| Definition | Desulfotomaculum reducens MI-1 chromosome, complete genome. |
|---|---|
| Accession | NC_009253 |
| Length | 3,608,104 |
Click here to switch to the map view.
The map label for this gene is 134299976
Identifier: 134299976
GI number: 134299976
Start: 2327316
End: 2327714
Strand: Reverse
Name: 134299976
Synonym: Dred_2130
Alternate gene names: NA
Gene position: 2327714-2327316 (Counterclockwise)
Preceding gene: 134299977
Following gene: 134299975
Centisome position: 64.51
GC content: 30.83
Gene sequence:
>399_bases TTGGCTAGATATAGGAATGATCTAGAACTTGCATTAAGCAAGATCAGCGAGAAAAAGAGAAAATACTTTAGGTGGAAATT TAATATTCCATTTGGTGGTAGACCGATGAATCAAACTACTATAGAAGAAATATGTAAATATACAAATGTAAAAAATCCCC AATACTTTTCTGACTGGGAAAAGACAACTGAATATGAGTATTTAGTTAATATTTATCTAAACTCAAAAACTGCTAATGAT TTATTAGAAATTTACAATATTGTTGCTGAAAAGGCCAAACAGGGCGATGCTAAAGCAATAGATACCTTGCTTAAATTGCA AAAGGAGATTCAAGCCAATATTAAATCAGCAAAAAGGAAAGAAAAAGATATTGCCGATGATGATGGATTAGAATTGTAG
Upstream 100 bases:
>100_bases AGAAATACACTACCAAGGGGTTAAAGCATGGTATACGGGGTTCAAATTCCGTATTAAGTCCATGTTTTTAATCCCTTTAT AGTTGAAGGAGGTTATTAAT
Downstream 100 bases:
>100_bases GTGATGGTTAATGGCAAGAACCCCACAAAGAAGCACCCAGGATAAACTAAAGATAATTAATGCTGATTTTAAATTATGGG CTAAGAATTTTGTAAAGATA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 132; Mature: 131
Protein sequence:
>132_residues MARYRNDLELALSKISEKKRKYFRWKFNIPFGGRPMNQTTIEEICKYTNVKNPQYFSDWEKTTEYEYLVNIYLNSKTAND LLEIYNIVAEKAKQGDAKAIDTLLKLQKEIQANIKSAKRKEKDIADDDGLEL
Sequences:
>Translated_132_residues MARYRNDLELALSKISEKKRKYFRWKFNIPFGGRPMNQTTIEEICKYTNVKNPQYFSDWEKTTEYEYLVNIYLNSKTAND LLEIYNIVAEKAKQGDAKAIDTLLKLQKEIQANIKSAKRKEKDIADDDGLEL >Mature_131_residues ARYRNDLELALSKISEKKRKYFRWKFNIPFGGRPMNQTTIEEICKYTNVKNPQYFSDWEKTTEYEYLVNIYLNSKTANDL LEIYNIVAEKAKQGDAKAIDTLLKLQKEIQANIKSAKRKEKDIADDDGLEL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15535; Mature: 15404
Theoretical pI: Translated: 9.21; Mature: 9.21
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARYRNDLELALSKISEKKRKYFRWKFNIPFGGRPMNQTTIEEICKYTNVKNPQYFSDWE CCCCHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCCHHHHHHHHHHCCCCCCCHHHHHH KTTEYEYLVNIYLNSKTANDLLEIYNIVAEKAKQGDAKAIDTLLKLQKEIQANIKSAKRK HHCCCEEEEEEEECCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH EKDIADDDGLEL HHCCCCCCCCCC >Mature Secondary Structure ARYRNDLELALSKISEKKRKYFRWKFNIPFGGRPMNQTTIEEICKYTNVKNPQYFSDWE CCCHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCCHHHHHHHHHHCCCCCCCHHHHHH KTTEYEYLVNIYLNSKTANDLLEIYNIVAEKAKQGDAKAIDTLLKLQKEIQANIKSAKRK HHCCCEEEEEEEECCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH EKDIADDDGLEL HHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA