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The map label for this gene is 134299850

Identifier: 134299850

GI number: 134299850

Start: 2201638

End: 2202480

Strand: Reverse

Name: 134299850

Synonym: Dred_2003

Alternate gene names: NA

Gene position: 2202480-2201638 (Counterclockwise)

Preceding gene: 134299851

Following gene: 134299849

Centisome position: 61.04

GC content: 37.49

Gene sequence:

>843_bases
ATGAGACCCCTTTGGAAAGGTGCAGTAAGTTTTGGTTTAGTGTATGTGCCGGTTAAGATGTATGCCGCCACGGAAAAGAA
AAGCATAAAATTTAATTATCTACATGATAAATGTAAAACACCCATTCAATATCGTAGGTATTGCCCCTATTGTAATACGG
AAATAAACAACGAAGAAATTGTAAAAGGCTATGAATATGAAAAGGGTAAATATGTGGTGATGAAAGATGAAGACTTTGAA
AACTTGCCTGGAGAAAAAACAAAAAGCATTAACATTGTTGACTTTGTTGATTTAACTGATATTGATCCTCTTTATTTTGA
TAAGGGTTACTATCTAGCGCCGGGTGAAGGGGGACAAAAGGTCTACGAATTACTAAAAAGATCAATGCAAGAAACTGGCA
AAGTGGCGGTGGCTAAGGTTATCATTCGGGACAAAGAATCACTTGCTGCTCTTAGGGTGGCTGATGGTGTTCTTACTATT
AATACCATGTTTTACCCAGATGAAGTAAGAAAACCAAGTGGTATTCCAGAATTGGACTATGAAATAGAACTTCACGAAAA
TGAATTGAAAATGGCAGTAAATCTTATTAATAATTTATCAGCACCCTTTAAACCGGAAAAATACACAGATGAATATCGTC
AACAACTTTTAGAAGTGATCCAGGCAAAGATTGCTGGGGAAGAGGTAGAAGCAGTTCCTGCTGTCCAAACCGATAAAGTG
GTAGATCTAATGTCTGCATTGAAAGCAAGTATTGATCTGGCCAAACAGGAAAGGGATAACGCATTAAAGAAAGATGCCAC
TAAAAAGAAAACCACCAGGACAAAAAAGGCCACGGCCTCGTAA

Upstream 100 bases:

>100_bases
ATACCAAAGATCCACTCCCTAAATATAGGGCAGTGGATTTTTGTTATTCATTTCATTGCTAGAGTCGGGCATACTACAAG
AAAAACAATGGAGGAGAACT

Downstream 100 bases:

>100_bases
AAGGGGACAAGGATTGGCATGAACAACAGTAAGTTACCAAAGGTAAAACCTATGTTAGCTGTACCAGCAGACCCCTTTGA
TAGCAATGATTACTTATATG

Product: Ku domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 280; Mature: 280

Protein sequence:

>280_residues
MRPLWKGAVSFGLVYVPVKMYAATEKKSIKFNYLHDKCKTPIQYRRYCPYCNTEINNEEIVKGYEYEKGKYVVMKDEDFE
NLPGEKTKSINIVDFVDLTDIDPLYFDKGYYLAPGEGGQKVYELLKRSMQETGKVAVAKVIIRDKESLAALRVADGVLTI
NTMFYPDEVRKPSGIPELDYEIELHENELKMAVNLINNLSAPFKPEKYTDEYRQQLLEVIQAKIAGEEVEAVPAVQTDKV
VDLMSALKASIDLAKQERDNALKKDATKKKTTRTKKATAS

Sequences:

>Translated_280_residues
MRPLWKGAVSFGLVYVPVKMYAATEKKSIKFNYLHDKCKTPIQYRRYCPYCNTEINNEEIVKGYEYEKGKYVVMKDEDFE
NLPGEKTKSINIVDFVDLTDIDPLYFDKGYYLAPGEGGQKVYELLKRSMQETGKVAVAKVIIRDKESLAALRVADGVLTI
NTMFYPDEVRKPSGIPELDYEIELHENELKMAVNLINNLSAPFKPEKYTDEYRQQLLEVIQAKIAGEEVEAVPAVQTDKV
VDLMSALKASIDLAKQERDNALKKDATKKKTTRTKKATAS
>Mature_280_residues
MRPLWKGAVSFGLVYVPVKMYAATEKKSIKFNYLHDKCKTPIQYRRYCPYCNTEINNEEIVKGYEYEKGKYVVMKDEDFE
NLPGEKTKSINIVDFVDLTDIDPLYFDKGYYLAPGEGGQKVYELLKRSMQETGKVAVAKVIIRDKESLAALRVADGVLTI
NTMFYPDEVRKPSGIPELDYEIELHENELKMAVNLINNLSAPFKPEKYTDEYRQQLLEVIQAKIAGEEVEAVPAVQTDKV
VDLMSALKASIDLAKQERDNALKKDATKKKTTRTKKATAS

Specific function: Could be involved in DNA repair [H]

COG id: COG1273

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Ku domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006164
- InterPro:   IPR009187
- InterPro:   IPR016194 [H]

Pfam domain/function: PF02735 Ku [H]

EC number: NA

Molecular weight: Translated: 31902; Mature: 31902

Theoretical pI: Translated: 7.33; Mature: 7.33

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRPLWKGAVSFGLVYVPVKMYAATEKKSIKFNYLHDKCKTPIQYRRYCPYCNTEINNEEI
CCCHHHHHHHHCCCEEEHHHHHHCCCCCEEEEEEHHHHCCCHHHHHCCCCCCCCCCCHHH
VKGYEYEKGKYVVMKDEDFENLPGEKTKSINIVDFVDLTDIDPLYFDKGYYLAPGEGGQK
HCCEEECCCCEEEEECCCCCCCCCCCCCCEEEEEEECCCCCCCEEECCCEEECCCCCHHH
VYELLKRSMQETGKVAVAKVIIRDKESLAALRVADGVLTINTMFYPDEVRKPSGIPELDY
HHHHHHHHHHHHCCCHHHHHHHHCHHHHHHHHHHCCEEEEEEEECCHHHCCCCCCCCCCE
EIELHENELKMAVNLINNLSAPFKPEKYTDEYRQQLLEVIQAKIAGEEVEAVPAVQTDKV
EEEECHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCHHHH
VDLMSALKASIDLAKQERDNALKKDATKKKTTRTKKATAS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHCCCC
>Mature Secondary Structure
MRPLWKGAVSFGLVYVPVKMYAATEKKSIKFNYLHDKCKTPIQYRRYCPYCNTEINNEEI
CCCHHHHHHHHCCCEEEHHHHHHCCCCCEEEEEEHHHHCCCHHHHHCCCCCCCCCCCHHH
VKGYEYEKGKYVVMKDEDFENLPGEKTKSINIVDFVDLTDIDPLYFDKGYYLAPGEGGQK
HCCEEECCCCEEEEECCCCCCCCCCCCCCEEEEEEECCCCCCCEEECCCEEECCCCCHHH
VYELLKRSMQETGKVAVAKVIIRDKESLAALRVADGVLTINTMFYPDEVRKPSGIPELDY
HHHHHHHHHHHHCCCHHHHHHHHCHHHHHHHHHHCCEEEEEEEECCHHHCCCCCCCCCCE
EIELHENELKMAVNLINNLSAPFKPEKYTDEYRQQLLEVIQAKIAGEEVEAVPAVQTDKV
EEEECHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCHHHH
VDLMSALKASIDLAKQERDNALKKDATKKKTTRTKKATAS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA