| Definition | Desulfotomaculum reducens MI-1 chromosome, complete genome. |
|---|---|
| Accession | NC_009253 |
| Length | 3,608,104 |
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The map label for this gene is 134299655
Identifier: 134299655
GI number: 134299655
Start: 1975994
End: 1976623
Strand: Reverse
Name: 134299655
Synonym: Dred_1801
Alternate gene names: NA
Gene position: 1976623-1975994 (Counterclockwise)
Preceding gene: 134299659
Following gene: 134299648
Centisome position: 54.78
GC content: 36.67
Gene sequence:
>630_bases ATGATAGAACAAACAAAAGTAGTCAATCTGGAGCAGGAAATGGTTAACAAAAATACAGATTTATTTGTTAATATTACAGA AATTATTGGTGAATTGTTAAAAAGAGGGCTGGCTACCATCTCCTTCAATTATACAGATTGTGCCATAACCTTCGCTACTA CACCAGAAGTGCAAAGGGCCTTTGCCCAATACTCTGTGGAAAGGGTTCAGTCCATAACAGATGAAGTGATCGACATTACG TTAAAGTTGCTGGAGAATCAAGAACTTACGATGCTAAACCAAGCCCAAGATGCCGGAAAAGCAGTTCATGGCACATTGCA AAAGAAAATTAGCACTGTAAAGAAATTTATCTTAAACAACAGGCTTCATAATGCCTATGCTTTTTATAGCACGTCCATTG GAAATGTATTGGATCAATTCATTGCTCAAAAAGTAGTAAAACCTGCTACTGATCGGTATGATTCCCTGGAAACTGTAATG GTCAAACTTACCACAAAGGATAACATGGATAACAGAAACCGACAAAGTATAAGTTTTGAAATGTACGGTGATCAAGTGGA CGAAGTCATTGAGACCTTAAAAAAAATTAAACAAGATATTTTATCTAGCAGCAATCAAGATCCCCAGTAG
Upstream 100 bases:
>100_bases ACATTTTAAATCCTTTATAAGTTTGTGACAACTCTTATTTATATTGTTTTAAAGGGAATAATAAGTCAGTAATTATCTTA GCAAGGAGGAGTTCTTCTTT
Downstream 100 bases:
>100_bases GGCTTCCTCAATTGCTGTTTATAGCAAAGCTTCTTTCCTTTGTTTTTCAACCATGGCTTTAATTTTAAGCTCATTATAGT AGTTTTCTAGCTTTTTGGCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 209; Mature: 209
Protein sequence:
>209_residues MIEQTKVVNLEQEMVNKNTDLFVNITEIIGELLKRGLATISFNYTDCAITFATTPEVQRAFAQYSVERVQSITDEVIDIT LKLLENQELTMLNQAQDAGKAVHGTLQKKISTVKKFILNNRLHNAYAFYSTSIGNVLDQFIAQKVVKPATDRYDSLETVM VKLTTKDNMDNRNRQSISFEMYGDQVDEVIETLKKIKQDILSSSNQDPQ
Sequences:
>Translated_209_residues MIEQTKVVNLEQEMVNKNTDLFVNITEIIGELLKRGLATISFNYTDCAITFATTPEVQRAFAQYSVERVQSITDEVIDIT LKLLENQELTMLNQAQDAGKAVHGTLQKKISTVKKFILNNRLHNAYAFYSTSIGNVLDQFIAQKVVKPATDRYDSLETVM VKLTTKDNMDNRNRQSISFEMYGDQVDEVIETLKKIKQDILSSSNQDPQ >Mature_209_residues MIEQTKVVNLEQEMVNKNTDLFVNITEIIGELLKRGLATISFNYTDCAITFATTPEVQRAFAQYSVERVQSITDEVIDIT LKLLENQELTMLNQAQDAGKAVHGTLQKKISTVKKFILNNRLHNAYAFYSTSIGNVLDQFIAQKVVKPATDRYDSLETVM VKLTTKDNMDNRNRQSISFEMYGDQVDEVIETLKKIKQDILSSSNQDPQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23762; Mature: 23762
Theoretical pI: Translated: 4.93; Mature: 4.93
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIEQTKVVNLEQEMVNKNTDLFVNITEIIGELLKRGLATISFNYTDCAITFATTPEVQRA CCCCCHHCCHHHHHHCCCCCEEEEHHHHHHHHHHCCHHEEEECCCCEEEEEECCHHHHHH FAQYSVERVQSITDEVIDITLKLLENQELTMLNQAQDAGKAVHGTLQKKISTVKKFILNN HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC RLHNAYAFYSTSIGNVLDQFIAQKVVKPATDRYDSLETVMVKLTTKDNMDNRNRQSISFE HHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHEEEECCCCCCCCCCCEEEEE MYGDQVDEVIETLKKIKQDILSSSNQDPQ ECCHHHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MIEQTKVVNLEQEMVNKNTDLFVNITEIIGELLKRGLATISFNYTDCAITFATTPEVQRA CCCCCHHCCHHHHHHCCCCCEEEEHHHHHHHHHHCCHHEEEECCCCEEEEEECCHHHHHH FAQYSVERVQSITDEVIDITLKLLENQELTMLNQAQDAGKAVHGTLQKKISTVKKFILNN HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC RLHNAYAFYSTSIGNVLDQFIAQKVVKPATDRYDSLETVMVKLTTKDNMDNRNRQSISFE HHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHEEEECCCCCCCCCCCEEEEE MYGDQVDEVIETLKKIKQDILSSSNQDPQ ECCHHHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA