| Definition | Desulfotomaculum reducens MI-1 chromosome, complete genome. |
|---|---|
| Accession | NC_009253 |
| Length | 3,608,104 |
Click here to switch to the map view.
The map label for this gene is yeiH [C]
Identifier: 134299719
GI number: 134299719
Start: 2051532
End: 2052656
Strand: Reverse
Name: yeiH [C]
Synonym: Dred_1866
Alternate gene names: 134299719
Gene position: 2052656-2051532 (Counterclockwise)
Preceding gene: 134299720
Following gene: 134299715
Centisome position: 56.89
GC content: 41.42
Gene sequence:
>1125_bases ATGTCTAACAAAACCTCTGATATTGTCAAAACATTGCCCGGTATATTCTTAATGTTTACCATTGCGGTAATTGCTATGGG TGGAGAAGATCTTGGTATTCCCTGGCAAGGGTTGGAAACATACTTTAAAACAAATCCTTATATAACTAATACATTTATAA AGGCTGTACCTTTGAATTACATCCTTTTATGTATTCTATTGGGAATTATCATCGGGAACTTGATCAATATCCCTAAGTGG ATCATGGCAGGAGTGACAACATCTCGCCTGTTTATCAAAGTAGGGGTTATTTTACTGGGTTCACTTTATAGTTTTAGGGA TGTGGCCCAATTGGGAGGAACGGCCATATTTCTTGTTCTAACCTTTGTTATCATGACCCTAACTGTTACATTATGGCTGG GCAAAAGAGCCAATATGGATCCTGCCTCAGCTGCCGTTTTAGCCGCAGGGACATCTGTTTGTGGGGTGTCTGCCATTGTA GCTACAGCCCCTGCAGTGAGGGCGAGGACTACGGATGTTGTCTTTTCTATTGCAACAATTCTTAGCTTTGGTGTTGTTTC TATTTTTTTATTTCCTGTCGTTGGCAAGCTGTTAAATTTAAGCGCTCATCAGTTTGGCGTATGGTCAGGAACAGGAATAC TAAGTTCTGGCCAAGTTTTGGCAGTGTGTCTAATCTTTGACCCGGGGACGGCCCATCATGCCTCAGTAAGTTTAAAGACT GGGGAAATTTATAACTTGGCACGAGTCCTTTTCTTACCCTTCGTTGTACTTGCTTTAGCAGCAATGACCAGTCGTTCAGT TGAATTATTGGATGATCACATAACCATTCATACCGGACTGTGGAGTAAATTCCCACTGTTTGTTTTGGGTTTTTTAATTA TGGTCTTTCTTACTTCCTTCGGCCTGTTGGGGCAGGTATCACCACCATCGCCGGAGTTAATAACCATCCGTAAATTGTAT AACTGGTTTTTTGCCATTGGCTTGACTGGCTTAGGCATGCAAATATCCTTTTCTGAGTTAAAAAAAGCAGGAGGAAAGCC ATTAATAGTAGGGTCTTTAGCTGCCCTGCTAAAGGCCATACTGGCACTTGCTTTTGTTCTAATGTTTATTCCAGAGAAAC CTTAG
Upstream 100 bases:
>100_bases TAATTGGAGTTAGCTCATATAATAATACCTATTAATACGAATAACTGATATAATGTTAAGTGTTGTGTGAAAATATTACC ATAGGAGCGGCAAGCACCGA
Downstream 100 bases:
>100_bases CTGAGGTGGTTCGATGAATAATAGGAAGAAGCCAAGGGATAAAGAACCAAAACTGTTTTCATTGTTTGTCACAGAGAGAA TGGAGGATTATGCAGTATTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 374; Mature: 373
Protein sequence:
>374_residues MSNKTSDIVKTLPGIFLMFTIAVIAMGGEDLGIPWQGLETYFKTNPYITNTFIKAVPLNYILLCILLGIIIGNLINIPKW IMAGVTTSRLFIKVGVILLGSLYSFRDVAQLGGTAIFLVLTFVIMTLTVTLWLGKRANMDPASAAVLAAGTSVCGVSAIV ATAPAVRARTTDVVFSIATILSFGVVSIFLFPVVGKLLNLSAHQFGVWSGTGILSSGQVLAVCLIFDPGTAHHASVSLKT GEIYNLARVLFLPFVVLALAAMTSRSVELLDDHITIHTGLWSKFPLFVLGFLIMVFLTSFGLLGQVSPPSPELITIRKLY NWFFAIGLTGLGMQISFSELKKAGGKPLIVGSLAALLKAILALAFVLMFIPEKP
Sequences:
