Definition Desulfotomaculum reducens MI-1 chromosome, complete genome.
Accession NC_009253
Length 3,608,104

Click here to switch to the map view.

The map label for this gene is 134299659

Identifier: 134299659

GI number: 134299659

Start: 1980168

End: 1980494

Strand: Reverse

Name: 134299659

Synonym: Dred_1805

Alternate gene names: NA

Gene position: 1980494-1980168 (Counterclockwise)

Preceding gene: 134299661

Following gene: 134299655

Centisome position: 54.89

GC content: 33.94

Gene sequence:

>327_bases
ATGGATGAAAAGGAACAATTATATGTAAATTTAATGATGGATCATTTACCCGAGGATTGTGAGGTCATAGCCTTGAAAAA
ACAAGGTTATTTGACGGAAAATATGCAGTTTACCCAAAAGGCTCATCAATATGTGGAAGATTTTCTTGCTTCAAAAAAAG
AAGCAGTATTCTTAGCAATTATAGAGCTGGGACCAGAGGCAAGGAAAAGTTCTATTATGAAATATGCAGGGATTAAACAA
ATGGGAGTTCTGGCAGATGTTGTTAACAGACTTGTGGTGGAAGGCAAAGTAAAAAAAGAAAACGGAAAATTTTATATATT
AGCATAA

Upstream 100 bases:

>100_bases
CTTCCCCTTTTTGGTGGAAAGTGTTTTAGACCTTGCAGGAAACTTACCATGGAAAATCAAATTTTATACTACAAAATAGT
TCACATGGGGGTGTTGATTT

Downstream 100 bases:

>100_bases
AAGGGCACAAGCAACCAAGTTTTTCTAAACAATAAACAAAGCATCCCGGATCACATGTGGTGTTCGGGATGCTTTGTTTA
TTGGAAAAATTAAAATAATT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 108; Mature: 108

Protein sequence:

>108_residues
MDEKEQLYVNLMMDHLPEDCEVIALKKQGYLTENMQFTQKAHQYVEDFLASKKEAVFLAIIELGPEARKSSIMKYAGIKQ
MGVLADVVNRLVVEGKVKKENGKFYILA

Sequences:

>Translated_108_residues
MDEKEQLYVNLMMDHLPEDCEVIALKKQGYLTENMQFTQKAHQYVEDFLASKKEAVFLAIIELGPEARKSSIMKYAGIKQ
MGVLADVVNRLVVEGKVKKENGKFYILA
>Mature_108_residues
MDEKEQLYVNLMMDHLPEDCEVIALKKQGYLTENMQFTQKAHQYVEDFLASKKEAVFLAIIELGPEARKSSIMKYAGIKQ
MGVLADVVNRLVVEGKVKKENGKFYILA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12342; Mature: 12342

Theoretical pI: Translated: 6.53; Mature: 6.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
5.6 %Met     (Translated Protein)
6.5 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
5.6 %Met     (Mature Protein)
6.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDEKEQLYVNLMMDHLPEDCEVIALKKQGYLTENMQFTQKAHQYVEDFLASKKEAVFLAI
CCCHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEE
IELGPEARKSSIMKYAGIKQMGVLADVVNRLVVEGKVKKENGKFYILA
EECCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCEEEECCCCEEEEC
>Mature Secondary Structure
MDEKEQLYVNLMMDHLPEDCEVIALKKQGYLTENMQFTQKAHQYVEDFLASKKEAVFLAI
CCCHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEE
IELGPEARKSSIMKYAGIKQMGVLADVVNRLVVEGKVKKENGKFYILA
EECCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCEEEECCCCEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA