Definition Desulfotomaculum reducens MI-1 chromosome, complete genome.
Accession NC_009253
Length 3,608,104

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The map label for this gene is ytvI [H]

Identifier: 134299818

GI number: 134299818

Start: 2166780

End: 2167868

Strand: Reverse

Name: ytvI [H]

Synonym: Dred_1971

Alternate gene names: 134299818

Gene position: 2167868-2166780 (Counterclockwise)

Preceding gene: 134299819

Following gene: 134299817

Centisome position: 60.08

GC content: 37.65

Gene sequence:

>1089_bases
TTGCCTGCTTGGCTAAAGACCGCCCTGAATTTAGTTTTGGCCGGTCTGCTTCTTTTAGTGGCGTTCTTTATTATTGATAA
GTTATCCGTTTACTTTGTTAAAGGGGTCTCATTTATAATACCTCTCATTGTCCCCTTTGTTCTGGCAATTTTTATTAGCT
TTTTGCTGGAGCCTATGGTGTATATTCTGCAAAATAAAATACATTTTTCCAGGGGACCAGCAGTTGCCCTTTCTATGTTT
TTGCTTATTATATTTTTTGTTACAATTATTTCATTGTTGCTGTTAAGATTGATTACTGAACTTATAAACCTATCTAAAAG
TATTCCTTTTATTATTCAAGAGATTCAGTATTGGGTCGAAAAGTCCCTACCAAAGCTCCAGCAACTATATGGGGAACTAC
CTCCAAGTGTCTCAAATTATATTCAAGAATCCTTTAGGTCCATAGCGGATACATTGCAGAATCTTTTAGCAGCTGCACTG
GATACGTTGTATAGTACCTTCTCTGCTGTTCCAGGTTTTATAACCATCATTATAGTGAGTTTTTTGGCAACCTATTTTAT
TAGTAAAGACAGAAGGTCATTGGCATTACATTGGATTAAATTTCTTCCTGCACCCTATGGGGAACGAAGTCTACATGTTA
TTAAAGAAGTGTTCAATGCTTTTATCTCCTACATTAAGGCCCAGGGGATTCTCGTTAGCATTAGCACTTTTATTAGCATA
TCAGGTTTATACATAATAGGGGCAGATTATGCCCTAACAATGGGTCTTTTGATTGGCTTTTTTGATATTATTCCTGTTTT
GGGGCCCGGGACGGTAATACTCCCTTGGATAGTGTGGTCCATAATCTCTGGGGAAATAGCTTTTGGCCTAAAATTATTGG
TCTTATATATTGTTATTCTTGTGGCAAGGCAACTGTTGGAAACGAAGGTTGTGGCGGATAACCTTGGATTACATCCCTTA
GCGACTCTGGTGGCATTGTTTTTTGGGTTTAGAATATTAGGCTTTGTAGGAATGATCGTTGGCCCAATTTTGTTAATTGC
CATCCAAGCAATAGTAAAAGCAGGAATTCAAAGCCCAAGGGTGAAATAA

Upstream 100 bases:

>100_bases
TCATGGATCGCTTTGATAGTTTGCTGTTTACGGCACCCTTGGTATACTATGTTGTTAGTTTGTTTATAATTTAATTATAA
TATCATAGAGGTGAAACGTA

Downstream 100 bases:

>100_bases
GATTAACTGAGGTGCCAAATGATGAAACAGATATCTATTTTAGGAAGTACCGGCTCGATTGGCAGGCAGACCCTGGAAGT
TGTAAATAGTTTCCCGGAAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 362; Mature: 361

Protein sequence:

>362_residues
MPAWLKTALNLVLAGLLLLVAFFIIDKLSVYFVKGVSFIIPLIVPFVLAIFISFLLEPMVYILQNKIHFSRGPAVALSMF
LLIIFFVTIISLLLLRLITELINLSKSIPFIIQEIQYWVEKSLPKLQQLYGELPPSVSNYIQESFRSIADTLQNLLAAAL
DTLYSTFSAVPGFITIIIVSFLATYFISKDRRSLALHWIKFLPAPYGERSLHVIKEVFNAFISYIKAQGILVSISTFISI
SGLYIIGADYALTMGLLIGFFDIIPVLGPGTVILPWIVWSIISGEIAFGLKLLVLYIVILVARQLLETKVVADNLGLHPL
ATLVALFFGFRILGFVGMIVGPILLIAIQAIVKAGIQSPRVK

Sequences:

>Translated_362_residues
MPAWLKTALNLVLAGLLLLVAFFIIDKLSVYFVKGVSFIIPLIVPFVLAIFISFLLEPMVYILQNKIHFSRGPAVALSMF
LLIIFFVTIISLLLLRLITELINLSKSIPFIIQEIQYWVEKSLPKLQQLYGELPPSVSNYIQESFRSIADTLQNLLAAAL
DTLYSTFSAVPGFITIIIVSFLATYFISKDRRSLALHWIKFLPAPYGERSLHVIKEVFNAFISYIKAQGILVSISTFISI
SGLYIIGADYALTMGLLIGFFDIIPVLGPGTVILPWIVWSIISGEIAFGLKLLVLYIVILVARQLLETKVVADNLGLHPL
ATLVALFFGFRILGFVGMIVGPILLIAIQAIVKAGIQSPRVK
>Mature_361_residues
PAWLKTALNLVLAGLLLLVAFFIIDKLSVYFVKGVSFIIPLIVPFVLAIFISFLLEPMVYILQNKIHFSRGPAVALSMFL
LIIFFVTIISLLLLRLITELINLSKSIPFIIQEIQYWVEKSLPKLQQLYGELPPSVSNYIQESFRSIADTLQNLLAAALD
TLYSTFSAVPGFITIIIVSFLATYFISKDRRSLALHWIKFLPAPYGERSLHVIKEVFNAFISYIKAQGILVSISTFISIS
GLYIIGADYALTMGLLIGFFDIIPVLGPGTVILPWIVWSIISGEIAFGLKLLVLYIVILVARQLLETKVVADNLGLHPLA
TLVALFFGFRILGFVGMIVGPILLIAIQAIVKAGIQSPRVK

Specific function: Unknown

COG id: COG0628

COG function: function code R; Predicted permease

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0118 (perM) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014227
- InterPro:   IPR002549 [H]

Pfam domain/function: PF01594 UPF0118 [H]

EC number: NA

Molecular weight: Translated: 40158; Mature: 40027

Theoretical pI: Translated: 9.87; Mature: 9.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPAWLKTALNLVLAGLLLLVAFFIIDKLSVYFVKGVSFIIPLIVPFVLAIFISFLLEPMV
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YILQNKIHFSRGPAVALSMFLLIIFFVTIISLLLLRLITELINLSKSIPFIIQEIQYWVE
HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
KSLPKLQQLYGELPPSVSNYIQESFRSIADTLQNLLAAALDTLYSTFSAVPGFITIIIVS
HCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FLATYFISKDRRSLALHWIKFLPAPYGERSLHVIKEVFNAFISYIKAQGILVSISTFISI
HHHHHHHHCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
SGLYIIGADYALTMGLLIGFFDIIPVLGPGTVILPWIVWSIISGEIAFGLKLLVLYIVIL
HHHHEECCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VARQLLETKVVADNLGLHPLATLVALFFGFRILGFVGMIVGPILLIAIQAIVKAGIQSPR
HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
VK
CC
>Mature Secondary Structure 
PAWLKTALNLVLAGLLLLVAFFIIDKLSVYFVKGVSFIIPLIVPFVLAIFISFLLEPMV
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YILQNKIHFSRGPAVALSMFLLIIFFVTIISLLLLRLITELINLSKSIPFIIQEIQYWVE
HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
KSLPKLQQLYGELPPSVSNYIQESFRSIADTLQNLLAAALDTLYSTFSAVPGFITIIIVS
HCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FLATYFISKDRRSLALHWIKFLPAPYGERSLHVIKEVFNAFISYIKAQGILVSISTFISI
HHHHHHHHCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
SGLYIIGADYALTMGLLIGFFDIIPVLGPGTVILPWIVWSIISGEIAFGLKLLVLYIVIL
HHHHEECCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VARQLLETKVVADNLGLHPLATLVALFFGFRILGFVGMIVGPILLIAIQAIVKAGIQSPR
HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
VK
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9387221; 9384377 [H]