>Translated_374_residues MSNKTSDIVKTLPGIFLMFTIAVIAMGGEDLGIPWQGLETYFKTNPYITNTFIKAVPLNYILLCILLGIIIGNLINIPKW IMAGVTTSRLFIKVGVILLGSLYSFRDVAQLGGTAIFLVLTFVIMTLTVTLWLGKRANMDPASAAVLAAGTSVCGVSAIV ATAPAVRARTTDVVFSIATILSFGVVSIFLFPVVGKLLNLSAHQFGVWSGTGILSSGQVLAVCLIFDPGTAHHASVSLKT GEIYNLARVLFLPFVVLALAAMTSRSVELLDDHITIHTGLWSKFPLFVLGFLIMVFLTSFGLLGQVSPPSPELITIRKLY NWFFAIGLTGLGMQISFSELKKAGGKPLIVGSLAALLKAILALAFVLMFIPEKP >Mature_373_residues SNKTSDIVKTLPGIFLMFTIAVIAMGGEDLGIPWQGLETYFKTNPYITNTFIKAVPLNYILLCILLGIIIGNLINIPKWI MAGVTTSRLFIKVGVILLGSLYSFRDVAQLGGTAIFLVLTFVIMTLTVTLWLGKRANMDPASAAVLAAGTSVCGVSAIVA TAPAVRARTTDVVFSIATILSFGVVSIFLFPVVGKLLNLSAHQFGVWSGTGILSSGQVLAVCLIFDPGTAHHASVSLKTG EIYNLARVLFLPFVVLALAAMTSRSVELLDDHITIHTGLWSKFPLFVLGFLIMVFLTSFGLLGQVSPPSPELITIRKLYN WFFAIGLTGLGMQISFSELKKAGGKPLIVGSLAALLKAILALAFVLMFIPEKP
Specific function: Unknown
COG id: COG2855
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0324 family [H]
Homologues:
Organism=Escherichia coli, GI1788482, Length=297, Percent_Identity=29.6296296296296, Blast_Score=100, Evalue=1e-22,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR018383 [H]
Pfam domain/function: PF03601 Cons_hypoth698 [H]
EC number: NA
Molecular weight: Translated: 40039; Mature: 39907
Theoretical pI: Translated: 10.03; Mature: 10.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNKTSDIVKTLPGIFLMFTIAVIAMGGEDLGIPWQGLETYFKTNPYITNTFIKAVPLNY CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCEEHHHHHHHHHHHH ILLCILLGIIIGNLINIPKWIMAGVTTSRLFIKVGVILLGSLYSFRDVAQLGGTAIFLVL HHHHHHHHHHHHHHHCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH TFVIMTLTVTLWLGKRANMDPASAAVLAAGTSVCGVSAIVATAPAVRARTTDVVFSIATI HHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHH LSFGVVSIFLFPVVGKLLNLSAHQFGVWSGTGILSSGQVLAVCLIFDPGTAHHASVSLKT HHHHHHHHHHHHHHHHHHCCCHHHCCCEECCCCCCCCCEEEEEEEECCCCCCCCEEEEEC GEIYNLARVLFLPFVVLALAAMTSRSVELLDDHITIHTGLWSKFPLFVLGFLIMVFLTSF CHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCEEEEECCCCCCHHHHHHHHHHHHHHHC GLLGQVSPPSPELITIRKLYNWFFAIGLTGLGMQISFSELKKAGGKPLIVGSLAALLKAI CCCCCCCCCCCCEEEHHHHHHHHHHHHHHCCCCEEEHHHHHHCCCCEEHHHHHHHHHHHH LALAFVLMFIPEKP HHHHHHHHHCCCCC >Mature Secondary Structure SNKTSDIVKTLPGIFLMFTIAVIAMGGEDLGIPWQGLETYFKTNPYITNTFIKAVPLNY CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCEEHHHHHHHHHHHH ILLCILLGIIIGNLINIPKWIMAGVTTSRLFIKVGVILLGSLYSFRDVAQLGGTAIFLVL HHHHHHHHHHHHHHHCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH TFVIMTLTVTLWLGKRANMDPASAAVLAAGTSVCGVSAIVATAPAVRARTTDVVFSIATI HHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHH LSFGVVSIFLFPVVGKLLNLSAHQFGVWSGTGILSSGQVLAVCLIFDPGTAHHASVSLKT HHHHHHHHHHHHHHHHHHCCCHHHCCCEECCCCCCCCCEEEEEEEECCCCCCCCEEEEEC GEIYNLARVLFLPFVVLALAAMTSRSVELLDDHITIHTGLWSKFPLFVLGFLIMVFLTSF CHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCEEEEECCCCCCHHHHHHHHHHHHHHHC GLLGQVSPPSPELITIRKLYNWFFAIGLTGLGMQISFSELKKAGGKPLIVGSLAALLKAI CCCCCCCCCCCCEEEHHHHHHHHHHHHHHCCCCEEEHHHHHHCCCCEEHHHHHHHHHHHH LALAFVLMFIPEKP HHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA