Definition Desulfotomaculum reducens MI-1 chromosome, complete genome.
Accession NC_009253
Length 3,608,104

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The map label for this gene is 134299975

Identifier: 134299975

GI number: 134299975

Start: 2325722

End: 2327305

Strand: Reverse

Name: 134299975

Synonym: Dred_2129

Alternate gene names: NA

Gene position: 2327305-2325722 (Counterclockwise)

Preceding gene: 134299976

Following gene: 134299974

Centisome position: 64.5

GC content: 33.52

Gene sequence:

>1584_bases
ATGGCAAGAACCCCACAAAGAAGCACCCAGGATAAACTAAAGATAATTAATGCTGATTTTAAATTATGGGCTAAGAATTT
TGTAAAGATAGTTGATAATAATGGAGATGAAATTCCTTTTATCTTGAATGAGCAACAAGATTATTTTTATCAGAACATGG
ATAAATTTAATATAATCAGCAAGAGCCGCCAATTAGGATTTACGACATATAGTTTGGCATATTGTTTGTGGCTTGCTTGC
ACTAGAGCAAATACTAACTGTCTGATAGTTTCATACAATGTAGAATCAACACAATCCATTTTTGAGAGATTAAAACAAAT
GTATGCTTCTATTCCAGATAAATATAAGCCAGCGGAAAAACGTAATAACCGTATGGAATTATTGTTAGAAAATAATTCAA
GAATTATCGTTAAGACCGCAGGAAATAAATCCTTGGGGCGTGGTATGACGCTTCAGTATGTTCTATTGAGCGAATTTGCC
TTTTATCCAGACGATCAACAAAGAGATTCATTAGTTAGTTTGGAGCAAGCACTAGCCAAGAATAATGACAGTAAGATAGT
TATTGAGACAACTTCTAATGGTTACAATTATTACCAAAAATTATTTATGTCTGCCTATAAAGGTAATTCAAAATATAAAA
GTTTCTTTTTTCCTTGGTTTTCTTCTGCTACAAGTAAACAATTTAAGCATGAGATAGAATTGGCTGAGAAATGGTTTAGA
GCAAACAATAAAGGTCATAGAATGGAGCCAGAACATTTAGAGCGTGATGAGGTTGCCCTTCGAGAAAAAGGAATCTCCTT
TAAATTGTTAATGTGGAGAAGGTGGAAACTAGAGGATATTGACACTGAGGATTTTCAGCAAGAATATCCAAGTACGCCAG
AGGAAAGTTTTAAGGCCACAAGTCGATCAGTTTTTGATACGCAGAAAATTACGGAGCGAATTAATTATATCCTTCTTCCC
CTTCGAGTGAATGAAGTGAATAAAAAATTATCGCAAACTCTTGATTCTTATTTGAACAAGAGTTTTTTTATTTACCGAAA
TGTTAAATCTAACGAGCGATATTTTATCGGCGTTGATACTTCTTCTGGTAGTGGTGGAGATTATTCTGCTGTCAGTGTAT
TCGATAGCCAGGGGGAGCAAATAGCAACATTCTATGATAATAAAATTCCTGTCTATAAATTTGCCCAGGTAGTTTATGAC
ATTGGAATGTATTTTAATTATGGTTTCTTAGTTGTTGAGAAAAATTCCTTTGGACAATCAGTAATTGAAAAGTTAAGGAC
TGAGTTTGGATATTTGAATATGTACAAGATGAAGCAGTTTGATGAAAGAGGACGTAAGCGATATAAAATTGGATGGGTTA
CTACCAGCGTCACTAAACCTAAATTAATTAGTGATTATAAAGAGCAGTTTGAAATGGACTTAATTCTATTGAATGATAAT
GAGACATTAGAAGAAATGAAAATATTTACAAGTTATGAAAACGGTAAGACAGGAAATATCAGAGGTGAAGGTTTCCATGA
TGATATGGTTATTGCTTCTGCATTAGCCATACAAGGGATGAAAAGCGGTAAATGGTATGTTTGA

Upstream 100 bases:

>100_bases
CTTAAATTGCAAAAGGAGATTCAAGCCAATATTAAATCAGCAAAAAGGAAAGAAAAAGATATTGCCGATGATGATGGATT
AGAATTGTAGGTGATGGTTA

Downstream 100 bases:

>100_bases
CATTAAATTGTTTCACGTGAAACATATATTATAATTGACAACTTAATCATTTGTCAAGGTGTCAATTTTAGATAAGGAGG
GGTTAACTTTGAATTTACAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 527; Mature: 526

Protein sequence:

>527_residues
MARTPQRSTQDKLKIINADFKLWAKNFVKIVDNNGDEIPFILNEQQDYFYQNMDKFNIISKSRQLGFTTYSLAYCLWLAC
TRANTNCLIVSYNVESTQSIFERLKQMYASIPDKYKPAEKRNNRMELLLENNSRIIVKTAGNKSLGRGMTLQYVLLSEFA
FYPDDQQRDSLVSLEQALAKNNDSKIVIETTSNGYNYYQKLFMSAYKGNSKYKSFFFPWFSSATSKQFKHEIELAEKWFR
ANNKGHRMEPEHLERDEVALREKGISFKLLMWRRWKLEDIDTEDFQQEYPSTPEESFKATSRSVFDTQKITERINYILLP
LRVNEVNKKLSQTLDSYLNKSFFIYRNVKSNERYFIGVDTSSGSGGDYSAVSVFDSQGEQIATFYDNKIPVYKFAQVVYD
IGMYFNYGFLVVEKNSFGQSVIEKLRTEFGYLNMYKMKQFDERGRKRYKIGWVTTSVTKPKLISDYKEQFEMDLILLNDN
ETLEEMKIFTSYENGKTGNIRGEGFHDDMVIASALAIQGMKSGKWYV

Sequences:

>Translated_527_residues
MARTPQRSTQDKLKIINADFKLWAKNFVKIVDNNGDEIPFILNEQQDYFYQNMDKFNIISKSRQLGFTTYSLAYCLWLAC
TRANTNCLIVSYNVESTQSIFERLKQMYASIPDKYKPAEKRNNRMELLLENNSRIIVKTAGNKSLGRGMTLQYVLLSEFA
FYPDDQQRDSLVSLEQALAKNNDSKIVIETTSNGYNYYQKLFMSAYKGNSKYKSFFFPWFSSATSKQFKHEIELAEKWFR
ANNKGHRMEPEHLERDEVALREKGISFKLLMWRRWKLEDIDTEDFQQEYPSTPEESFKATSRSVFDTQKITERINYILLP
LRVNEVNKKLSQTLDSYLNKSFFIYRNVKSNERYFIGVDTSSGSGGDYSAVSVFDSQGEQIATFYDNKIPVYKFAQVVYD
IGMYFNYGFLVVEKNSFGQSVIEKLRTEFGYLNMYKMKQFDERGRKRYKIGWVTTSVTKPKLISDYKEQFEMDLILLNDN
ETLEEMKIFTSYENGKTGNIRGEGFHDDMVIASALAIQGMKSGKWYV
>Mature_526_residues
ARTPQRSTQDKLKIINADFKLWAKNFVKIVDNNGDEIPFILNEQQDYFYQNMDKFNIISKSRQLGFTTYSLAYCLWLACT
RANTNCLIVSYNVESTQSIFERLKQMYASIPDKYKPAEKRNNRMELLLENNSRIIVKTAGNKSLGRGMTLQYVLLSEFAF
YPDDQQRDSLVSLEQALAKNNDSKIVIETTSNGYNYYQKLFMSAYKGNSKYKSFFFPWFSSATSKQFKHEIELAEKWFRA
NNKGHRMEPEHLERDEVALREKGISFKLLMWRRWKLEDIDTEDFQQEYPSTPEESFKATSRSVFDTQKITERINYILLPL
RVNEVNKKLSQTLDSYLNKSFFIYRNVKSNERYFIGVDTSSGSGGDYSAVSVFDSQGEQIATFYDNKIPVYKFAQVVYDI
GMYFNYGFLVVEKNSFGQSVIEKLRTEFGYLNMYKMKQFDERGRKRYKIGWVTTSVTKPKLISDYKEQFEMDLILLNDNE
TLEEMKIFTSYENGKTGNIRGEGFHDDMVIASALAIQGMKSGKWYV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 61702; Mature: 61570

Theoretical pI: Translated: 9.11; Mature: 9.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARTPQRSTQDKLKIINADFKLWAKNFVKIVDNNGDEIPFILNEQQDYFYQNMDKFNIIS
CCCCCCCCCCCCEEEECCCHHHHHHHHHEEECCCCCCCCEEECCCHHHHHHCCCHHHHHH
KSRQLGFTTYSLAYCLWLACTRANTNCLIVSYNVESTQSIFERLKQMYASIPDKYKPAEK
HCCCCCCHHHHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHHHHHHHCCCCCCCCHHH
RNNRMELLLENNSRIIVKTAGNKSLGRGMTLQYVLLSEFAFYPDDQQRDSLVSLEQALAK
CCCCEEEEEECCCEEEEEECCCCCCCCCCEEEHHHHHHHCCCCCCCCHHHHHHHHHHHHC
NNDSKIVIETTSNGYNYYQKLFMSAYKGNSKYKSFFFPWFSSATSKQFKHEIELAEKWFR
CCCCEEEEEECCCCHHHHHHHHHHHHCCCCCCCEEECHHHCCHHHHHHHHHHHHHHHHHH
ANNKGHRMEPEHLERDEVALREKGISFKLLMWRRWKLEDIDTEDFQQEYPSTPEESFKAT
CCCCCCCCCHHHCCHHHHHHHHCCCEEEEEEEEECCCCCCCCHHHHHHCCCCCHHHHHHH
SRSVFDTQKITERINYILLPLRVNEVNKKLSQTLDSYLNKSFFIYRNVKSNERYFIGVDT
HHHHHHHHHHHHHCCEEEEEEEHHHHHHHHHHHHHHHCCCCEEEEEECCCCCEEEEEEEC
SSGSGGDYSAVSVFDSQGEQIATFYDNKIPVYKFAQVVYDIGMYFNYGFLVVEKNSFGQS
CCCCCCCEEEEEEECCCCCEEEEEECCCCCHHHHHHHHHHHHHHCCCEEEEEECCCCCHH
VIEKLRTEFGYLNMYKMKQFDERGRKRYKIGWVTTSVTKPKLISDYKEQFEMDLILLNDN
HHHHHHHHHCCCCHHHHHHHHHCCCCEEEEEEEEECCCCCHHHHHHHHHCCEEEEEECCC
ETLEEMKIFTSYENGKTGNIRGEGFHDDMVIASALAIQGMKSGKWYV
CCHHHHHHHEECCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure 
ARTPQRSTQDKLKIINADFKLWAKNFVKIVDNNGDEIPFILNEQQDYFYQNMDKFNIIS
CCCCCCCCCCCEEEECCCHHHHHHHHHEEECCCCCCCCEEECCCHHHHHHCCCHHHHHH
KSRQLGFTTYSLAYCLWLACTRANTNCLIVSYNVESTQSIFERLKQMYASIPDKYKPAEK
HCCCCCCHHHHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHHHHHHHCCCCCCCCHHH
RNNRMELLLENNSRIIVKTAGNKSLGRGMTLQYVLLSEFAFYPDDQQRDSLVSLEQALAK
CCCCEEEEEECCCEEEEEECCCCCCCCCCEEEHHHHHHHCCCCCCCCHHHHHHHHHHHHC
NNDSKIVIETTSNGYNYYQKLFMSAYKGNSKYKSFFFPWFSSATSKQFKHEIELAEKWFR
CCCCEEEEEECCCCHHHHHHHHHHHHCCCCCCCEEECHHHCCHHHHHHHHHHHHHHHHHH
ANNKGHRMEPEHLERDEVALREKGISFKLLMWRRWKLEDIDTEDFQQEYPSTPEESFKAT
CCCCCCCCCHHHCCHHHHHHHHCCCEEEEEEEEECCCCCCCCHHHHHHCCCCCHHHHHHH
SRSVFDTQKITERINYILLPLRVNEVNKKLSQTLDSYLNKSFFIYRNVKSNERYFIGVDT
HHHHHHHHHHHHHCCEEEEEEEHHHHHHHHHHHHHHHCCCCEEEEEECCCCCEEEEEEEC
SSGSGGDYSAVSVFDSQGEQIATFYDNKIPVYKFAQVVYDIGMYFNYGFLVVEKNSFGQS
CCCCCCCEEEEEEECCCCCEEEEEECCCCCHHHHHHHHHHHHHHCCCEEEEEECCCCCHH
VIEKLRTEFGYLNMYKMKQFDERGRKRYKIGWVTTSVTKPKLISDYKEQFEMDLILLNDN
HHHHHHHHHCCCCHHHHHHHHHCCCCEEEEEEEEECCCCCHHHHHHHHHCCEEEEEECCC
ETLEEMKIFTSYENGKTGNIRGEGFHDDMVIASALAIQGMKSGKWYV
CCHHHHHHHEECCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA