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The map label for this gene is smf [H]

Identifier: 134299832

GI number: 134299832

Start: 2180419

End: 2181513

Strand: Reverse

Name: smf [H]

Synonym: Dred_1985

Alternate gene names: 134299832

Gene position: 2181513-2180419 (Counterclockwise)

Preceding gene: 134299833

Following gene: 134299831

Centisome position: 60.46

GC content: 42.56

Gene sequence:

>1095_bases
TTGGATAATCGTTTAGGATGGATAGGGTGGCAGATTCTTCTGCCAGGCAGTGGTCGACGCGTATGGGATATCATTCACCA
TTTTGGATCTCCCGTAGAGGCTTGGCAAGCGTCTGAGAATGATTTACAAGGGGTTCCCTGTGTCGGGGTCCAGGGTGCTA
GGAAACTAGTACAACGCAGAAAGAACATTCAGTTTGATAACTTGGAAAAATATCTTGAAAAAATCAGTTGTAAAGTTCTT
ACAATTGATGATGAAACCTATCCATATTTACTAAAATGTATCCATGATCCGCCGCCGGCCATTTTTGTCAGGGGTCATTT
GCCACAGGATGATTGTATAGGAATAGCAATTATTGGATCCAGAAAACCTTCTCCCTATGGCCTAGTGGTCACCGAAACCC
TGGCAGGAGAACTGGCTAGGGGAGGTATAGAAATTATCAGCGGTATGGCCCGGGGGATAGACAGTGCTTCCCACCGAGCG
GCATTGATGAATAATGGCATGACAATGGCTGTGCTGGGATGCGGGCCAGATATTGTGTATCCTAGAGAAAATGAGAAATT
AATGAAACAAATTATTGAAAAGGGTGCCATTATTACAGAATTTCCGCCGGGTACCATGCCTGAGCCATGGCACTTTCCTA
GTCGAAACCGGATTATCAGCGGATTAAGCAGTGCAGTTGTGGTGATAGAGGCAGCTGAAAAAAGTGGTGCTTTAATAACG
GCAGACTTTGCTTTGGAGCAGGGAAGGGAAGTTATGGCAGTTCCTGGTAATATTAACAACCCCAAAAGTGCCGGAACCAA
TAAGTTAATAAAGCAAGGGGCTAGCTTGGTTACGGGAGCTTTAGACATTTTGAAAGAACTAGGGATAGAGACAAAGGATA
TTAAAAGTCAACAAAAAAAATCGAAGAAGGTAACCTTGGAAGTCAATGAAAAAAAGGTTTTAGCAGTATTATCGGAAATC
CCTCAAACGATGGAGCAAGTTATTAATTTAAGTAAGTTGTTGCCAGAAGAGGTTGCAGCAGCTTTAACGATATTAGAAAT
AGAAGGTTTAATCAGATCCCTTCCTGGAAAAATGTATATTAATGCTGGGTTATAG

Upstream 100 bases:

>100_bases
AAGGTTGATCTCATAAATTTTAGAAAAAAAAGATTGTATGGAAGGAAAATCCAATTACAATCCCGAAAGTGGTAGAAATC
CAGTAACCGGGGTGGGTAAT

Downstream 100 bases:

>100_bases
GGAATTGGTTCTAAATAATAATAAATATTGATACAGTAAAAGTAGTTAGGGGCCAGTAAAGTTAACGAGAATCAGCTCCT
TACAGAGGAGCGTTGAAAAG

Product: DNA protecting protein DprA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 364; Mature: 364

Protein sequence:

>364_residues
MDNRLGWIGWQILLPGSGRRVWDIIHHFGSPVEAWQASENDLQGVPCVGVQGARKLVQRRKNIQFDNLEKYLEKISCKVL
TIDDETYPYLLKCIHDPPPAIFVRGHLPQDDCIGIAIIGSRKPSPYGLVVTETLAGELARGGIEIISGMARGIDSASHRA
ALMNNGMTMAVLGCGPDIVYPRENEKLMKQIIEKGAIITEFPPGTMPEPWHFPSRNRIISGLSSAVVVIEAAEKSGALIT
ADFALEQGREVMAVPGNINNPKSAGTNKLIKQGASLVTGALDILKELGIETKDIKSQQKKSKKVTLEVNEKKVLAVLSEI
PQTMEQVINLSKLLPEEVAAALTILEIEGLIRSLPGKMYINAGL

Sequences:

>Translated_364_residues
MDNRLGWIGWQILLPGSGRRVWDIIHHFGSPVEAWQASENDLQGVPCVGVQGARKLVQRRKNIQFDNLEKYLEKISCKVL
TIDDETYPYLLKCIHDPPPAIFVRGHLPQDDCIGIAIIGSRKPSPYGLVVTETLAGELARGGIEIISGMARGIDSASHRA
ALMNNGMTMAVLGCGPDIVYPRENEKLMKQIIEKGAIITEFPPGTMPEPWHFPSRNRIISGLSSAVVVIEAAEKSGALIT
ADFALEQGREVMAVPGNINNPKSAGTNKLIKQGASLVTGALDILKELGIETKDIKSQQKKSKKVTLEVNEKKVLAVLSEI
PQTMEQVINLSKLLPEEVAAALTILEIEGLIRSLPGKMYINAGL
>Mature_364_residues
MDNRLGWIGWQILLPGSGRRVWDIIHHFGSPVEAWQASENDLQGVPCVGVQGARKLVQRRKNIQFDNLEKYLEKISCKVL
TIDDETYPYLLKCIHDPPPAIFVRGHLPQDDCIGIAIIGSRKPSPYGLVVTETLAGELARGGIEIISGMARGIDSASHRA
ALMNNGMTMAVLGCGPDIVYPRENEKLMKQIIEKGAIITEFPPGTMPEPWHFPSRNRIISGLSSAVVVIEAAEKSGALIT
ADFALEQGREVMAVPGNINNPKSAGTNKLIKQGASLVTGALDILKELGIETKDIKSQQKKSKKVTLEVNEKKVLAVLSEI
PQTMEQVINLSKLLPEEVAAALTILEIEGLIRSLPGKMYINAGL

Specific function: Unknown

COG id: COG0758

COG function: function code LU; Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the smf family [H]

Homologues:

Organism=Escherichia coli, GI48994932, Length=313, Percent_Identity=39.6166134185303, Blast_Score=186, Evalue=3e-48,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003488
- InterPro:   IPR010994 [H]

Pfam domain/function: PF02481 DNA_processg_A [H]

EC number: NA

Molecular weight: Translated: 39662; Mature: 39662

Theoretical pI: Translated: 7.50; Mature: 7.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDNRLGWIGWQILLPGSGRRVWDIIHHFGSPVEAWQASENDLQGVPCVGVQGARKLVQRR
CCCCEEEEEEEEEECCCCCHHHHHHHHHCCCHHHHCCCCCCCCCCCCCCHHHHHHHHHHH
KNIQFDNLEKYLEKISCKVLTIDDETYPYLLKCIHDPPPAIFVRGHLPQDDCIGIAIIGS
HCCCHHHHHHHHHHHCEEEEEECCCCHHHHHHHHCCCCCEEEEECCCCCCCCEEEEEEEC
RKPSPYGLVVTETLAGELARGGIEIISGMARGIDSASHRAALMNNGMTMAVLGCGPDIVY
CCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCEEEEEECCCCEEC
PRENEKLMKQIIEKGAIITEFPPGTMPEPWHFPSRNRIISGLSSAVVVIEAAEKSGALIT
CCCCHHHHHHHHHCCCEEEECCCCCCCCCCCCCCHHHHHHCCCCEEEEEEECCCCCCEEE
ADFALEQGREVMAVPGNINNPKSAGTNKLIKQGASLVTGALDILKELGIETKDIKSQQKK
EEHHHHCCCEEEECCCCCCCCCCCCHHHHHHCCHHHHHHHHHHHHHHCCCHHHHHHHHHH
SKKVTLEVNEKKVLAVLSEIPQTMEQVINLSKLLPEEVAAALTILEIEGLIRSLPGKMYI
CCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCCCEEE
NAGL
ECCC
>Mature Secondary Structure
MDNRLGWIGWQILLPGSGRRVWDIIHHFGSPVEAWQASENDLQGVPCVGVQGARKLVQRR
CCCCEEEEEEEEEECCCCCHHHHHHHHHCCCHHHHCCCCCCCCCCCCCCHHHHHHHHHHH
KNIQFDNLEKYLEKISCKVLTIDDETYPYLLKCIHDPPPAIFVRGHLPQDDCIGIAIIGS
HCCCHHHHHHHHHHHCEEEEEECCCCHHHHHHHHCCCCCEEEEECCCCCCCCEEEEEEEC
RKPSPYGLVVTETLAGELARGGIEIISGMARGIDSASHRAALMNNGMTMAVLGCGPDIVY
CCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCEEEEEECCCCEEC
PRENEKLMKQIIEKGAIITEFPPGTMPEPWHFPSRNRIISGLSSAVVVIEAAEKSGALIT
CCCCHHHHHHHHHCCCEEEECCCCCCCCCCCCCCHHHHHHCCCCEEEEEEECCCCCCEEE
ADFALEQGREVMAVPGNINNPKSAGTNKLIKQGASLVTGALDILKELGIETKDIKSQQKK
EEHHHHCCCEEEECCCCCCCCCCCCHHHHHHCCHHHHHHHHHHHHHHCCCHHHHHHHHHH
SKKVTLEVNEKKVLAVLSEIPQTMEQVINLSKLLPEEVAAALTILEIEGLIRSLPGKMYI
CCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCCCEEE
NAGL
ECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]