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The map label for this gene is ylxY [H]

Identifier: 134299796

GI number: 134299796

Start: 2138499

End: 2139248

Strand: Reverse

Name: ylxY [H]

Synonym: Dred_1948

Alternate gene names: 134299796

Gene position: 2139248-2138499 (Counterclockwise)

Preceding gene: 134299797

Following gene: 134299795

Centisome position: 59.29

GC content: 39.47

Gene sequence:

>750_bases
ATGCGAATATTATTTATTCGAAGGGGCTGGTTATATAAGACGGTTCTTTGGCTACTGATTGTCCTCTTTTTAATTGGTTT
AGGTGTTTTAGCTACCAATGAAAAACATGAAAGGGTTTTTGCACCTATATATCAAGGCAGTGATAAGGAAAAGAAAATAG
CTTTAGCCTGTAATGTTTTTTGGGGAGAAGAATACATACCTAAAATGCTAGAGATTTTTGAGGATGAAAACATTAAAATT
ACCTTCTTTGCCGGTGGCACCTGGGTGGAAGACTTTCCTGAGTTACTTAAGAAAATGGATGGTGCAGGGCATGAAATTGG
CTCCCATGGTTATTCACATCCTCATCCAGATCGCCTGAGTAAAAATGGCAATATAAGTGATATGCAAAGGGCAGAGAAAC
TGATCTATGATGCAATTCATAAAAGACCAAAGCTATATGCACCCCCCTATGGAGAAAAGGGTCCAGCAGTATTAAAGGCC
GCCCAGGAACAGGGATATTCCTTTATACTCTGGAGTATCGACACCATTGACTGGCAGAGGCCGGCTCCGGCAATAATTAA
ACAAAGGGTGGTTAGTAAGGCCCATAACGGAGCAATTGTGTTAATGCATCCAACAGACCCCACAGTTAAAGCACTTCCCG
AAATGATCAAACAATTGAAAAGTGAAGGCTTTGAATTTGTTAAAGTGGGAGAGATTATTGAAGGTATTCCGCAAAATGTT
GAATCTGAAAAAAGAAAGACATATAAATAG

Upstream 100 bases:

>100_bases
TATAAAGCCCCTCATTTTGAGGGGTTTTATATTTGTTCAGAAATAATCCTGCATCTAGAGGCATACAGTTTGAAGAAGAG
GAAAACTTAGGGGGGAGAAT

Downstream 100 bases:

>100_bases
TCATAGGCTAGCTTAAAAGGGGGATACTTACATTGATACTCCATAATTGTCTATAATCTTAAATATAAAAAGGGTTTTTT
GTAAATCATGGAGAAGGTTC

Product: polysaccharide deacetylase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 249; Mature: 249

Protein sequence:

>249_residues
MRILFIRRGWLYKTVLWLLIVLFLIGLGVLATNEKHERVFAPIYQGSDKEKKIALACNVFWGEEYIPKMLEIFEDENIKI
TFFAGGTWVEDFPELLKKMDGAGHEIGSHGYSHPHPDRLSKNGNISDMQRAEKLIYDAIHKRPKLYAPPYGEKGPAVLKA
AQEQGYSFILWSIDTIDWQRPAPAIIKQRVVSKAHNGAIVLMHPTDPTVKALPEMIKQLKSEGFEFVKVGEIIEGIPQNV
ESEKRKTYK

Sequences:

>Translated_249_residues
MRILFIRRGWLYKTVLWLLIVLFLIGLGVLATNEKHERVFAPIYQGSDKEKKIALACNVFWGEEYIPKMLEIFEDENIKI
TFFAGGTWVEDFPELLKKMDGAGHEIGSHGYSHPHPDRLSKNGNISDMQRAEKLIYDAIHKRPKLYAPPYGEKGPAVLKA
AQEQGYSFILWSIDTIDWQRPAPAIIKQRVVSKAHNGAIVLMHPTDPTVKALPEMIKQLKSEGFEFVKVGEIIEGIPQNV
ESEKRKTYK
>Mature_249_residues
MRILFIRRGWLYKTVLWLLIVLFLIGLGVLATNEKHERVFAPIYQGSDKEKKIALACNVFWGEEYIPKMLEIFEDENIKI
TFFAGGTWVEDFPELLKKMDGAGHEIGSHGYSHPHPDRLSKNGNISDMQRAEKLIYDAIHKRPKLYAPPYGEKGPAVLKA
AQEQGYSFILWSIDTIDWQRPAPAIIKQRVVSKAHNGAIVLMHPTDPTVKALPEMIKQLKSEGFEFVKVGEIIEGIPQNV
ESEKRKTYK

Specific function: Unknown

COG id: COG0726

COG function: function code G; Predicted xylanase/chitin deacetylase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the polysaccharide deacetylase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011330
- InterPro:   IPR002509
- InterPro:   IPR014228
- InterPro:   IPR010916 [H]

Pfam domain/function: PF01522 Polysacc_deac_1 [H]

EC number: NA

Molecular weight: Translated: 28443; Mature: 28443

Theoretical pI: Translated: 9.15; Mature: 9.15

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRILFIRRGWLYKTVLWLLIVLFLIGLGVLATNEKHERVFAPIYQGSDKEKKIALACNVF
CEEEEEECCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHEEEHHHCCCCCCCEEEEEEEEE
WGEEYIPKMLEIFEDENIKITFFAGGTWVEDFPELLKKMDGAGHEIGSHGYSHPHPDRLS
CCHHHHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHC
KNGNISDMQRAEKLIYDAIHKRPKLYAPPYGEKGPAVLKAAQEQGYSFILWSIDTIDWQR
CCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHCCCEEEEEEECCCCCCC
PAPAIIKQRVVSKAHNGAIVLMHPTDPTVKALPEMIKQLKSEGFEFVKVGEIIEGIPQNV
CCHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCEEHHHHHHHHCCCCH
ESEKRKTYK
HHHHHHCCC
>Mature Secondary Structure
MRILFIRRGWLYKTVLWLLIVLFLIGLGVLATNEKHERVFAPIYQGSDKEKKIALACNVF
CEEEEEECCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHEEEHHHCCCCCCCEEEEEEEEE
WGEEYIPKMLEIFEDENIKITFFAGGTWVEDFPELLKKMDGAGHEIGSHGYSHPHPDRLS
CCHHHHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHC
KNGNISDMQRAEKLIYDAIHKRPKLYAPPYGEKGPAVLKAAQEQGYSFILWSIDTIDWQR
CCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHCCCEEEEEEECCCCCCC
PAPAIIKQRVVSKAHNGAIVLMHPTDPTVKALPEMIKQLKSEGFEFVKVGEIIEGIPQNV
CCHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCEEHHHHHHHHCCCCH
ESEKRKTYK
HHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377; 8825779 [H]