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The map label for this gene is yedQ [C]

Identifier: 134299694

GI number: 134299694

Start: 2019042

End: 2020664

Strand: Reverse

Name: yedQ [C]

Synonym: Dred_1840

Alternate gene names: 134299694

Gene position: 2020664-2019042 (Counterclockwise)

Preceding gene: 134299695

Following gene: 134299690

Centisome position: 56.0

GC content: 37.77

Gene sequence:

>1623_bases
ATGAGAGGCCACTATGAACAAGTGTTTCAAAATGAAATGCAACTTCTCCTGACGTGTCAAAAAGATCTTAATAACCCAGC
TTATAAGGACAGTGTTTTACTACCCAAGTATAAAGAACTGATATTGGAGTATGAAAAGCTTCTAAAAGTCTCTAAAAAAA
TTTTTAAGATAAGTGACACCCAAGGAAGGGTATTAAAGAAACGTGAATACGAGATTAAAAATTTACTGGATAACGCAAAT
CAAGGTTTCTTAACCTGTGGGAAAGATTTAATAGTAGATAAGGAATACAGTGCGGAGTGTATTCGGATTTTTTGTAGAAA
AATTTGCAATTTAAATATAGTTGATTTGTTAATTGATACTGGGAGTGATTTCCCTACCAGAATACAAATTGAGAAAACTT
TATCATCCATCTTTAATTCCAATGACGTTGAAGAAAAAGATTCTCTTCTAAGCAAACTTCCCCATACACTGTTTATCAAT
GATAAAAATATCAATGTTGAATACAAGCTTATCGGCCAGGAGGATAATCACGAGGAGATCCTGTTTCTAATTCTTACGGA
CGTCACCGAAAAAATTAAGTCAGATGCTCAGATAGAATATTTAAGCTTTTATGACAGTCTTACAAGTTTATATAACCGGG
CCTACATCGACAGAGTGATTCCTGAGATGCTTCATCCCGAGAATCTTCCCTTTAGCATTATTCTGGCAGATATAAACGGC
CTAAAGTTAATTAATGATGTTTTTGGACATGAAAAAGGTGATCAACTAATTATTGATACAGCCAATGTATTGAAAAAGAG
CTGTCGCAAAACAGACGTCGTGGCCCGCTGGGGTGGGGATGAATTTCTCATTATTCTCCCCAACACCAACGAGAAGTTTT
GTCAGGAGGTTGTCACTAGGATTAATAATCTTTGCCAGCATTCCGGGAGGAATCCTATTGCCATTAGTGTGGCAATGGGA
ACGGCAACGGTAGATTCTTTAGATACTAATTTCTGTAAGATCTTTGGCCAGGCAGAAAATAAAATGTACAAAAATAAATT
ACTGGAAAGCAAGGCTGTTCGCCATAAGATCATCATGAATATTGAAAAAGTACAGCAAGAGCGAGGTTTTGAAACCCAGG
GACATGTTGAGAGAGTAAGGGATATGGCCGTAAAGTTTGCTAAATTAGTGGGTGTTAAGGCAGGCTCGCCGGAAATGAAC
CATCTTATGCTATTAGTATCCCTCCATGATGTTGGTAAGGTTGCAATTCCCGAAGAAATACTTTTAAAGCCCAGTAGTCT
AATACACGAAGAGTGGGAAATCATAAAGTCACATAGTGAAATTGGTTATAGAATGGCTCAGTCCATAGGCGAAGCTGTTG
CTGCCGAAGCGATTTTGGCCTTGCGAGAACGCTGGGATGGTAATGGTTACCCCAGAGGGTTAAAGGGGGAAGAAATCCCT
TATATGGCCAGATTGTTGGCAATTGTGGATTCCTTTGATGTCATGACACACGATAGGATTTATAAGCGTTCCATTAGTGT
GGAAGAAGCCAAAAGAGAGGTTTTACAAAACAGCGGAACACAATTTGACCCGTTTCTGACAAAAACCTTCTTAGAAAAAT
TTATTAATATATATGAACAATAA

Upstream 100 bases:

>100_bases
TGAATTATTGAATTACATGGGTGAAAAGCCTCAAAGAGATGATATTACGGTAATAGGTTTTAGAATAAGCTAATACAAAC
TAAATTGAAGGGATGATTGC

Downstream 100 bases:

>100_bases
GGCCTGGCTTATGTAGGATTTAATGTTAAAAATGCATCAGTATATTAATCAACGGGCACTTTAGCTATTGATAGCTAAAG
TGCCCCATGGTTTTAATGGA

Product: metal dependent phosphohydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 540; Mature: 540

Protein sequence:

>540_residues
MRGHYEQVFQNEMQLLLTCQKDLNNPAYKDSVLLPKYKELILEYEKLLKVSKKIFKISDTQGRVLKKREYEIKNLLDNAN
QGFLTCGKDLIVDKEYSAECIRIFCRKICNLNIVDLLIDTGSDFPTRIQIEKTLSSIFNSNDVEEKDSLLSKLPHTLFIN
DKNINVEYKLIGQEDNHEEILFLILTDVTEKIKSDAQIEYLSFYDSLTSLYNRAYIDRVIPEMLHPENLPFSIILADING
LKLINDVFGHEKGDQLIIDTANVLKKSCRKTDVVARWGGDEFLIILPNTNEKFCQEVVTRINNLCQHSGRNPIAISVAMG
TATVDSLDTNFCKIFGQAENKMYKNKLLESKAVRHKIIMNIEKVQQERGFETQGHVERVRDMAVKFAKLVGVKAGSPEMN
HLMLLVSLHDVGKVAIPEEILLKPSSLIHEEWEIIKSHSEIGYRMAQSIGEAVAAEAILALRERWDGNGYPRGLKGEEIP
YMARLLAIVDSFDVMTHDRIYKRSISVEEAKREVLQNSGTQFDPFLTKTFLEKFINIYEQ

Sequences:

>Translated_540_residues
MRGHYEQVFQNEMQLLLTCQKDLNNPAYKDSVLLPKYKELILEYEKLLKVSKKIFKISDTQGRVLKKREYEIKNLLDNAN
QGFLTCGKDLIVDKEYSAECIRIFCRKICNLNIVDLLIDTGSDFPTRIQIEKTLSSIFNSNDVEEKDSLLSKLPHTLFIN
DKNINVEYKLIGQEDNHEEILFLILTDVTEKIKSDAQIEYLSFYDSLTSLYNRAYIDRVIPEMLHPENLPFSIILADING
LKLINDVFGHEKGDQLIIDTANVLKKSCRKTDVVARWGGDEFLIILPNTNEKFCQEVVTRINNLCQHSGRNPIAISVAMG
TATVDSLDTNFCKIFGQAENKMYKNKLLESKAVRHKIIMNIEKVQQERGFETQGHVERVRDMAVKFAKLVGVKAGSPEMN
HLMLLVSLHDVGKVAIPEEILLKPSSLIHEEWEIIKSHSEIGYRMAQSIGEAVAAEAILALRERWDGNGYPRGLKGEEIP
YMARLLAIVDSFDVMTHDRIYKRSISVEEAKREVLQNSGTQFDPFLTKTFLEKFINIYEQ
>Mature_540_residues
MRGHYEQVFQNEMQLLLTCQKDLNNPAYKDSVLLPKYKELILEYEKLLKVSKKIFKISDTQGRVLKKREYEIKNLLDNAN
QGFLTCGKDLIVDKEYSAECIRIFCRKICNLNIVDLLIDTGSDFPTRIQIEKTLSSIFNSNDVEEKDSLLSKLPHTLFIN
DKNINVEYKLIGQEDNHEEILFLILTDVTEKIKSDAQIEYLSFYDSLTSLYNRAYIDRVIPEMLHPENLPFSIILADING
LKLINDVFGHEKGDQLIIDTANVLKKSCRKTDVVARWGGDEFLIILPNTNEKFCQEVVTRINNLCQHSGRNPIAISVAMG
TATVDSLDTNFCKIFGQAENKMYKNKLLESKAVRHKIIMNIEKVQQERGFETQGHVERVRDMAVKFAKLVGVKAGSPEMN
HLMLLVSLHDVGKVAIPEEILLKPSSLIHEEWEIIKSHSEIGYRMAQSIGEAVAAEAILALRERWDGNGYPRGLKGEEIP
YMARLLAIVDSFDVMTHDRIYKRSISVEEAKREVLQNSGTQFDPFLTKTFLEKFINIYEQ

Specific function: Unknown

COG id: COG2206

COG function: function code T; HD-GYP domain

Gene ontology:

Cell location: Integral membrane protein (Potential) [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HD domain [H]

Homologues:

Organism=Escherichia coli, GI87082007, Length=172, Percent_Identity=29.0697674418605, Blast_Score=86, Evalue=6e-18,
Organism=Escherichia coli, GI87081881, Length=119, Percent_Identity=33.6134453781513, Blast_Score=84, Evalue=3e-17,
Organism=Escherichia coli, GI1788381, Length=172, Percent_Identity=29.0697674418605, Blast_Score=81, Evalue=1e-16,
Organism=Escherichia coli, GI1787541, Length=172, Percent_Identity=29.6511627906977, Blast_Score=77, Evalue=3e-15,
Organism=Escherichia coli, GI1787262, Length=151, Percent_Identity=29.8013245033113, Blast_Score=76, Evalue=7e-15,
Organism=Escherichia coli, GI145693134, Length=126, Percent_Identity=30.1587301587302, Blast_Score=69, Evalue=5e-13,
Organism=Escherichia coli, GI87081974, Length=148, Percent_Identity=31.7567567567568, Blast_Score=68, Evalue=2e-12,
Organism=Escherichia coli, GI1786584, Length=160, Percent_Identity=25.625, Blast_Score=67, Evalue=2e-12,
Organism=Escherichia coli, GI1787816, Length=151, Percent_Identity=31.7880794701987, Blast_Score=63, Evalue=6e-11,
Organism=Escherichia coli, GI1787802, Length=160, Percent_Identity=28.125, Blast_Score=62, Evalue=1e-10,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001054
- InterPro:   IPR000160
- InterPro:   IPR003607 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 61915; Mature: 61915

Theoretical pI: Translated: 6.22; Mature: 6.22

Prosite motif: PS50887 GGDEF

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRGHYEQVFQNEMQLLLTCQKDLNNPAYKDSVLLPKYKELILEYEKLLKVSKKIFKISDT
CCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCC
QGRVLKKREYEIKNLLDNANQGFLTCGKDLIVDKEYSAECIRIFCRKICNLNIVDLLIDT
CCHHHHHHHHHHHHHHCCCCCCCEECCCHHEECCCCHHHHHHHHHHHHCCCCEEEEEEEC
GSDFPTRIQIEKTLSSIFNSNDVEEKDSLLSKLPHTLFINDKNINVEYKLIGQEDNHEEI
CCCCCCEEEHHHHHHHHHCCCCCHHHHHHHHHCCCEEEEECCCCEEEEEEECCCCCCCCE
LFLILTDVTEKIKSDAQIEYLSFYDSLTSLYNRAYIDRVIPEMLHPENLPFSIILADING
EEEEHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCC
LKLINDVFGHEKGDQLIIDTANVLKKSCRKTDVVARWGGDEFLIILPNTNEKFCQEVVTR
HHHHHHHHCCCCCCEEEEECHHHHHHHHHHHHHEEEECCCEEEEEECCCCHHHHHHHHHH
INNLCQHSGRNPIAISVAMGTATVDSLDTNFCKIFGQAENKMYKNKLLESKAVRHKIIMN
HHHHHHHCCCCCEEEEEEECCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IEKVQQERGFETQGHVERVRDMAVKFAKLVGVKAGSPEMNHLMLLVSLHDVGKVAIPEEI
HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHEEEEEEHHCCCCCCCCHHH
LLKPSSLIHEEWEIIKSHSEIGYRMAQSIGEAVAAEAILALRERWDGNGYPRGLKGEEIP
HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCH
YMARLLAIVDSFDVMTHDRIYKRSISVEEAKREVLQNSGTQFDPFLTKTFLEKFINIYEQ
HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MRGHYEQVFQNEMQLLLTCQKDLNNPAYKDSVLLPKYKELILEYEKLLKVSKKIFKISDT
CCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCC
QGRVLKKREYEIKNLLDNANQGFLTCGKDLIVDKEYSAECIRIFCRKICNLNIVDLLIDT
CCHHHHHHHHHHHHHHCCCCCCCEECCCHHEECCCCHHHHHHHHHHHHCCCCEEEEEEEC
GSDFPTRIQIEKTLSSIFNSNDVEEKDSLLSKLPHTLFINDKNINVEYKLIGQEDNHEEI
CCCCCCEEEHHHHHHHHHCCCCCHHHHHHHHHCCCEEEEECCCCEEEEEEECCCCCCCCE
LFLILTDVTEKIKSDAQIEYLSFYDSLTSLYNRAYIDRVIPEMLHPENLPFSIILADING
EEEEHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCC
LKLINDVFGHEKGDQLIIDTANVLKKSCRKTDVVARWGGDEFLIILPNTNEKFCQEVVTR
HHHHHHHHCCCCCCEEEEECHHHHHHHHHHHHHEEEECCCEEEEEECCCCHHHHHHHHHH
INNLCQHSGRNPIAISVAMGTATVDSLDTNFCKIFGQAENKMYKNKLLESKAVRHKIIMN
HHHHHHHCCCCCEEEEEEECCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IEKVQQERGFETQGHVERVRDMAVKFAKLVGVKAGSPEMNHLMLLVSLHDVGKVAIPEEI
HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHEEEEEEHHCCCCCCCCHHH
LLKPSSLIHEEWEIIKSHSEIGYRMAQSIGEAVAAEAILALRERWDGNGYPRGLKGEEIP
HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCH
YMARLLAIVDSFDVMTHDRIYKRSISVEEAKREVLQNSGTQFDPFLTKTFLEKFINIYEQ
HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9537320 [H]