGKTIRPSYCGSREEQ CCEEEEEEECCCCCCCCCCCCEEEEEEECCHHHCCHHHHHHHHHCCCCCCCHHCCCCHHH WKSQQMFMIDIDNEANLSDDIILNDYVKLVEGKKNKVRFLVGSEQHRSYNDIINYCKEIN HCCCCEEEEECCCCCCCCCCCHHHHHHHHHCCCCCEEEEEECCCCCCCHHHHHHHHHHCC LIPNFVYTSFNHKEEQHKMRLVYVLDNVITDKDTAKRIQLYLMDCIGDIDIQCKNLNRFY CCCCHHEECCCCCCHHHHEEEEEEEHHHHCCCHHHHHHHHHHHHHCCCCEEEEECCCEEE YAGKEIVFDSGNILDSNNIIELSKDISIVSTPSKANKDNGSEKCPPNNKEIYNNSYIIRG ECCCEEEEECCCEECCCCEEEEECCCEEEECCCCCCCCCCCCCCCCCCCEEECCEEEEEC TKTPKPDNTDIKDDNYTIKAISNRDIEYLKNKYGSGEKKIFNNNQEFVDYIRKEINLGEL CCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHCCCCCHHHCCCCHHHHHHHHHHCCHHHH LEFKYPKSIRCIFHEDNNNSASIFQADDGAWIYKCFGCGVTYNILGVIEVLGKFRSRPKA HCCCCCCCEEEEEEECCCCCEEEEECCCCCEEEEEECCCCHHHHHHHHHHHHHHHCCHHH YRFIREIFNLEIQETEWQKEQKEILLENMKVLNNGELEQNCPQTFKNIKSNLKYINQLLL HHHHHHHHCCEEEHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHH IAMDNVTTERMIDNDNNVLFFASNKFIAKQLGMKEDNSKEISKKTTLLAYHKLLNKVDNS HHCCCCCHHHHCCCCCCEEEEECCCHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCC EVPEDLLKRSQAISINSPDDKNKKYRHVNYYSIPSYNNMLFPEIEQQGQAWKENNYTIKG CCCHHHHHCCCEEECCCCCCCCCCEEEEEEEECCCCCCCCCCCHHHCCCCCCCCCCEEEE LSREMFFRKEGQKTADWLYPQYKQVYDKQQETIVDRTTTYRSDKRTEIIVHIILWYFDEI CCHHHHHHHCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH NYCLEKDIVCEIVLDQELRIKRSEAERQLKKSLPEILDAYGLSRIRANKQIKEKLGIVSN HHHHCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCCC GYPFIIVKNDTLETL CCCEEEEECCCCCCC >Mature Secondary Structure MNIKCIIDTVSYKSKPQNGGAVTNRMTLDTAKEYSIEEIKDSILKGKTIRPSYCGSREEQ CCEEEEEEECCCCCCCCCCCCEEEEEEECCHHHCCHHHHHHHHHCCCCCCCHHCCCCHHH WKSQQMFMIDIDNEANLSDDIILNDYVKLVEGKKNKVRFLVGSEQHRSYNDIINYCKEIN HCCCCEEEEECCCCCCCCCCCHHHHHHHHHCCCCCEEEEEECCCCCCCHHHHHHHHHHCC LIPNFVYTSFNHKEEQHKMRLVYVLDNVITDKDTAKRIQLYLMDCIGDIDIQCKNLNRFY CCCCHHEECCCCCCHHHHEEEEEEEHHHHCCCHHHHHHHHHHHHHCCCCEEEEECCCEEE YAGKEIVFDSGNILDSNNIIELSKDISIVSTPSKANKDNGSEKCPPNNKEIYNNSYIIRG ECCCEEEEECCCEECCCCEEEEECCCEEEECCCCCCCCCCCCCCCCCCCEEECCEEEEEC TKTPKPDNTDIKDDNYTIKAISNRDIEYLKNKYGSGEKKIFNNNQEFVDYIRKEINLGEL CCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHCCCCCHHHCCCCHHHHHHHHHHCCHHHH LEFKYPKSIRCIFHEDNNNSASIFQADDGAWIYKCFGCGVTYNILGVIEVLGKFRSRPKA HCCCCCCCEEEEEEECCCCCEEEEECCCCCEEEEEECCCCHHHHHHHHHHHHHHHCCHHH YRFIREIFNLEIQETEWQKEQKEILLENMKVLNNGELEQNCPQTFKNIKSNLKYINQLLL HHHHHHHHCCEEEHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHH IAMDNVTTERMIDNDNNVLFFASNKFIAKQLGMKEDNSKEISKKTTLLAYHKLLNKVDNS HHCCCCCHHHHCCCCCCEEEEECCCHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCC EVPEDLLKRSQAISINSPDDKNKKYRHVNYYSIPSYNNMLFPEIEQQGQAWKENNYTIKG CCCHHHHHCCCEEECCCCCCCCCCEEEEEEEECCCCCCCCCCCHHHCCCCCCCCCCEEEE LSREMFFRKEGQKTADWLYPQYKQVYDKQQETIVDRTTTYRSDKRTEIIVHIILWYFDEI CCHHHHHHHCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH NYCLEKDIVCEIVLDQELRIKRSEAERQLKKSLPEILDAYGLSRIRANKQIKEKLGIVSN HHHHCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCCC GYPFIIVKNDTLETL CCCEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA