Definition Desulfotomaculum reducens MI-1 chromosome, complete genome.
Accession NC_009253
Length 3,608,104

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The map label for this gene is 134299695

Identifier: 134299695

GI number: 134299695

Start: 2020692

End: 2022542

Strand: Reverse

Name: 134299695

Synonym: Dred_1841

Alternate gene names: NA

Gene position: 2022542-2020692 (Counterclockwise)

Preceding gene: 134299696

Following gene: 134299694

Centisome position: 56.06

GC content: 37.33

Gene sequence:

>1851_bases
ATGAACAAAGGGCTTAATGAAAAGGACCAATTTGTCAGAATAAGTTCTATGCTGGATGCCAGTGTAATGAAGATTACTAT
TTTTGCTACGGTGATTATAGTATTTTCTATGTTGCTGGTAGGGGCCATTGCCTATACTATTACAGAAAAGGAAATAGTCA
ACAAACTTAAAACAAAGGACTTAGTTAATATTGCCGAAGCAATTTCTGCTAAAATAGATGGACGAATTGAACGGGCTAAG
GAAACGTCTATTTTACTTGCAAAGGATCCCGAAATAATCAACTGGGTTTCAAGTGCAGAAAAAAATAAGGTTGCTGAACA
AAACTCATTGTTAAGAATAGCAAAACTGGCCAGGGAACATGACTACAGCAATTCCTTTATAGTCAGCAATGTTACAAAAC
ACTACTGGGATGAGAACTGCCAAATAATTGATACCATGTTAGAAAATGATCCTGATGATAGTTGGTTTTTTGATGTAACA
AAATCAAACAAACCGGTTTCTTTGGTGATAGACTACAATAACGAAAGAAAAGATACCTTTGTCTTTGTCAACGCTTTAAT
GGGTGATGTTAAAAAACCACTGGCAGTGGTAGGTGTGGGTTTGAGTCTCGGGGAGTTGTCCAAGGACTTTCAAAGTTTTA
AGTACGGTGAAAAGAGTGATCTATGGTTAGTAGATAATAAAGGGAATATTTATCTCTCTGATAATATTAATCATAATGGC
AAAAATATTAGTAAGATTTTACCTATGAAGATTGCCAGCACACTCCTTAGGAATATAGATTCAAGTCATAAAGTTTCCTC
TACACTGGAATACCAAGATTCTAAGGGGGCCCTCGTTGATATCATAAGCTATCCGATAAAATCTTCCGATTGGAAACTGT
TGGTACAAATCCCCAGAAGTGAATCAGTTTCCTTGTTAAATACTATCAAATTCAATACTTTATCCGCAACGGGAATTACC
CTTATTGCTATCACGATCTTCTTTTTCTTAATCTCACGCTACCTGGCAAATCCTTATAAAAGGACATTGCAGTTAAATCA
GGAACTTGAAGCAAAGATAACTGAAAGAACCAAAGAGCTGTTTGAAAAAAATAGTAAACTAATGGACAGCATAGATTACG
CTAAAAGAATTCAAGAATCCACTCTACCTTCTCCCGGGAAACTGACGGACTTGTTTAAAGATCACTTTTTGCTGTGGCGA
CCAAAGGACTTGGTGGGCGGAGATTTTTACTGGACTAAAAAATTCAATAAAGACTACCTTGTGGCTGTTGGAGACTGTAC
CGGACATGGTGTCCCCGGGGCGTTTATGACTATGCTAACTGTTTCGATACTAAATCAGATTGCCGACCTTAACACTAAGG
GCGACCCGGCTTTACTTCTTAAGAAGCTTAATGTTTTAATCAAACAGACATTGAATCAGGAAACGGAGGATGCCCTTACT
GACGATGGGTTGGATATTGGTCTATGCTATTTTGATGGTTCTAACCACCTCATCTTTGCGGGAGCTAAAATGTCCCTTTT
TATACGAAACAGTAAAGGCATAGAGATTATTCAAGGAAATAAAAAGAGTATCGGCTATATTCGTACTGCTCCGGACTACC
CCTATACTAATTCCAAAATAGATATAGAGAGCGGGGATCTTTTCTACCTGACAACGGATGGCTACCTTGATCAAAACGGT
GGCTTAAAAGACTATTCCTTTGGGAAAAATCGTTTTCTGAACATGATAGAGCATTGTAACAACAGGGATTTATCTAAACA
GGGCAAAGTCTTTCTTAATGAATTATTGAATTACATGGGTGAAAAGCCTCAAAGAGATGATATTACGGTAATAGGTTTTA
GAATAAGCTAA

Upstream 100 bases:

>100_bases
AGCATGGTCAACAAAGGAAGTACCTTTTATTTTTCTCTTCCGATATCTGTGCAGCATAAATCGTATTAAACTATAATTTA
AAATTTTGGGAGTAACCGTA

Downstream 100 bases:

>100_bases
TACAAACTAAATTGAAGGGATGATTGCATGAGAGGCCACTATGAACAAGTGTTTCAAAATGAAATGCAACTTCTCCTGAC
GTGTCAAAAAGATCTTAATA

Product: stage II sporulation E family protein

Products: NA

Alternate protein names: Serine Phosphatase; Methyl-Accepting Chemotaxis Protein; Stage II Sporulation Protein E; Diguanylate Cyclase; Methyl-Accepting Chemotaxis Sensory Transducer; Stage II Sporulation E Family Protein; Serine/Threonine Kinase; Serine Phosphatase RsbU Regulator Of Sigma Subunit; Sigma Factor SigB Regulation Protein RsbU; Phosphoserine Phosphatase; Bacterial Signal Domain Protein; Phosphatase; Signal Domain Protein; Serine Phosphatase RsbU; Pas/Pac Sensor Protein; Signal Transduction Protein; Response Regulator Receiver Modulated Serine Phosphatase; Serine/Threonine Protein Kinase; Serine Phosphatase Regulator Of Sigma Subunit; Transcriptional Regulator Protein; Chemotaxis Sensory Transducer; ATPase/Protein Kinase; HAMP Domain-Containing; Protein Phosphatase; Sensor Kinase; PAS/PAC Sensor Protein; GGDEF Family Protein

Number of amino acids: Translated: 616; Mature: 616

Protein sequence:

>616_residues
MNKGLNEKDQFVRISSMLDASVMKITIFATVIIVFSMLLVGAIAYTITEKEIVNKLKTKDLVNIAEAISAKIDGRIERAK
ETSILLAKDPEIINWVSSAEKNKVAEQNSLLRIAKLAREHDYSNSFIVSNVTKHYWDENCQIIDTMLENDPDDSWFFDVT
KSNKPVSLVIDYNNERKDTFVFVNALMGDVKKPLAVVGVGLSLGELSKDFQSFKYGEKSDLWLVDNKGNIYLSDNINHNG
KNISKILPMKIASTLLRNIDSSHKVSSTLEYQDSKGALVDIISYPIKSSDWKLLVQIPRSESVSLLNTIKFNTLSATGIT
LIAITIFFFLISRYLANPYKRTLQLNQELEAKITERTKELFEKNSKLMDSIDYAKRIQESTLPSPGKLTDLFKDHFLLWR
PKDLVGGDFYWTKKFNKDYLVAVGDCTGHGVPGAFMTMLTVSILNQIADLNTKGDPALLLKKLNVLIKQTLNQETEDALT
DDGLDIGLCYFDGSNHLIFAGAKMSLFIRNSKGIEIIQGNKKSIGYIRTAPDYPYTNSKIDIESGDLFYLTTDGYLDQNG
GLKDYSFGKNRFLNMIEHCNNRDLSKQGKVFLNELLNYMGEKPQRDDITVIGFRIS

Sequences:

>Translated_616_residues
MNKGLNEKDQFVRISSMLDASVMKITIFATVIIVFSMLLVGAIAYTITEKEIVNKLKTKDLVNIAEAISAKIDGRIERAK
ETSILLAKDPEIINWVSSAEKNKVAEQNSLLRIAKLAREHDYSNSFIVSNVTKHYWDENCQIIDTMLENDPDDSWFFDVT
KSNKPVSLVIDYNNERKDTFVFVNALMGDVKKPLAVVGVGLSLGELSKDFQSFKYGEKSDLWLVDNKGNIYLSDNINHNG
KNISKILPMKIASTLLRNIDSSHKVSSTLEYQDSKGALVDIISYPIKSSDWKLLVQIPRSESVSLLNTIKFNTLSATGIT
LIAITIFFFLISRYLANPYKRTLQLNQELEAKITERTKELFEKNSKLMDSIDYAKRIQESTLPSPGKLTDLFKDHFLLWR
PKDLVGGDFYWTKKFNKDYLVAVGDCTGHGVPGAFMTMLTVSILNQIADLNTKGDPALLLKKLNVLIKQTLNQETEDALT
DDGLDIGLCYFDGSNHLIFAGAKMSLFIRNSKGIEIIQGNKKSIGYIRTAPDYPYTNSKIDIESGDLFYLTTDGYLDQNG
GLKDYSFGKNRFLNMIEHCNNRDLSKQGKVFLNELLNYMGEKPQRDDITVIGFRIS
>Mature_616_residues
MNKGLNEKDQFVRISSMLDASVMKITIFATVIIVFSMLLVGAIAYTITEKEIVNKLKTKDLVNIAEAISAKIDGRIERAK
ETSILLAKDPEIINWVSSAEKNKVAEQNSLLRIAKLAREHDYSNSFIVSNVTKHYWDENCQIIDTMLENDPDDSWFFDVT
KSNKPVSLVIDYNNERKDTFVFVNALMGDVKKPLAVVGVGLSLGELSKDFQSFKYGEKSDLWLVDNKGNIYLSDNINHNG
KNISKILPMKIASTLLRNIDSSHKVSSTLEYQDSKGALVDIISYPIKSSDWKLLVQIPRSESVSLLNTIKFNTLSATGIT
LIAITIFFFLISRYLANPYKRTLQLNQELEAKITERTKELFEKNSKLMDSIDYAKRIQESTLPSPGKLTDLFKDHFLLWR
PKDLVGGDFYWTKKFNKDYLVAVGDCTGHGVPGAFMTMLTVSILNQIADLNTKGDPALLLKKLNVLIKQTLNQETEDALT
DDGLDIGLCYFDGSNHLIFAGAKMSLFIRNSKGIEIIQGNKKSIGYIRTAPDYPYTNSKIDIESGDLFYLTTDGYLDQNG
GLKDYSFGKNRFLNMIEHCNNRDLSKQGKVFLNELLNYMGEKPQRDDITVIGFRIS

Specific function: Unknown

COG id: COG2208

COG function: function code TK; Serine phosphatase RsbU, regulator of sigma subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 69503; Mature: 69503

Theoretical pI: Translated: 7.23; Mature: 7.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKGLNEKDQFVRISSMLDASVMKITIFATVIIVFSMLLVGAIAYTITEKEIVNKLKTKD
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LVNIAEAISAKIDGRIERAKETSILLAKDPEIINWVSSAEKNKVAEQNSLLRIAKLAREH
HHHHHHHHHHHHCCHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
DYSNSFIVSNVTKHYWDENCQIIDTMLENDPDDSWFFDVTKSNKPVSLVIDYNNERKDTF
CCCCCEEEHHHHHHHCCCCCHHHHHHHCCCCCCCEEEEEECCCCCEEEEEECCCCCCHHH
VFVNALMGDVKKPLAVVGVGLSLGELSKDFQSFKYGEKSDLWLVDNKGNIYLSDNINHNG
EEHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHCCCCCCCEEEEECCCCEEEECCCCCCC
KNISKILPMKIASTLLRNIDSSHKVSSTLEYQDSKGALVDIISYPIKSSDWKLLVQIPRS
CCHHHHHHHHHHHHHHHHCCCCHHHHHHEEECCCCCCEEEEECCCCCCCCCEEEEEECCC
ESVSLLNTIKFNTLSATGITLIAITIFFFLISRYLANPYKRTLQLNQELEAKITERTKEL
CCCHHHHHEEECEECCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHCHHHHHHHHHHHHHH
FEKNSKLMDSIDYAKRIQESTLPSPGKLTDLFKDHFLLWRPKDLVGGDFYWTKKFNKDYL
HHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCEEEECCCHHCCCCEEEEEECCCCEE
VAVGDCTGHGVPGAFMTMLTVSILNQIADLNTKGDPALLLKKLNVLIKQTLNQETEDALT
EEEECCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHC
DDGLDIGLCYFDGSNHLIFAGAKMSLFIRNSKGIEIIQGNKKSIGYIRTAPDYPYTNSKI
CCCCEEEEEEEECCCEEEEECCEEEEEEECCCCEEEEECCCCCCCEEEECCCCCCCCCEE
DIESGDLFYLTTDGYLDQNGGLKDYSFGKNRFLNMIEHCNNRDLSKQGKVFLNELLNYMG
EECCCCEEEEEECCEECCCCCCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHC
EKPQRDDITVIGFRIS
CCCCCCCEEEEEEEEC
>Mature Secondary Structure
MNKGLNEKDQFVRISSMLDASVMKITIFATVIIVFSMLLVGAIAYTITEKEIVNKLKTKD
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LVNIAEAISAKIDGRIERAKETSILLAKDPEIINWVSSAEKNKVAEQNSLLRIAKLAREH
HHHHHHHHHHHHCCHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
DYSNSFIVSNVTKHYWDENCQIIDTMLENDPDDSWFFDVTKSNKPVSLVIDYNNERKDTF
CCCCCEEEHHHHHHHCCCCCHHHHHHHCCCCCCCEEEEEECCCCCEEEEEECCCCCCHHH
VFVNALMGDVKKPLAVVGVGLSLGELSKDFQSFKYGEKSDLWLVDNKGNIYLSDNINHNG
EEHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHCCCCCCCEEEEECCCCEEEECCCCCCC
KNISKILPMKIASTLLRNIDSSHKVSSTLEYQDSKGALVDIISYPIKSSDWKLLVQIPRS
CCHHHHHHHHHHHHHHHHCCCCHHHHHHEEECCCCCCEEEEECCCCCCCCCEEEEEECCC
ESVSLLNTIKFNTLSATGITLIAITIFFFLISRYLANPYKRTLQLNQELEAKITERTKEL
CCCHHHHHEEECEECCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHCHHHHHHHHHHHHHH
FEKNSKLMDSIDYAKRIQESTLPSPGKLTDLFKDHFLLWRPKDLVGGDFYWTKKFNKDYL
HHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCEEEECCCHHCCCCEEEEEECCCCEE
VAVGDCTGHGVPGAFMTMLTVSILNQIADLNTKGDPALLLKKLNVLIKQTLNQETEDALT
EEEECCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHC
DDGLDIGLCYFDGSNHLIFAGAKMSLFIRNSKGIEIIQGNKKSIGYIRTAPDYPYTNSKI
CCCCEEEEEEEECCCEEEEECCEEEEEEECCCCEEEEECCCCCCCEEEECCCCCCCCCEE
DIESGDLFYLTTDGYLDQNGGLKDYSFGKNRFLNMIEHCNNRDLSKQGKVFLNELLNYMG
EECCCCEEEEEECCEECCCCCCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHC
EKPQRDDITVIGFRIS
CCCCCCCEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA