| Definition | Desulfotomaculum reducens MI-1 chromosome, complete genome. |
|---|---|
| Accession | NC_009253 |
| Length | 3,608,104 |
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The map label for this gene is ytvI [H]
Identifier: 134299818
GI number: 134299818
Start: 2166780
End: 2167868
Strand: Reverse
Name: ytvI [H]
Synonym: Dred_1971
Alternate gene names: 134299818
Gene position: 2167868-2166780 (Counterclockwise)
Preceding gene: 134299819
Following gene: 134299817
Centisome position: 60.08
GC content: 37.65
Gene sequence:
>1089_bases TTGCCTGCTTGGCTAAAGACCGCCCTGAATTTAGTTTTGGCCGGTCTGCTTCTTTTAGTGGCGTTCTTTATTATTGATAA GTTATCCGTTTACTTTGTTAAAGGGGTCTCATTTATAATACCTCTCATTGTCCCCTTTGTTCTGGCAATTTTTATTAGCT TTTTGCTGGAGCCTATGGTGTATATTCTGCAAAATAAAATACATTTTTCCAGGGGACCAGCAGTTGCCCTTTCTATGTTT TTGCTTATTATATTTTTTGTTACAATTATTTCATTGTTGCTGTTAAGATTGATTACTGAACTTATAAACCTATCTAAAAG TATTCCTTTTATTATTCAAGAGATTCAGTATTGGGTCGAAAAGTCCCTACCAAAGCTCCAGCAACTATATGGGGAACTAC CTCCAAGTGTCTCAAATTATATTCAAGAATCCTTTAGGTCCATAGCGGATACATTGCAGAATCTTTTAGCAGCTGCACTG GATACGTTGTATAGTACCTTCTCTGCTGTTCCAGGTTTTATAACCATCATTATAGTGAGTTTTTTGGCAACCTATTTTAT TAGTAAAGACAGAAGGTCATTGGCATTACATTGGATTAAATTTCTTCCTGCACCCTATGGGGAACGAAGTCTACATGTTA TTAAAGAAGTGTTCAATGCTTTTATCTCCTACATTAAGGCCCAGGGGATTCTCGTTAGCATTAGCACTTTTATTAGCATA TCAGGTTTATACATAATAGGGGCAGATTATGCCCTAACAATGGGTCTTTTGATTGGCTTTTTTGATATTATTCCTGTTTT GGGGCCCGGGACGGTAATACTCCCTTGGATAGTGTGGTCCATAATCTCTGGGGAAATAGCTTTTGGCCTAAAATTATTGG TCTTATATATTGTTATTCTTGTGGCAAGGCAACTGTTGGAAACGAAGGTTGTGGCGGATAACCTTGGATTACATCCCTTA GCGACTCTGGTGGCATTGTTTTTTGGGTTTAGAATATTAGGCTTTGTAGGAATGATCGTTGGCCCAATTTTGTTAATTGC CATCCAAGCAATAGTAAAAGCAGGAATTCAAAGCCCAAGGGTGAAATAA
Upstream 100 bases:
>100_bases TCATGGATCGCTTTGATAGTTTGCTGTTTACGGCACCCTTGGTATACTATGTTGTTAGTTTGTTTATAATTTAATTATAA TATCATAGAGGTGAAACGTA
Downstream 100 bases:
>100_bases GATTAACTGAGGTGCCAAATGATGAAACAGATATCTATTTTAGGAAGTACCGGCTCGATTGGCAGGCAGACCCTGGAAGT TGTAAATAGTTTCCCGGAAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 362; Mature: 361
Protein sequence:
>362_residues MPAWLKTALNLVLAGLLLLVAFFIIDKLSVYFVKGVSFIIPLIVPFVLAIFISFLLEPMVYILQNKIHFSRGPAVALSMF LLIIFFVTIISLLLLRLITELINLSKSIPFIIQEIQYWVEKSLPKLQQLYGELPPSVSNYIQESFRSIADTLQNLLAAAL DTLYSTFSAVPGFITIIIVSFLATYFISKDRRSLALHWIKFLPAPYGERSLHVIKEVFNAFISYIKAQGILVSISTFISI SGLYIIGADYALTMGLLIGFFDIIPVLGPGTVILPWIVWSIISGEIAFGLKLLVLYIVILVARQLLETKVVADNLGLHPL ATLVALFFGFRILGFVGMIVGPILLIAIQAIVKAGIQSPRVK
Sequences:
>Translated_362_residues MPAWLKTALNLVLAGLLLLVAFFIIDKLSVYFVKGVSFIIPLIVPFVLAIFISFLLEPMVYILQNKIHFSRGPAVALSMF LLIIFFVTIISLLLLRLITELINLSKSIPFIIQEIQYWVEKSLPKLQQLYGELPPSVSNYIQESFRSIADTLQNLLAAAL DTLYSTFSAVPGFITIIIVSFLATYFISKDRRSLALHWIKFLPAPYGERSLHVIKEVFNAFISYIKAQGILVSISTFISI SGLYIIGADYALTMGLLIGFFDIIPVLGPGTVILPWIVWSIISGEIAFGLKLLVLYIVILVARQLLETKVVADNLGLHPL ATLVALFFGFRILGFVGMIVGPILLIAIQAIVKAGIQSPRVK >Mature_361_residues PAWLKTALNLVLAGLLLLVAFFIIDKLSVYFVKGVSFIIPLIVPFVLAIFISFLLEPMVYILQNKIHFSRGPAVALSMFL LIIFFVTIISLLLLRLITELINLSKSIPFIIQEIQYWVEKSLPKLQQLYGELPPSVSNYIQESFRSIADTLQNLLAAALD TLYSTFSAVPGFITIIIVSFLATYFISKDRRSLALHWIKFLPAPYGERSLHVIKEVFNAFISYIKAQGILVSISTFISIS GLYIIGADYALTMGLLIGFFDIIPVLGPGTVILPWIVWSIISGEIAFGLKLLVLYIVILVARQLLETKVVADNLGLHPLA TLVALFFGFRILGFVGMIVGPILLIAIQAIVKAGIQSPRVK
Specific function: Unknown
COG id: COG0628
COG function: function code R; Predicted permease
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0118 (perM) family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014227 - InterPro: IPR002549 [H]
Pfam domain/function: PF01594 UPF0118 [H]
EC number: NA
Molecular weight: Translated: 40158; Mature: 40027
Theoretical pI: Translated: 9.87; Mature: 9.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPAWLKTALNLVLAGLLLLVAFFIIDKLSVYFVKGVSFIIPLIVPFVLAIFISFLLEPMV CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YILQNKIHFSRGPAVALSMFLLIIFFVTIISLLLLRLITELINLSKSIPFIIQEIQYWVE HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH KSLPKLQQLYGELPPSVSNYIQESFRSIADTLQNLLAAALDTLYSTFSAVPGFITIIIVS HCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FLATYFISKDRRSLALHWIKFLPAPYGERSLHVIKEVFNAFISYIKAQGILVSISTFISI HHHHHHHHCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH SGLYIIGADYALTMGLLIGFFDIIPVLGPGTVILPWIVWSIISGEIAFGLKLLVLYIVIL HHHHEECCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VARQLLETKVVADNLGLHPLATLVALFFGFRILGFVGMIVGPILLIAIQAIVKAGIQSPR HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC VK CC >Mature Secondary Structure PAWLKTALNLVLAGLLLLVAFFIIDKLSVYFVKGVSFIIPLIVPFVLAIFISFLLEPMV CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YILQNKIHFSRGPAVALSMFLLIIFFVTIISLLLLRLITELINLSKSIPFIIQEIQYWVE HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH KSLPKLQQLYGELPPSVSNYIQESFRSIADTLQNLLAAALDTLYSTFSAVPGFITIIIVS HCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FLATYFISKDRRSLALHWIKFLPAPYGERSLHVIKEVFNAFISYIKAQGILVSISTFISI HHHHHHHHCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH SGLYIIGADYALTMGLLIGFFDIIPVLGPGTVILPWIVWSIISGEIAFGLKLLVLYIVIL HHHHEECCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VARQLLETKVVADNLGLHPLATLVALFFGFRILGFVGMIVGPILLIAIQAIVKAGIQSPR HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC VK CC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9387221; 9384377 [H]