| Definition | Desulfotomaculum reducens MI-1 chromosome, complete genome. |
|---|---|
| Accession | NC_009253 |
| Length | 3,608,104 |
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The map label for this gene is 134299975
Identifier: 134299975
GI number: 134299975
Start: 2325722
End: 2327305
Strand: Reverse
Name: 134299975
Synonym: Dred_2129
Alternate gene names: NA
Gene position: 2327305-2325722 (Counterclockwise)
Preceding gene: 134299976
Following gene: 134299974
Centisome position: 64.5
GC content: 33.52
Gene sequence:
>1584_bases ATGGCAAGAACCCCACAAAGAAGCACCCAGGATAAACTAAAGATAATTAATGCTGATTTTAAATTATGGGCTAAGAATTT TGTAAAGATAGTTGATAATAATGGAGATGAAATTCCTTTTATCTTGAATGAGCAACAAGATTATTTTTATCAGAACATGG ATAAATTTAATATAATCAGCAAGAGCCGCCAATTAGGATTTACGACATATAGTTTGGCATATTGTTTGTGGCTTGCTTGC ACTAGAGCAAATACTAACTGTCTGATAGTTTCATACAATGTAGAATCAACACAATCCATTTTTGAGAGATTAAAACAAAT GTATGCTTCTATTCCAGATAAATATAAGCCAGCGGAAAAACGTAATAACCGTATGGAATTATTGTTAGAAAATAATTCAA GAATTATCGTTAAGACCGCAGGAAATAAATCCTTGGGGCGTGGTATGACGCTTCAGTATGTTCTATTGAGCGAATTTGCC TTTTATCCAGACGATCAACAAAGAGATTCATTAGTTAGTTTGGAGCAAGCACTAGCCAAGAATAATGACAGTAAGATAGT TATTGAGACAACTTCTAATGGTTACAATTATTACCAAAAATTATTTATGTCTGCCTATAAAGGTAATTCAAAATATAAAA GTTTCTTTTTTCCTTGGTTTTCTTCTGCTACAAGTAAACAATTTAAGCATGAGATAGAATTGGCTGAGAAATGGTTTAGA GCAAACAATAAAGGTCATAGAATGGAGCCAGAACATTTAGAGCGTGATGAGGTTGCCCTTCGAGAAAAAGGAATCTCCTT TAAATTGTTAATGTGGAGAAGGTGGAAACTAGAGGATATTGACACTGAGGATTTTCAGCAAGAATATCCAAGTACGCCAG AGGAAAGTTTTAAGGCCACAAGTCGATCAGTTTTTGATACGCAGAAAATTACGGAGCGAATTAATTATATCCTTCTTCCC CTTCGAGTGAATGAAGTGAATAAAAAATTATCGCAAACTCTTGATTCTTATTTGAACAAGAGTTTTTTTATTTACCGAAA TGTTAAATCTAACGAGCGATATTTTATCGGCGTTGATACTTCTTCTGGTAGTGGTGGAGATTATTCTGCTGTCAGTGTAT TCGATAGCCAGGGGGAGCAAATAGCAACATTCTATGATAATAAAATTCCTGTCTATAAATTTGCCCAGGTAGTTTATGAC ATTGGAATGTATTTTAATTATGGTTTCTTAGTTGTTGAGAAAAATTCCTTTGGACAATCAGTAATTGAAAAGTTAAGGAC TGAGTTTGGATATTTGAATATGTACAAGATGAAGCAGTTTGATGAAAGAGGACGTAAGCGATATAAAATTGGATGGGTTA CTACCAGCGTCACTAAACCTAAATTAATTAGTGATTATAAAGAGCAGTTTGAAATGGACTTAATTCTATTGAATGATAAT GAGACATTAGAAGAAATGAAAATATTTACAAGTTATGAAAACGGTAAGACAGGAAATATCAGAGGTGAAGGTTTCCATGA TGATATGGTTATTGCTTCTGCATTAGCCATACAAGGGATGAAAAGCGGTAAATGGTATGTTTGA
Upstream 100 bases:
>100_bases CTTAAATTGCAAAAGGAGATTCAAGCCAATATTAAATCAGCAAAAAGGAAAGAAAAAGATATTGCCGATGATGATGGATT AGAATTGTAGGTGATGGTTA
Downstream 100 bases:
>100_bases CATTAAATTGTTTCACGTGAAACATATATTATAATTGACAACTTAATCATTTGTCAAGGTGTCAATTTTAGATAAGGAGG GGTTAACTTTGAATTTACAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 527; Mature: 526
Protein sequence:
>527_residues MARTPQRSTQDKLKIINADFKLWAKNFVKIVDNNGDEIPFILNEQQDYFYQNMDKFNIISKSRQLGFTTYSLAYCLWLAC TRANTNCLIVSYNVESTQSIFERLKQMYASIPDKYKPAEKRNNRMELLLENNSRIIVKTAGNKSLGRGMTLQYVLLSEFA FYPDDQQRDSLVSLEQALAKNNDSKIVIETTSNGYNYYQKLFMSAYKGNSKYKSFFFPWFSSATSKQFKHEIELAEKWFR ANNKGHRMEPEHLERDEVALREKGISFKLLMWRRWKLEDIDTEDFQQEYPSTPEESFKATSRSVFDTQKITERINYILLP LRVNEVNKKLSQTLDSYLNKSFFIYRNVKSNERYFIGVDTSSGSGGDYSAVSVFDSQGEQIATFYDNKIPVYKFAQVVYD IGMYFNYGFLVVEKNSFGQSVIEKLRTEFGYLNMYKMKQFDERGRKRYKIGWVTTSVTKPKLISDYKEQFEMDLILLNDN ETLEEMKIFTSYENGKTGNIRGEGFHDDMVIASALAIQGMKSGKWYV
Sequences:
>Translated_527_residues MARTPQRSTQDKLKIINADFKLWAKNFVKIVDNNGDEIPFILNEQQDYFYQNMDKFNIISKSRQLGFTTYSLAYCLWLAC TRANTNCLIVSYNVESTQSIFERLKQMYASIPDKYKPAEKRNNRMELLLENNSRIIVKTAGNKSLGRGMTLQYVLLSEFA FYPDDQQRDSLVSLEQALAKNNDSKIVIETTSNGYNYYQKLFMSAYKGNSKYKSFFFPWFSSATSKQFKHEIELAEKWFR ANNKGHRMEPEHLERDEVALREKGISFKLLMWRRWKLEDIDTEDFQQEYPSTPEESFKATSRSVFDTQKITERINYILLP LRVNEVNKKLSQTLDSYLNKSFFIYRNVKSNERYFIGVDTSSGSGGDYSAVSVFDSQGEQIATFYDNKIPVYKFAQVVYD IGMYFNYGFLVVEKNSFGQSVIEKLRTEFGYLNMYKMKQFDERGRKRYKIGWVTTSVTKPKLISDYKEQFEMDLILLNDN ETLEEMKIFTSYENGKTGNIRGEGFHDDMVIASALAIQGMKSGKWYV >Mature_526_residues ARTPQRSTQDKLKIINADFKLWAKNFVKIVDNNGDEIPFILNEQQDYFYQNMDKFNIISKSRQLGFTTYSLAYCLWLACT RANTNCLIVSYNVESTQSIFERLKQMYASIPDKYKPAEKRNNRMELLLENNSRIIVKTAGNKSLGRGMTLQYVLLSEFAF YPDDQQRDSLVSLEQALAKNNDSKIVIETTSNGYNYYQKLFMSAYKGNSKYKSFFFPWFSSATSKQFKHEIELAEKWFRA NNKGHRMEPEHLERDEVALREKGISFKLLMWRRWKLEDIDTEDFQQEYPSTPEESFKATSRSVFDTQKITERINYILLPL RVNEVNKKLSQTLDSYLNKSFFIYRNVKSNERYFIGVDTSSGSGGDYSAVSVFDSQGEQIATFYDNKIPVYKFAQVVYDI GMYFNYGFLVVEKNSFGQSVIEKLRTEFGYLNMYKMKQFDERGRKRYKIGWVTTSVTKPKLISDYKEQFEMDLILLNDNE TLEEMKIFTSYENGKTGNIRGEGFHDDMVIASALAIQGMKSGKWYV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 61702; Mature: 61570
