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The map label for this gene is ybbM [C]

Identifier: 134299661

GI number: 134299661

Start: 1981045

End: 1981842

Strand: Reverse

Name: ybbM [C]

Synonym: Dred_1807

Alternate gene names: 134299661

Gene position: 1981842-1981045 (Counterclockwise)

Preceding gene: 134299662

Following gene: 134299659

Centisome position: 54.93

GC content: 45.74

Gene sequence:

>798_bases
ATGGACAATTCAACCATTCCCATTTCTAATTTACAATTGGCTTTTTCTGTTGTTCTGATTATGATAACCGGGGGGATCGC
TTCCTTTCTTAAGTTGGGGCTGTTAAAGTCCTTACTTTGGGGAACGGTACGTACCTTTGTGCAACTCACCTTGGTAGGGT
ATGCTCTGACCTATATCTTTGCCATTAATAAACTTTGGCTTGTTGTTGGTATTATTACTTTTATGTGTTATTTCGCTGCT
CGGGCTGCGGTAAAAAGAACACCCAATGTTCCAAATTACCCCACCACCCTGGCCTTTTTATCTCTTTCAGCCAGCACTTA
TCTAGTGGGTTCCTTTGTGACAGGGTTGATTATTGCGCCGGACCCCTGGTACTCTGCCCGCATCGCCATTCCTATTTTTG
GTATGATATTAGGTAATTCAATGAATGGTATTGCCCTTTCCCTCGACCGCCTTTACGGAGAGGTAAGAGCTCGCTCAGGG
GAAATTGAAGCCCTGCTAACCTTTGGGGCAACTCCCTGGGAAGCTGTTCGCTCTAGCGTTCGGGAGGCCATTCGGGCGGG
TATGACCCCGACCATTAATTCCTTAATGGTGGTTGGTTTAGTCAGTTTACCCGGGATGATGACAGGGCAAATACTGGGCG
GGGCAGATCCCAGAGAAGCGGTTCGTTATCAAATTGTTGTAATGTTAATGATTGCAACAGCCGTTGCCATAGGTTGTCTT
ATTATGGTAGGGCTATCCTACAAAAAACTCTTTACCAGCGATGGTGCTTTGCAACCCCATCTTTTATACAGTCGTTAA

Upstream 100 bases:

>100_bases
GACTCCCGGGCGTGCTGCTATGCTGATCTCTCACAATCATGATTACCAGACTCTAGATTGGGTTTCTTTTTTGGATATAG
TTCCTAGTTAGGAGGTTTTT

Downstream 100 bases:

>100_bases
AGAAAACTTGGCTTACGCCAAGCCTTTAGGCGACGGCGTAAGCCTTAGTTGCCCTTATGCAAGTTGGAAAGTTTTATACT
TTCTGACTTGCTAAAAAAAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 265; Mature: 265

Protein sequence:

>265_residues
MDNSTIPISNLQLAFSVVLIMITGGIASFLKLGLLKSLLWGTVRTFVQLTLVGYALTYIFAINKLWLVVGIITFMCYFAA
RAAVKRTPNVPNYPTTLAFLSLSASTYLVGSFVTGLIIAPDPWYSARIAIPIFGMILGNSMNGIALSLDRLYGEVRARSG
EIEALLTFGATPWEAVRSSVREAIRAGMTPTINSLMVVGLVSLPGMMTGQILGGADPREAVRYQIVVMLMIATAVAIGCL
IMVGLSYKKLFTSDGALQPHLLYSR

Sequences:

>Translated_265_residues
MDNSTIPISNLQLAFSVVLIMITGGIASFLKLGLLKSLLWGTVRTFVQLTLVGYALTYIFAINKLWLVVGIITFMCYFAA
RAAVKRTPNVPNYPTTLAFLSLSASTYLVGSFVTGLIIAPDPWYSARIAIPIFGMILGNSMNGIALSLDRLYGEVRARSG
EIEALLTFGATPWEAVRSSVREAIRAGMTPTINSLMVVGLVSLPGMMTGQILGGADPREAVRYQIVVMLMIATAVAIGCL
IMVGLSYKKLFTSDGALQPHLLYSR
>Mature_265_residues
MDNSTIPISNLQLAFSVVLIMITGGIASFLKLGLLKSLLWGTVRTFVQLTLVGYALTYIFAINKLWLVVGIITFMCYFAA
RAAVKRTPNVPNYPTTLAFLSLSASTYLVGSFVTGLIIAPDPWYSARIAIPIFGMILGNSMNGIALSLDRLYGEVRARSG
EIEALLTFGATPWEAVRSSVREAIRAGMTPTINSLMVVGLVSLPGMMTGQILGGADPREAVRYQIVVMLMIATAVAIGCL
IMVGLSYKKLFTSDGALQPHLLYSR

Specific function: Unknown

COG id: COG0390

COG function: function code R; ABC-type uncharacterized transport system, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0014 family [H]

Homologues:

Organism=Escherichia coli, GI87081746, Length=251, Percent_Identity=36.2549800796813, Blast_Score=150, Evalue=7e-38,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005226 [H]

Pfam domain/function: PF03649 UPF0014 [H]

EC number: NA

Molecular weight: Translated: 28594; Mature: 28594

Theoretical pI: Translated: 9.97; Mature: 9.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDNSTIPISNLQLAFSVVLIMITGGIASFLKLGLLKSLLWGTVRTFVQLTLVGYALTYIF
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AINKLWLVVGIITFMCYFAARAAVKRTPNVPNYPTTLAFLSLSASTYLVGSFVTGLIIAP
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCEEECC
DPWYSARIAIPIFGMILGNSMNGIALSLDRLYGEVRARSGEIEALLTFGATPWEAVRSSV
CCCCCCEEHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCEEEEEEECCCCHHHHHHHH
REAIRAGMTPTINSLMVVGLVSLPGMMTGQILGGADPREAVRYQIVVMLMIATAVAIGCL
HHHHHCCCCCCHHHHHHHHHHHCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
IMVGLSYKKLFTSDGALQPHLLYSR
HHHCCCHHHHHCCCCCCCCCCCCCC
>Mature Secondary Structure
MDNSTIPISNLQLAFSVVLIMITGGIASFLKLGLLKSLLWGTVRTFVQLTLVGYALTYIF
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AINKLWLVVGIITFMCYFAARAAVKRTPNVPNYPTTLAFLSLSASTYLVGSFVTGLIIAP
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCEEECC
DPWYSARIAIPIFGMILGNSMNGIALSLDRLYGEVRARSGEIEALLTFGATPWEAVRSSV
CCCCCCEEHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCEEEEEEECCCCHHHHHHHH
REAIRAGMTPTINSLMVVGLVSLPGMMTGQILGGADPREAVRYQIVVMLMIATAVAIGCL
HHHHHCCCCCCHHHHHHHHHHHCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
IMVGLSYKKLFTSDGALQPHLLYSR
HHHCCCHHHHHCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]