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The map label for this gene is rbgA [H]

Identifier: 134299894

GI number: 134299894

Start: 2246755

End: 2247609

Strand: Reverse

Name: rbgA [H]

Synonym: Dred_2048

Alternate gene names: 134299894

Gene position: 2247609-2246755 (Counterclockwise)

Preceding gene: 134299895

Following gene: 134299893

Centisome position: 62.29

GC content: 46.08

Gene sequence:

>855_bases
GTGGATATTCAGATTCAGTGGTTTCCAGGGCACATGGCCAAAGCCAAACGTCAGGTGCAAGATGCTCTAAAATTGGTGGA
TGTAGCCTTTGAACTTTTGGATGCCCGTATTCCTGTTAGCAGCAGTAACCCAATGATTGATCAAATACTGGGGCAAAAAC
CAAGGGTGATTATTTTAAATAAAAGTGATCTTGCTGATCCAAGCATTACCAAGCAATGGCAACGGGCCTTGGATCGACCC
TATATTAAAGCTATAGCTGTGGATACTATTAAGGGAGAAGGACTCAAAGAGGTGCCAAGGGTGGCTTCTATGTTGGTGGC
CGAGCAGATGGCCAAACTTGCTGCCAAAGGAAGACGCCCCAGGGCCATTCGTTGTATGGTACTGGGTATACCTAACGTGG
GTAAGTCAACCTTTATTAACCGTCTGGTGGGCAGAAAAGCAACCAAGACCGGTGATACGCCGGGTGTTACCAAAGGCCAG
CAATGGATTCGGACCCAGGGTTCCTTAGAACTATTGGATACCCCGGGGATTCTGTGGCCAAAATTTGAAGACCCTGAAGT
CGGCTACAAGTTGGCTGTAACTGGCGCTATCAAAGAACAGGTTTTTGATATCTATGAAGTGTCCCTTAAACTTTTGCAAT
GGCTGGCTGAATATAACCCAGAGAAATTAAAGGAAAGATATAGAATGAATGAACTAAATCCGGAAGCCACAAAGCTATTA
TGGGATATTGGAGTCAAAAGAGGTCTGCTGGTATCTGGCGGTTTGGTGGACGAATCAAAGGTTGCCCAGCTTATTCTAAA
AGAGTTCCGGGAAGGACTCCTGGGACGTTACACCCTGGATTTACCCCCCATGTAA

Upstream 100 bases:

>100_bases
GATTAGTTTAGCTAAATAATATTTTTTAGATTTAAGCTTTCGAAGAGGCTGTTTCCGGGTAAACTCTTACGGAAGCTTTT
ATTTTTATGGAGGTACCAAA

Downstream 100 bases:

>100_bases
AATAACATAGTAATAAACAGGGAAGATTTCCCCTGGAAGCGAATACCCAGGGGAAATATAATGTTAATGATCCATGCATG
TTGACTAGCTAGAATGCTAT

Product: HSR1-like GTP-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 284; Mature: 284

Protein sequence:

>284_residues
MDIQIQWFPGHMAKAKRQVQDALKLVDVAFELLDARIPVSSSNPMIDQILGQKPRVIILNKSDLADPSITKQWQRALDRP
YIKAIAVDTIKGEGLKEVPRVASMLVAEQMAKLAAKGRRPRAIRCMVLGIPNVGKSTFINRLVGRKATKTGDTPGVTKGQ
QWIRTQGSLELLDTPGILWPKFEDPEVGYKLAVTGAIKEQVFDIYEVSLKLLQWLAEYNPEKLKERYRMNELNPEATKLL
WDIGVKRGLLVSGGLVDESKVAQLILKEFREGLLGRYTLDLPPM

Sequences:

>Translated_284_residues
MDIQIQWFPGHMAKAKRQVQDALKLVDVAFELLDARIPVSSSNPMIDQILGQKPRVIILNKSDLADPSITKQWQRALDRP
YIKAIAVDTIKGEGLKEVPRVASMLVAEQMAKLAAKGRRPRAIRCMVLGIPNVGKSTFINRLVGRKATKTGDTPGVTKGQ
QWIRTQGSLELLDTPGILWPKFEDPEVGYKLAVTGAIKEQVFDIYEVSLKLLQWLAEYNPEKLKERYRMNELNPEATKLL
WDIGVKRGLLVSGGLVDESKVAQLILKEFREGLLGRYTLDLPPM
>Mature_284_residues
MDIQIQWFPGHMAKAKRQVQDALKLVDVAFELLDARIPVSSSNPMIDQILGQKPRVIILNKSDLADPSITKQWQRALDRP
YIKAIAVDTIKGEGLKEVPRVASMLVAEQMAKLAAKGRRPRAIRCMVLGIPNVGKSTFINRLVGRKATKTGDTPGVTKGQ
QWIRTQGSLELLDTPGILWPKFEDPEVGYKLAVTGAIKEQVFDIYEVSLKLLQWLAEYNPEKLKERYRMNELNPEATKLL
WDIGVKRGLLVSGGLVDESKVAQLILKEFREGLLGRYTLDLPPM

Specific function: Binds GTP and GDP [H]

COG id: COG1161

COG function: function code R; Predicted GTPases

Gene ontology:

Cell location: Cytoplasm (Probable) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 G (guanine nucleotide-binding) domain [H]

Homologues:

Organism=Homo sapiens, GI93277113, Length=298, Percent_Identity=33.8926174496644, Blast_Score=149, Evalue=3e-36,
Organism=Homo sapiens, GI7019419, Length=256, Percent_Identity=27.734375, Blast_Score=77, Evalue=3e-14,
Organism=Homo sapiens, GI296317324, Length=289, Percent_Identity=25.2595155709343, Blast_Score=70, Evalue=2e-12,
Organism=Homo sapiens, GI9506611, Length=289, Percent_Identity=25.2595155709343, Blast_Score=70, Evalue=2e-12,
Organism=Caenorhabditis elegans, GI193211047, Length=229, Percent_Identity=30.5676855895196, Blast_Score=106, Evalue=1e-23,
Organism=Caenorhabditis elegans, GI17534827, Length=285, Percent_Identity=29.4736842105263, Blast_Score=83, Evalue=2e-16,
Organism=Caenorhabditis elegans, GI25143545, Length=270, Percent_Identity=26.6666666666667, Blast_Score=82, Evalue=4e-16,
Organism=Caenorhabditis elegans, GI115535155, Length=271, Percent_Identity=26.9372693726937, Blast_Score=80, Evalue=1e-15,
Organism=Caenorhabditis elegans, GI32563985, Length=256, Percent_Identity=28.90625, Blast_Score=78, Evalue=5e-15,
Organism=Caenorhabditis elegans, GI71990926, Length=256, Percent_Identity=28.90625, Blast_Score=78, Evalue=6e-15,
Organism=Caenorhabditis elegans, GI32563983, Length=256, Percent_Identity=28.90625, Blast_Score=77, Evalue=7e-15,
Organism=Caenorhabditis elegans, GI71982363, Length=187, Percent_Identity=27.807486631016, Blast_Score=69, Evalue=4e-12,
Organism=Saccharomyces cerevisiae, GI6320842, Length=277, Percent_Identity=29.2418772563177, Blast_Score=86, Evalue=5e-18,
Organism=Saccharomyces cerevisiae, GI6324381, Length=269, Percent_Identity=26.3940520446097, Blast_Score=72, Evalue=1e-13,
Organism=Saccharomyces cerevisiae, GI6323744, Length=225, Percent_Identity=27.1111111111111, Blast_Score=70, Evalue=5e-13,
Organism=Drosophila melanogaster, GI85815858, Length=308, Percent_Identity=29.8701298701299, Blast_Score=117, Evalue=9e-27,
Organism=Drosophila melanogaster, GI19922460, Length=263, Percent_Identity=28.5171102661597, Blast_Score=80, Evalue=2e-15,
Organism=Drosophila melanogaster, GI28572990, Length=183, Percent_Identity=29.5081967213115, Blast_Score=72, Evalue=5e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR023179
- InterPro:   IPR019991
- InterPro:   IPR016478
- InterPro:   IPR002917 [H]

Pfam domain/function: PF01926 MMR_HSR1 [H]

EC number: NA

Molecular weight: Translated: 31879; Mature: 31879

Theoretical pI: Translated: 10.17; Mature: 10.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDIQIQWFPGHMAKAKRQVQDALKLVDVAFELLDARIPVSSSNPMIDQILGQKPRVIILN
CCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHCCCCCEEEEC
KSDLADPSITKQWQRALDRPYIKAIAVDTIKGEGLKEVPRVASMLVAEQMAKLAAKGRRP
CCCCCCCHHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCC
RAIRCMVLGIPNVGKSTFINRLVGRKATKTGDTPGVTKGQQWIRTQGSLELLDTPGILWP
CEEEEEEEECCCCCHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHCCCCEEEECCCCCCCC
KFEDPEVGYKLAVTGAIKEQVFDIYEVSLKLLQWLAEYNPEKLKERYRMNELNPEATKLL
CCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCHHHHHHH
WDIGVKRGLLVSGGLVDESKVAQLILKEFREGLLGRYTLDLPPM
HHHHCCCCEEEECCCCCHHHHHHHHHHHHHHHHHCCEEECCCCC
>Mature Secondary Structure
MDIQIQWFPGHMAKAKRQVQDALKLVDVAFELLDARIPVSSSNPMIDQILGQKPRVIILN
CCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHCCCCCEEEEC
KSDLADPSITKQWQRALDRPYIKAIAVDTIKGEGLKEVPRVASMLVAEQMAKLAAKGRRP
CCCCCCCHHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCC
RAIRCMVLGIPNVGKSTFINRLVGRKATKTGDTPGVTKGQQWIRTQGSLELLDTPGILWP
CEEEEEEEECCCCCHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHCCCCEEEECCCCCCCC
KFEDPEVGYKLAVTGAIKEQVFDIYEVSLKLLQWLAEYNPEKLKERYRMNELNPEATKLL
CCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCHHHHHHH
WDIGVKRGLLVSGGLVDESKVAQLILKEFREGLLGRYTLDLPPM
HHHHCCCCEEEECCCCCHHHHHHHHHHHHHHHHHCCEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]