Theoretical pI: Translated: 9.11; Mature: 9.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARTPQRSTQDKLKIINADFKLWAKNFVKIVDNNGDEIPFILNEQQDYFYQNMDKFNIIS CCCCCCCCCCCCEEEECCCHHHHHHHHHEEECCCCCCCCEEECCCHHHHHHCCCHHHHHH KSRQLGFTTYSLAYCLWLACTRANTNCLIVSYNVESTQSIFERLKQMYASIPDKYKPAEK HCCCCCCHHHHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHHHHHHHCCCCCCCCHHH RNNRMELLLENNSRIIVKTAGNKSLGRGMTLQYVLLSEFAFYPDDQQRDSLVSLEQALAK CCCCEEEEEECCCEEEEEECCCCCCCCCCEEEHHHHHHHCCCCCCCCHHHHHHHHHHHHC NNDSKIVIETTSNGYNYYQKLFMSAYKGNSKYKSFFFPWFSSATSKQFKHEIELAEKWFR CCCCEEEEEECCCCHHHHHHHHHHHHCCCCCCCEEECHHHCCHHHHHHHHHHHHHHHHHH ANNKGHRMEPEHLERDEVALREKGISFKLLMWRRWKLEDIDTEDFQQEYPSTPEESFKAT CCCCCCCCCHHHCCHHHHHHHHCCCEEEEEEEEECCCCCCCCHHHHHHCCCCCHHHHHHH SRSVFDTQKITERINYILLPLRVNEVNKKLSQTLDSYLNKSFFIYRNVKSNERYFIGVDT HHHHHHHHHHHHHCCEEEEEEEHHHHHHHHHHHHHHHCCCCEEEEEECCCCCEEEEEEEC SSGSGGDYSAVSVFDSQGEQIATFYDNKIPVYKFAQVVYDIGMYFNYGFLVVEKNSFGQS CCCCCCCEEEEEEECCCCCEEEEEECCCCCHHHHHHHHHHHHHHCCCEEEEEECCCCCHH VIEKLRTEFGYLNMYKMKQFDERGRKRYKIGWVTTSVTKPKLISDYKEQFEMDLILLNDN HHHHHHHHHCCCCHHHHHHHHHCCCCEEEEEEEEECCCCCHHHHHHHHHCCEEEEEECCC ETLEEMKIFTSYENGKTGNIRGEGFHDDMVIASALAIQGMKSGKWYV CCHHHHHHHEECCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure ARTPQRSTQDKLKIINADFKLWAKNFVKIVDNNGDEIPFILNEQQDYFYQNMDKFNIIS CCCCCCCCCCCEEEECCCHHHHHHHHHEEECCCCCCCCEEECCCHHHHHHCCCHHHHHH KSRQLGFTTYSLAYCLWLACTRANTNCLIVSYNVESTQSIFERLKQMYASIPDKYKPAEK HCCCCCCHHHHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHHHHHHHCCCCCCCCHHH RNNRMELLLENNSRIIVKTAGNKSLGRGMTLQYVLLSEFAFYPDDQQRDSLVSLEQALAK CCCCEEEEEECCCEEEEEECCCCCCCCCCEEEHHHHHHHCCCCCCCCHHHHHHHHHHHHC NNDSKIVIETTSNGYNYYQKLFMSAYKGNSKYKSFFFPWFSSATSKQFKHEIELAEKWFR CCCCEEEEEECCCCHHHHHHHHHHHHCCCCCCCEEECHHHCCHHHHHHHHHHHHHHHHHH ANNKGHRMEPEHLERDEVALREKGISFKLLMWRRWKLEDIDTEDFQQEYPSTPEESFKAT CCCCCCCCCHHHCCHHHHHHHHCCCEEEEEEEEECCCCCCCCHHHHHHCCCCCHHHHHHH SRSVFDTQKITERINYILLPLRVNEVNKKLSQTLDSYLNKSFFIYRNVKSNERYFIGVDT HHHHHHHHHHHHHCCEEEEEEEHHHHHHHHHHHHHHHCCCCEEEEEECCCCCEEEEEEEC SSGSGGDYSAVSVFDSQGEQIATFYDNKIPVYKFAQVVYDIGMYFNYGFLVVEKNSFGQS CCCCCCCEEEEEEECCCCCEEEEEECCCCCHHHHHHHHHHHHHHCCCEEEEEECCCCCHH VIEKLRTEFGYLNMYKMKQFDERGRKRYKIGWVTTSVTKPKLISDYKEQFEMDLILLNDN HHHHHHHHHCCCCHHHHHHHHHCCCCEEEEEEEEECCCCCHHHHHHHHHCCEEEEEECCC ETLEEMKIFTSYENGKTGNIRGEGFHDDMVIASALAIQGMKSGKWYV CCHHHHHHHEECCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA