Click here to switch to the map view.

The map label for this gene is spoVR [H]

Identifier: 134299851

GI number: 134299851

Start: 2202581

End: 2203993

Strand: Reverse

Name: spoVR [H]

Synonym: Dred_2004

Alternate gene names: 134299851

Gene position: 2203993-2202581 (Counterclockwise)

Preceding gene: 134299852

Following gene: 134299850

Centisome position: 61.08

GC content: 38.71

Gene sequence:

>1413_bases
ATGAGAGATCAAATCAACGAGGAGTTACGTCAATTAGAAGAGAGTATTCCGAAAATAATTAAAATTGCTCAGGATTTTAA
GTTGGATTTTTACCCGATGCGATTTGAAATATGCCCTGGGGAAATCATCTACACCTTTGGTGCCTATGGCATGCCCACTC
GTTTTACACACTGGTCCTTTGGGAAATCATATCACAGGATGAAAACACAGTATGATTATAATTTAAGCAGAATCTATGAA
ATGGTTATTAATTCAGATCCTTGCTATGCATTTCTGTTGGAGGGTAATACCATCATTCAAAACAAAATGGTGGCAGCACA
TGTACTAGCCCACTGTGACTTTTTTAAAAATAATATTTACTTTAGCCATACAAACCCGAAGGATATCATTGAGTCCATGG
CTGTAGCTGCAGAAAGATTTCGCCAATATGAAATGATTTACGGACAGCAAAAAGTAGAGGCTTTTATTGACTCAGTTTTA
TCGATCCAGGAGCACATAGATCCCCATAGAATGATAAAACGAAAAGAGCATTGCATAAACAAAACGAAAAACTGTTGTGG
CAAAAAACAGGACGCAACCTATGACGACCTTTGGAAGTTAGATCAGCCAGAACATTCTTGTCAATGCCAGGGTGATTGCT
CAAAGAACAAGCAGACCAAATTACCCGAACAACCGGAAAAGGACCTTCTCTTGTTTATTATGGAAAATGCCAGGGATTTG
GAAGAATGGCAATTGGATATATTATCAACGATGAGAGATGAAATGCTTTATTTCTGGCCACAAATGCAAACAAAAATCAT
GAATGAGGGATGGGCCTCTTACTGGCATCTAAGAATAATGAGGGAAATGGAAATTAATGAGGCCGAAGCTATTGAATTTG
CGAAGATGCATGCCGGCGTAGTTCTACCCTCCCGCAACAGCATTAACCCCTATTACCTCGGATTGAAAATGTTGGAAGAT
ATTGAAAAACGCTGGGATAAAGAGTATGGAGAAGGGGCCGGCAGAGAAAAGTTGTTTGAAATAAGAGAGATGGACAACGA
TATTTCTTTCCTGCGAAATTACTTAACGAAAGAGTTAGTTGAGGAACTGGATTTGTACCTCTATCGGAAGATTGGCCATG
AGTGGAAAATAGTGGAGAAAAACTGGGAAAAAGTGAGGGACCATCTGGTCTATAGTATGACCAATTCTGGATTTCCGGTT
ATTATGGTGGAAAATGGGGACTATGAACAACGGGGTGAACTTTATCTTAAGCATGCTTTTGAAGACCGGGAGTTGGATAT
TAAATATCTAGAAAAGACACTGGTGCATATCTTTAATCTTTGGAATCGACCAGTTTACATTGAAACTGAAATTGACAATA
AAGCTGCTTTATTCTCCTTTGATGGAGCAAAGGGTAGTCGTAAATTTTTATAA

Upstream 100 bases:

>100_bases
GCCCGTCCTTTGTTAGTGTAACAATTCGGGATAAAACAGGGGTATATCCAGCACTTAAAGCCTTTTTCAAAAAACCCGAC
CAAGGGGGAGGGTAGATGAT

Downstream 100 bases:

>100_bases
ATACCAAAGATCCACTCCCTAAATATAGGGCAGTGGATTTTTGTTATTCATTTCATTGCTAGAGTCGGGCATACTACAAG
AAAAACAATGGAGGAGAACT

Product: SpoVR family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 470; Mature: 470

Protein sequence:

>470_residues
MRDQINEELRQLEESIPKIIKIAQDFKLDFYPMRFEICPGEIIYTFGAYGMPTRFTHWSFGKSYHRMKTQYDYNLSRIYE
MVINSDPCYAFLLEGNTIIQNKMVAAHVLAHCDFFKNNIYFSHTNPKDIIESMAVAAERFRQYEMIYGQQKVEAFIDSVL
SIQEHIDPHRMIKRKEHCINKTKNCCGKKQDATYDDLWKLDQPEHSCQCQGDCSKNKQTKLPEQPEKDLLLFIMENARDL
EEWQLDILSTMRDEMLYFWPQMQTKIMNEGWASYWHLRIMREMEINEAEAIEFAKMHAGVVLPSRNSINPYYLGLKMLED
IEKRWDKEYGEGAGREKLFEIREMDNDISFLRNYLTKELVEELDLYLYRKIGHEWKIVEKNWEKVRDHLVYSMTNSGFPV
IMVENGDYEQRGELYLKHAFEDRELDIKYLEKTLVHIFNLWNRPVYIETEIDNKAALFSFDGAKGSRKFL

Sequences:

>Translated_470_residues
MRDQINEELRQLEESIPKIIKIAQDFKLDFYPMRFEICPGEIIYTFGAYGMPTRFTHWSFGKSYHRMKTQYDYNLSRIYE
MVINSDPCYAFLLEGNTIIQNKMVAAHVLAHCDFFKNNIYFSHTNPKDIIESMAVAAERFRQYEMIYGQQKVEAFIDSVL
SIQEHIDPHRMIKRKEHCINKTKNCCGKKQDATYDDLWKLDQPEHSCQCQGDCSKNKQTKLPEQPEKDLLLFIMENARDL
EEWQLDILSTMRDEMLYFWPQMQTKIMNEGWASYWHLRIMREMEINEAEAIEFAKMHAGVVLPSRNSINPYYLGLKMLED
IEKRWDKEYGEGAGREKLFEIREMDNDISFLRNYLTKELVEELDLYLYRKIGHEWKIVEKNWEKVRDHLVYSMTNSGFPV
IMVENGDYEQRGELYLKHAFEDRELDIKYLEKTLVHIFNLWNRPVYIETEIDNKAALFSFDGAKGSRKFL
>Mature_470_residues
MRDQINEELRQLEESIPKIIKIAQDFKLDFYPMRFEICPGEIIYTFGAYGMPTRFTHWSFGKSYHRMKTQYDYNLSRIYE
MVINSDPCYAFLLEGNTIIQNKMVAAHVLAHCDFFKNNIYFSHTNPKDIIESMAVAAERFRQYEMIYGQQKVEAFIDSVL
SIQEHIDPHRMIKRKEHCINKTKNCCGKKQDATYDDLWKLDQPEHSCQCQGDCSKNKQTKLPEQPEKDLLLFIMENARDL
EEWQLDILSTMRDEMLYFWPQMQTKIMNEGWASYWHLRIMREMEINEAEAIEFAKMHAGVVLPSRNSINPYYLGLKMLED
IEKRWDKEYGEGAGREKLFEIREMDNDISFLRNYLTKELVEELDLYLYRKIGHEWKIVEKNWEKVRDHLVYSMTNSGFPV
IMVENGDYEQRGELYLKHAFEDRELDIKYLEKTLVHIFNLWNRPVYIETEIDNKAALFSFDGAKGSRKFL

Specific function: Appears to be involved in spore cortex formation [H]

COG id: COG2719

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli ycgB [H]

Homologues:

Organism=Escherichia coli, GI1787437, Length=477, Percent_Identity=28.9308176100629, Blast_Score=175, Evalue=4e-45,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007390 [H]

Pfam domain/function: PF04293 SpoVR [H]

EC number: NA

Molecular weight: Translated: 56160; Mature: 56160

Theoretical pI: Translated: 5.64; Mature: 5.64

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
6.4 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
6.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRDQINEELRQLEESIPKIIKIAQDFKLDFYPMRFEICPGEIIYTFGAYGMPTRFTHWSF
CCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCEEEECCCCCCCCCCCCCCC
GKSYHRMKTQYDYNLSRIYEMVINSDPCYAFLLEGNTIIQNKMVAAHVLAHCDFFKNNIY
CCHHHHHHHHCCCCHHHHHHHHHCCCCCEEEEEECCEEEHHHHHHHHHHHHHHHHHCCEE
FSHTNPKDIIESMAVAAERFRQYEMIYGQQKVEAFIDSVLSIQEHIDPHRMIKRKEHCIN
EECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
KTKNCCGKKQDATYDDLWKLDQPEHSCQCQGDCSKNKQTKLPEQPEKDLLLFIMENARDL
HHHHHCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHEEEEEHHCCCCH
EEWQLDILSTMRDEMLYFWPQMQTKIMNEGWASYWHLRIMREMEINEAEAIEFAKMHAGV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCE
VLPSRNSINPYYLGLKMLEDIEKRWDKEYGEGAGREKLFEIREMDNDISFLRNYLTKELV
EECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHH
EELDLYLYRKIGHEWKIVEKNWEKVRDHLVYSMTNSGFPVIMVENGDYEQRGELYLKHAF
HHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHEECCCCCEEEEEECCCCCCCCCCCEEECC
EDRELDIKYLEKTLVHIFNLWNRPVYIETEIDNKAALFSFDGAKGSRKFL
CCCCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCEEEEEECCCCCCCCCC
>Mature Secondary Structure
MRDQINEELRQLEESIPKIIKIAQDFKLDFYPMRFEICPGEIIYTFGAYGMPTRFTHWSF
CCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCEEEECCCCCCCCCCCCCCC
GKSYHRMKTQYDYNLSRIYEMVINSDPCYAFLLEGNTIIQNKMVAAHVLAHCDFFKNNIY
CCHHHHHHHHCCCCHHHHHHHHHCCCCCEEEEEECCEEEHHHHHHHHHHHHHHHHHCCEE
FSHTNPKDIIESMAVAAERFRQYEMIYGQQKVEAFIDSVLSIQEHIDPHRMIKRKEHCIN
EECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
KTKNCCGKKQDATYDDLWKLDQPEHSCQCQGDCSKNKQTKLPEQPEKDLLLFIMENARDL
HHHHHCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHEEEEEHHCCCCH
EEWQLDILSTMRDEMLYFWPQMQTKIMNEGWASYWHLRIMREMEINEAEAIEFAKMHAGV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCE
VLPSRNSINPYYLGLKMLEDIEKRWDKEYGEGAGREKLFEIREMDNDISFLRNYLTKELV
EECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHH
EELDLYLYRKIGHEWKIVEKNWEKVRDHLVYSMTNSGFPVIMVENGDYEQRGELYLKHAF
HHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHEECCCCCEEEEEECCCCCCCCCCCEEECC
EDRELDIKYLEKTLVHIFNLWNRPVYIETEIDNKAALFSFDGAKGSRKFL
CCCCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCEEEEEECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8144469; 9579061; 9384377 [H]