| Definition | Desulfotomaculum reducens MI-1 chromosome, complete genome. |
|---|---|
| Accession | NC_009253 |
| Length | 3,608,104 |
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The map label for this gene is dapG [H]
Identifier: 134299788
GI number: 134299788
Start: 2131440
End: 2132666
Strand: Reverse
Name: dapG [H]
Synonym: Dred_1940
Alternate gene names: 134299788
Gene position: 2132666-2131440 (Counterclockwise)
Preceding gene: 134299789
Following gene: 134299787
Centisome position: 59.11
GC content: 43.11
Gene sequence:
>1227_bases ATGCGTTTTATTATCCAAAAATTTGGTGGAACTTCTCTGGTTACCCAGGAACTTAGGGAGCTAGTAGCAAACAAAATTAT TGCTGCTGTAGATGAGGGGTTTTCACCGGTTGTTGTGGTATCTGCCATTGGTCGAGCGGGTGAACCCTATGCCACAGATA CGTTACTCAATTTTGCATTATCCATAAACCGTGACATTCCACCCAGAGAAATGGATATGTTAATGTCCTGTGGTGAGATT ATATCTGGGGTAGCAATGGCTAATACACTCCAGCGCATGGGACATCAGGCAGTTTTATTAACAGGGGCTCAAGCGGGTAT CATAACAGATGATAATTTCAATGATGCACGGATTATTCGAGTTGAGCCTCAAAATGTTATTAAGCATGTGGAACAAGGGA AAATTGTTATAGTAACAGGGTTTCAAGGCATCTGTCAAGGTGGCGACATAACGACCCTAGGCCGCGGTGGCAGTGATACC ACAGCATCTGCATTGGGAGTAGCCCTCAATGCAGAGTATATTGATATCTATACAGATGTGGAAGGTATTATGACAGCGGA CCCCCGGATTGTGGAGGACGCAAGGATTTTAGATTCAGTAACTTATAATGAAATATGCCAGCTGGCCCATGAAGGAGCAA AGGTTATTCACCCTAGGGCAGTGGAAATAGCAATGCAAAAAAATATCCCTCTTCGTGTTCGATCTACCTTTTTGGATTCC CCAGGAACCCTGGTGACCAGTCATCATGGAGTTTATGGAACCATAGATATTACAAGGGATCGATTGGCATGTGGTGTTAC CCATATTGCAGGGGTTACACAGTTAAAAATAATTGCCAAGGATATTGCAGTGGAAGATCCAGCATTGCGAATATTCCGGG CACTGGCCTTAGCAGATATCAGTATAGATTTTATTAATGTCAGTCCAGAGTTAATAATGTTAACAGTGAAGGATGAAGTT GCAAAGAAGGCTGTTGATGTATTGGAAAATCTAAGTGTTTTTCCGCAAGTGAAACCAAATTGTGCCAAAGTATCTACGGT TGGCGCAGGGATGACGGGGGTTCCTGGTGTTATGGCCAGCATTATTCAGGCATTGACAGAAGAAGGGGTTGAAATACTGC AGTCCTCCGACTCCCATACAACAATCTGGGTCTTAGTTGAAAAGGAAAACATGAAGAAAGCCATACGTGCCTTGCATCGA AAGTTTAAGTTAGGTCAAAGGGAATAA
Upstream 100 bases:
>100_bases GGGTGGTGGGTGACCAGATTCGCAAGGGTGCGGCCACCAACGCCGTTCAAATTGCTGAATTAGTGCTAAAATATGACAGC TTAATGAAGAAGGAGTAAAT
Downstream 100 bases:
>100_bases GGTTATTGAGGGGATGTGAAAGTCAATGTCAACAGTGGATTTTGGCAGGGTTATTACGGCCATGGTGACACCTTTTCATC CAGATATGTCCGTGAATTAT
Product: aspartate kinase I
Products: NA
Alternate protein names: Aspartate kinase 1; Aspartokinase I [H]
Number of amino acids: Translated: 408; Mature: 408
Protein sequence:
>408_residues MRFIIQKFGGTSLVTQELRELVANKIIAAVDEGFSPVVVVSAIGRAGEPYATDTLLNFALSINRDIPPREMDMLMSCGEI ISGVAMANTLQRMGHQAVLLTGAQAGIITDDNFNDARIIRVEPQNVIKHVEQGKIVIVTGFQGICQGGDITTLGRGGSDT TASALGVALNAEYIDIYTDVEGIMTADPRIVEDARILDSVTYNEICQLAHEGAKVIHPRAVEIAMQKNIPLRVRSTFLDS PGTLVTSHHGVYGTIDITRDRLACGVTHIAGVTQLKIIAKDIAVEDPALRIFRALALADISIDFINVSPELIMLTVKDEV AKKAVDVLENLSVFPQVKPNCAKVSTVGAGMTGVPGVMASIIQALTEEGVEILQSSDSHTTIWVLVEKENMKKAIRALHR KFKLGQRE
Sequences:
>Translated_408_residues MRFIIQKFGGTSLVTQELRELVANKIIAAVDEGFSPVVVVSAIGRAGEPYATDTLLNFALSINRDIPPREMDMLMSCGEI ISGVAMANTLQRMGHQAVLLTGAQAGIITDDNFNDARIIRVEPQNVIKHVEQGKIVIVTGFQGICQGGDITTLGRGGSDT TASALGVALNAEYIDIYTDVEGIMTADPRIVEDARILDSVTYNEICQLAHEGAKVIHPRAVEIAMQKNIPLRVRSTFLDS PGTLVTSHHGVYGTIDITRDRLACGVTHIAGVTQLKIIAKDIAVEDPALRIFRALALADISIDFINVSPELIMLTVKDEV AKKAVDVLENLSVFPQVKPNCAKVSTVGAGMTGVPGVMASIIQALTEEGVEILQSSDSHTTIWVLVEKENMKKAIRALHR KFKLGQRE >Mature_408_residues MRFIIQKFGGTSLVTQELRELVANKIIAAVDEGFSPVVVVSAIGRAGEPYATDTLLNFALSINRDIPPREMDMLMSCGEI ISGVAMANTLQRMGHQAVLLTGAQAGIITDDNFNDARIIRVEPQNVIKHVEQGKIVIVTGFQGICQGGDITTLGRGGSDT TASALGVALNAEYIDIYTDVEGIMTADPRIVEDARILDSVTYNEICQLAHEGAKVIHPRAVEIAMQKNIPLRVRSTFLDS PGTLVTSHHGVYGTIDITRDRLACGVTHIAGVTQLKIIAKDIAVEDPALRIFRALALADISIDFINVSPELIMLTVKDEV AKKAVDVLENLSVFPQVKPNCAKVSTVGAGMTGVPGVMASIIQALTEEGVEILQSSDSHTTIWVLVEKENMKKAIRALHR KFKLGQRE
Specific function: Catalyzes 2 nonconsecutive reactions in the common biosynthetic pathway leading from Asp to diaminopimelate and Lys, to Met, and to Thr and Ile. [C]
COG id: COG0527
COG function: function code E; Aspartokinases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the aspartokinase family [H]
Homologues:
Organism=Escherichia coli, GI1786183, Length=358, Percent_Identity=27.0949720670391, Blast_Score=112, Evalue=4e-26, Organism=Escherichia coli, GI1790455, Length=356, Percent_Identity=27.8089887640449, Blast_Score=97, Evalue=2e-21, Organism=Escherichia coli, GI1790376, Length=342, Percent_Identity=25.4385964912281, Blast_Score=86, Evalue=4e-18, Organism=Saccharomyces cerevisiae, GI6320893, Length=385, Percent_Identity=25.4545454545455, Blast_Score=103, Evalue=4e-23,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001048 - InterPro: IPR005260 - InterPro: IPR001341 - InterPro: IPR018042 [H]
Pfam domain/function: PF00696 AA_kinase [H]
EC number: =2.7.2.4 [H]
Molecular weight: Translated: 44042; Mature: 44042
Theoretical pI: Translated: 5.64; Mature: 5.64
Prosite motif: PS00324 ASPARTOKINASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRFIIQKFGGTSLVTQELRELVANKIIAAVDEGFSPVVVVSAIGRAGEPYATDTLLNFAL CCEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCHHHHHHHHHH SINRDIPPREMDMLMSCGEIISGVAMANTLQRMGHQAVLLTGAQAGIITDDNFNDARIIR HCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCEEECCCCCCEEEEE VEPQNVIKHVEQGKIVIVTGFQGICQGGDITTLGRGGSDTTASALGVALNAEYIDIYTDV ECHHHHHHHHHCCCEEEEECCHHHCCCCCEEEECCCCCCCHHHHHHEEECCEEEEEEECC EGIMTADPRIVEDARILDSVTYNEICQLAHEGAKVIHPRAVEIAMQKNIPLRVRSTFLDS CCEEECCCCHHHHHHHHHHCCHHHHHHHHHCCCCEECCHHEEEEECCCCCEEEEHHHCCC PGTLVTSHHGVYGTIDITRDRLACGVTHIAGVTQLKIIAKDIAVEDPALRIFRALALADI CCCEEEECCCEEEEEEEEHHHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHC SIDFINVSPELIMLTVKDEVAKKAVDVLENLSVFPQVKPNCAKVSTVGAGMTGVPGVMAS EEEEEECCCEEEEEEEHHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCCCCCCHHHHHH IIQALTEEGVEILQSSDSHTTIWVLVEKENMKKAIRALHRKFKLGQRE HHHHHHHHHHHHHHCCCCCEEEEEEEECHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure MRFIIQKFGGTSLVTQELRELVANKIIAAVDEGFSPVVVVSAIGRAGEPYATDTLLNFAL CCEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCHHHHHHHHHH SINRDIPPREMDMLMSCGEIISGVAMANTLQRMGHQAVLLTGAQAGIITDDNFNDARIIR HCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCEEECCCCCCEEEEE VEPQNVIKHVEQGKIVIVTGFQGICQGGDITTLGRGGSDTTASALGVALNAEYIDIYTDV ECHHHHHHHHHCCCEEEEECCHHHCCCCCEEEECCCCCCCHHHHHHEEECCEEEEEEECC EGIMTADPRIVEDARILDSVTYNEICQLAHEGAKVIHPRAVEIAMQKNIPLRVRSTFLDS CCEEECCCCHHHHHHHHHHCCHHHHHHHHHCCCCEECCHHEEEEECCCCCEEEEHHHCCC PGTLVTSHHGVYGTIDITRDRLACGVTHIAGVTQLKIIAKDIAVEDPALRIFRALALADI CCCEEEECCCEEEEEEEEHHHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHC SIDFINVSPELIMLTVKDEVAKKAVDVLENLSVFPQVKPNCAKVSTVGAGMTGVPGVMAS EEEEEECCCEEEEEEEHHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCCCCCCHHHHHH IIQALTEEGVEILQSSDSHTTIWVLVEKENMKKAIRALHRKFKLGQRE HHHHHHHHHHHHHHCCCCCEEEEEEEECHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8098035; 9384377 [H]