| Definition | Desulfotomaculum reducens MI-1 chromosome, complete genome. |
|---|---|
| Accession | NC_009253 |
| Length | 3,608,104 |
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The map label for this gene is cdsA [H]
Identifier: 134299819
GI number: 134299819
Start: 2167895
End: 2168680
Strand: Reverse
Name: cdsA [H]
Synonym: Dred_1972
Alternate gene names: 134299819
Gene position: 2168680-2167895 (Counterclockwise)
Preceding gene: 134299820
Following gene: 134299818
Centisome position: 60.11
GC content: 40.46
Gene sequence:
>786_bases TTGTTGCACCTGCGAGTGCTAAGCGCAGTCATAGGAATACCAGTAATAGTTTTAGCAGCTTGGTTTGGTGATTGGGTACT GTGGTTACTTGCTCTTTCTGTTTTTACAATGGCTGGTTTTGAGATATCGGATATTCTCAAGGGACTAAAGCTTAATCCTT CCAAATGGATGATACAAATTGGTGGTTTATTTATTTTCACCAGTGCATATCTATATAAAGATGAATACCTAGGACTGATG TATGTCTTTTTGGTAATAGTCAGTTTAATAATGATGGCCTTCTTATATCCTCGTGTATACCCTGTTGATGTGTTCGGTAA TTTAGTTGCAGTTTTGTATTTAGGCAATTTAATTTTCTTTTATTTGACACGTGAATTGGAAAACGGCTTTATGTGGCTTC TATTGTTATTGGCAGCCACTTGGATCAGTGATACATTTGCCTATTTTGTAGGACGTTCTTTGGGTAGACATAAACTTGCA CCGGTACTAAGCCCCAAAAAGACCGTTGAGGGGGCAATTGGAGGGGTTTTGGGTTCCGCCCTAACAGCCTATATCTTTGG TATCTATCAGCAAGGGGGTTCAGTGGGGATAGTGGTTGTCCTTGGCGTTCTTATTGGTATAGCTGCTTTACTTGGAGATT TAGTGGAATCAGCCCTGAAAAGACAGGCTGGCATAAAGGACTCTGGGCAGATTATACCAGGCCATGGCGGGTTCATGGAT CGCTTTGATAGTTTGCTGTTTACGGCACCCTTGGTATACTATGTTGTTAGTTTGTTTATAATTTAA
Upstream 100 bases:
>100_bases CCGGATTTTCAACGTTACCATTTATTACAAGCTATCATTGGGTTTCAACGTCGGGAACGGCGATTTGGTGGACTAAACAA AAAGTAGGTTGGTGGACAAA
Downstream 100 bases:
>100_bases TTATAATATCATAGAGGTGAAACGTATTGCCTGCTTGGCTAAAGACCGCCCTGAATTTAGTTTTGGCCGGTCTGCTTCTT TTAGTGGCGTTCTTTATTAT
Product: phosphatidate cytidylyltransferase
Products: NA
Alternate protein names: CDP-DAG synthase; CDP-DG synthase; CDP-diacylglycerol synthase; CDS; CDP-diglyceride pyrophosphorylase; CDP-diglyceride synthase; CTP:phosphatidate cytidylyltransferase [H]
Number of amino acids: Translated: 261; Mature: 261
Protein sequence:
>261_residues MLHLRVLSAVIGIPVIVLAAWFGDWVLWLLALSVFTMAGFEISDILKGLKLNPSKWMIQIGGLFIFTSAYLYKDEYLGLM YVFLVIVSLIMMAFLYPRVYPVDVFGNLVAVLYLGNLIFFYLTRELENGFMWLLLLLAATWISDTFAYFVGRSLGRHKLA PVLSPKKTVEGAIGGVLGSALTAYIFGIYQQGGSVGIVVVLGVLIGIAALLGDLVESALKRQAGIKDSGQIIPGHGGFMD RFDSLLFTAPLVYYVVSLFII
Sequences:
>Translated_261_residues MLHLRVLSAVIGIPVIVLAAWFGDWVLWLLALSVFTMAGFEISDILKGLKLNPSKWMIQIGGLFIFTSAYLYKDEYLGLM YVFLVIVSLIMMAFLYPRVYPVDVFGNLVAVLYLGNLIFFYLTRELENGFMWLLLLLAATWISDTFAYFVGRSLGRHKLA PVLSPKKTVEGAIGGVLGSALTAYIFGIYQQGGSVGIVVVLGVLIGIAALLGDLVESALKRQAGIKDSGQIIPGHGGFMD RFDSLLFTAPLVYYVVSLFII >Mature_261_residues MLHLRVLSAVIGIPVIVLAAWFGDWVLWLLALSVFTMAGFEISDILKGLKLNPSKWMIQIGGLFIFTSAYLYKDEYLGLM YVFLVIVSLIMMAFLYPRVYPVDVFGNLVAVLYLGNLIFFYLTRELENGFMWLLLLLAATWISDTFAYFVGRSLGRHKLA PVLSPKKTVEGAIGGVLGSALTAYIFGIYQQGGSVGIVVVLGVLIGIAALLGDLVESALKRQAGIKDSGQIIPGHGGFMD RFDSLLFTAPLVYYVVSLFII
Specific function: Phospholipid biosynthesis. [C]
COG id: COG0575
COG function: function code I; CDP-diglyceride synthetase
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CDS family [H]
Homologues:
Organism=Escherichia coli, GI87081696, Length=152, Percent_Identity=38.8157894736842, Blast_Score=110, Evalue=7e-26, Organism=Escherichia coli, GI1787677, Length=134, Percent_Identity=43.2835820895522, Blast_Score=108, Evalue=5e-25,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000374 [H]
Pfam domain/function: PF01148 CTP_transf_1 [H]
EC number: =2.7.7.41 [H]
Molecular weight: Translated: 28691; Mature: 28691
Theoretical pI: Translated: 8.64; Mature: 8.64
Prosite motif: PS01315 CDS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLHLRVLSAVIGIPVIVLAAWFGDWVLWLLALSVFTMAGFEISDILKGLKLNPSKWMIQI CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCHHHHHHH GGLFIFTSAYLYKDEYLGLMYVFLVIVSLIMMAFLYPRVYPVDVFGNLVAVLYLGNLIFF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH YLTRELENGFMWLLLLLAATWISDTFAYFVGRSLGRHKLAPVLSPKKTVEGAIGGVLGSA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCCCHHHHHHHHHHHHHHH LTAYIFGIYQQGGSVGIVVVLGVLIGIAALLGDLVESALKRQAGIKDSGQIIPGHGGFMD HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEECCCCCHHH RFDSLLFTAPLVYYVVSLFII HHHHHHHHHHHHHHHHHHHHC >Mature Secondary Structure MLHLRVLSAVIGIPVIVLAAWFGDWVLWLLALSVFTMAGFEISDILKGLKLNPSKWMIQI CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCHHHHHHH GGLFIFTSAYLYKDEYLGLMYVFLVIVSLIMMAFLYPRVYPVDVFGNLVAVLYLGNLIFF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH YLTRELENGFMWLLLLLAATWISDTFAYFVGRSLGRHKLAPVLSPKKTVEGAIGGVLGSA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCCCHHHHHHHHHHHHHHH LTAYIFGIYQQGGSVGIVVVLGVLIGIAALLGDLVESALKRQAGIKDSGQIIPGHGGFMD HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEECCCCCHHH RFDSLLFTAPLVYYVVSLFII HHHHHHHHHHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA