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The map label for this gene is 134299442

Identifier: 134299442

GI number: 134299442

Start: 1724934

End: 1726655

Strand: Reverse

Name: 134299442

Synonym: Dred_1585

Alternate gene names: NA

Gene position: 1726655-1724934 (Counterclockwise)

Preceding gene: 134299450

Following gene: 134299441

Centisome position: 47.85

GC content: 45.82

Gene sequence:

>1722_bases
ATGGGGTTAATCTATACTGGAGCAAAATGTCGTGATTGCTACCGTTGTGTAAGGATCTGCAACTTAAAGGCCATCAGGAT
GAATACCGGTCATCAGGGCAGATTTCATGCCCAGGTCATAGATGAACTTTGTGTCCATTGCGGCCAGTGTATTCTTGCTT
GCCCCCAAAGGGCCAAAAGGCCCGTTTCCGATCTCAAAGAAGTAAAACAACTCTTGGCCGAAGGAACCCCCGTCATTGCC
GTGGTGGCCGCTTCCTTCATCAGTGCCCTTCCCCTGAAAAAACCGGATTTATTGCCAACCCTATTAAAGAAATTGGGTTT
TATTGAAGTTCAAGAAACCTCCATTGGTGCTGGTATGGTTACACAAGAGTATCTAAACATGGGTTTTGAAACCCCCCGCC
TGATTAGTTACTGTCCGGTGATTGTTAATTTAATTGAGCGGTATTATCCCGAATTAATTACCCTGCTGGCTCCCATCGTT
TCACCTATGATCGCCCAGGGAAGAATTATAAAATCCCTCAATCCCTATGCCAAAGTGGTCTACATAGGCCCCTGTGCAGC
CAAACGGGATGAAGCTCAACTCCTGGGCCTGAAGGATACCATTGATTATTTCCTGGGTTTTAACGAGCTATGGGATTGGA
TTCAGGACTCGGTACCCTTGACGGAAGATCTTTCCCCTTCGGCCTTTGACAGCTTTTCCCCTTGCCAAAACCGCATTTAT
CCCGTGGAAGGCGGTGTCATTTGGGCCGTAGCCGAAGAACTGCGGCAAGCCGGGGAAGATTTTCTGACCATATCTGGTTT
GGACAGTTGCATCGAATTTGTTAAACACCTTAGTCAAGGACAGATTACAAACCCTCCTAAGTTAATGGAACTCTGGGCCT
GTAAAGGTGGCTGCATTAATGGTCCCCTTTCCCTCTGTCTGGAAGAAAGTCTTTTTATGCGACAACGCAAACTTCTGGAG
TATTACAACTCGTCCGGTGAATGTGTTTTCGTAATTGATGATTATAAACTGCCTGAGATTCCTTTAAAAAGAGATTTTGT
CAACCGTAAGGTGGAGCAACCCTATCCAAGTGAAGCTGAAATTCAAGGTATTTTGGCCAGAACCGGCAAATTATCAGCAG
CCCAGGAGTTTAACTGCGGAAATTGTGGCTACAACTCCTGCCGTGACAAGGCTGTGGCTGTTTATCAGGGTAAGGCCGAA
GTAGAAATGTGTATTCCCTATATGAGAAAACGGGCAGAATCCATGTCAAATCGGGTCATTTCGGCCATGCCCAATGCCAT
CATCGTGGTGGGTAAAAATCTGGATATTTTAGAGATCAATCCAGCGGCAGAGGCACTCTTTCAGTGTTCTGCTTCCGAGG
TTGTGGGACAAAGACTTCTCACTCTAATGCCTGCCACTAATTTCTTGAAGGTGATTCAAAGCGGGGAAATGATTAATACC
ACCGAGACCTATCCCTTACTGGGGATTGTCACCCATGAGATTATTTTCCCAGTCAAAGGAACCGATGCGGTGGTGGGAAT
CTTTATTAACATAACTTCCGAAAAGAAACAGCGGGAACAGTACGAATTAATTAAAAGTCAAACCATCCAACAGGCCCAGG
ATGTAATTGAAAAACAAATGATGGTGGCCCAGGAAATAGCGGGTCTGCTGGGCGAAGCAACGGCGGAGACCAAGGTTCAA
CTGGGTAAATTAATTAAATTAATGCGGCAAGAAACCCTTTAG

Upstream 100 bases:

>100_bases
ATCTCAACCACAAGATAAATTGCGTAAAGGAAAAGGGAAACTTCCTAGTAAAATTGAATCAAGTAGTATTTAACAATTCC
CCTAGAAACGAGGTGTAATT

Downstream 100 bases:

>100_bases
AGAGGAGTGCCGCCAATGAAAATTTATTTAGATATCGGTGTGGCTCAACTAAAAAAATATGGCGAGGAACTTTGTGGGGA
CAGTGTGGAGATTGTACGAA

Product: putative PAS/PAC sensor protein

Products: NA

Alternate protein names: CpI; Fe-only hydrogenase; [Fe] hydrogenase [H]

Number of amino acids: Translated: 573; Mature: 572

Protein sequence:

>573_residues
MGLIYTGAKCRDCYRCVRICNLKAIRMNTGHQGRFHAQVIDELCVHCGQCILACPQRAKRPVSDLKEVKQLLAEGTPVIA
VVAASFISALPLKKPDLLPTLLKKLGFIEVQETSIGAGMVTQEYLNMGFETPRLISYCPVIVNLIERYYPELITLLAPIV
SPMIAQGRIIKSLNPYAKVVYIGPCAAKRDEAQLLGLKDTIDYFLGFNELWDWIQDSVPLTEDLSPSAFDSFSPCQNRIY
PVEGGVIWAVAEELRQAGEDFLTISGLDSCIEFVKHLSQGQITNPPKLMELWACKGGCINGPLSLCLEESLFMRQRKLLE
YYNSSGECVFVIDDYKLPEIPLKRDFVNRKVEQPYPSEAEIQGILARTGKLSAAQEFNCGNCGYNSCRDKAVAVYQGKAE
VEMCIPYMRKRAESMSNRVISAMPNAIIVVGKNLDILEINPAAEALFQCSASEVVGQRLLTLMPATNFLKVIQSGEMINT
TETYPLLGIVTHEIIFPVKGTDAVVGIFINITSEKKQREQYELIKSQTIQQAQDVIEKQMMVAQEIAGLLGEATAETKVQ
LGKLIKLMRQETL

Sequences:

>Translated_573_residues
MGLIYTGAKCRDCYRCVRICNLKAIRMNTGHQGRFHAQVIDELCVHCGQCILACPQRAKRPVSDLKEVKQLLAEGTPVIA
VVAASFISALPLKKPDLLPTLLKKLGFIEVQETSIGAGMVTQEYLNMGFETPRLISYCPVIVNLIERYYPELITLLAPIV
SPMIAQGRIIKSLNPYAKVVYIGPCAAKRDEAQLLGLKDTIDYFLGFNELWDWIQDSVPLTEDLSPSAFDSFSPCQNRIY
PVEGGVIWAVAEELRQAGEDFLTISGLDSCIEFVKHLSQGQITNPPKLMELWACKGGCINGPLSLCLEESLFMRQRKLLE
YYNSSGECVFVIDDYKLPEIPLKRDFVNRKVEQPYPSEAEIQGILARTGKLSAAQEFNCGNCGYNSCRDKAVAVYQGKAE
VEMCIPYMRKRAESMSNRVISAMPNAIIVVGKNLDILEINPAAEALFQCSASEVVGQRLLTLMPATNFLKVIQSGEMINT
TETYPLLGIVTHEIIFPVKGTDAVVGIFINITSEKKQREQYELIKSQTIQQAQDVIEKQMMVAQEIAGLLGEATAETKVQ
LGKLIKLMRQETL
>Mature_572_residues
GLIYTGAKCRDCYRCVRICNLKAIRMNTGHQGRFHAQVIDELCVHCGQCILACPQRAKRPVSDLKEVKQLLAEGTPVIAV
VAASFISALPLKKPDLLPTLLKKLGFIEVQETSIGAGMVTQEYLNMGFETPRLISYCPVIVNLIERYYPELITLLAPIVS
PMIAQGRIIKSLNPYAKVVYIGPCAAKRDEAQLLGLKDTIDYFLGFNELWDWIQDSVPLTEDLSPSAFDSFSPCQNRIYP
VEGGVIWAVAEELRQAGEDFLTISGLDSCIEFVKHLSQGQITNPPKLMELWACKGGCINGPLSLCLEESLFMRQRKLLEY
YNSSGECVFVIDDYKLPEIPLKRDFVNRKVEQPYPSEAEIQGILARTGKLSAAQEFNCGNCGYNSCRDKAVAVYQGKAEV
EMCIPYMRKRAESMSNRVISAMPNAIIVVGKNLDILEINPAAEALFQCSASEVVGQRLLTLMPATNFLKVIQSGEMINTT
ETYPLLGIVTHEIIFPVKGTDAVVGIFINITSEKKQREQYELIKSQTIQQAQDVIEKQMMVAQEIAGLLGEATAETKVQL
GKLIKLMRQETL

Specific function: Unknown

COG id: COG4624

COG function: function code R; Iron only hydrogenase large subunit, C-terminal domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 2 4Fe-4S ferredoxin-type domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017896
- InterPro:   IPR017900
- InterPro:   IPR012675
- InterPro:   IPR009016
- InterPro:   IPR004108
- InterPro:   IPR003149
- InterPro:   IPR013352
- InterPro:   IPR001041 [H]

Pfam domain/function: PF02906 Fe_hyd_lg_C; PF02256 Fe_hyd_SSU [H]

EC number: =1.12.7.2 [H]

Molecular weight: Translated: 63726; Mature: 63595

Theoretical pI: Translated: 5.86; Mature: 5.86

Prosite motif: PS50112 PAS ; PS00198 4FE4S_FERREDOXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.7 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
6.5 %Cys+Met (Translated Protein)
3.7 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
6.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGLIYTGAKCRDCYRCVRICNLKAIRMNTGHQGRFHAQVIDELCVHCGQCILACPQRAKR
CCEEECCHHHHHHHHHHHHHCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHCC
PVSDLKEVKQLLAEGTPVIAVVAASFISALPLKKPDLLPTLLKKLGFIEVQETSIGAGMV
CHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCEEEECCCCCCCHH
TQEYLNMGFETPRLISYCPVIVNLIERYYPELITLLAPIVSPMIAQGRIIKSLNPYAKVV
HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCEEEE
YIGPCAAKRDEAQLLGLKDTIDYFLGFNELWDWIQDSVPLTEDLSPSAFDSFSPCQNRIY
EEECCCCCCCHHHHCCHHHHHHHHHCHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHCCEE
PVEGGVIWAVAEELRQAGEDFLTISGLDSCIEFVKHLSQGQITNPPKLMELWACKGGCIN
ECCCCCHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCC
GPLSLCLEESLFMRQRKLLEYYNSSGECVFVIDDYKLPEIPLKRDFVNRKVEQPYPSEAE
CHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCHHHHHHHHCCCCCCCHHH
IQGILARTGKLSAAQEFNCGNCGYNSCRDKAVAVYQGKAEVEMCIPYMRKRAESMSNRVI
HHHHHHHCCCCCCCCCCCCCCCCCCHHCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHH
SAMPNAIIVVGKNLDILEINPAAEALFQCSASEVVGQRLLTLMPATNFLKVIQSGEMINT
HHCCCEEEEEECCCCEEEECHHHHHHHHCCHHHHHHHHHHHHHCHHHHHHHHHCCCEECC
TETYPLLGIVTHEIIFPVKGTDAVVGIFINITSEKKQREQYELIKSQTIQQAQDVIEKQM
CCCCCHHHHHHHHHEEECCCCCEEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHH
MVAQEIAGLLGEATAETKVQLGKLIKLMRQETL
HHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
GLIYTGAKCRDCYRCVRICNLKAIRMNTGHQGRFHAQVIDELCVHCGQCILACPQRAKR
CEEECCHHHHHHHHHHHHHCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHCC
PVSDLKEVKQLLAEGTPVIAVVAASFISALPLKKPDLLPTLLKKLGFIEVQETSIGAGMV
CHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCEEEECCCCCCCHH
TQEYLNMGFETPRLISYCPVIVNLIERYYPELITLLAPIVSPMIAQGRIIKSLNPYAKVV
HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCEEEE
YIGPCAAKRDEAQLLGLKDTIDYFLGFNELWDWIQDSVPLTEDLSPSAFDSFSPCQNRIY
EEECCCCCCCHHHHCCHHHHHHHHHCHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHCCEE
PVEGGVIWAVAEELRQAGEDFLTISGLDSCIEFVKHLSQGQITNPPKLMELWACKGGCIN
ECCCCCHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCC
GPLSLCLEESLFMRQRKLLEYYNSSGECVFVIDDYKLPEIPLKRDFVNRKVEQPYPSEAE
CHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCHHHHHHHHCCCCCCCHHH
IQGILARTGKLSAAQEFNCGNCGYNSCRDKAVAVYQGKAEVEMCIPYMRKRAESMSNRVI
HHHHHHHCCCCCCCCCCCCCCCCCCHHCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHH
SAMPNAIIVVGKNLDILEINPAAEALFQCSASEVVGQRLLTLMPATNFLKVIQSGEMINT
HHCCCEEEEEECCCCEEEECHHHHHHHHCCHHHHHHHHHHHHHCHHHHHHHHHCCCEECC
TETYPLLGIVTHEIIFPVKGTDAVVGIFINITSEKKQREQYELIKSQTIQQAQDVIEKQM
CCCCCHHHHHHHHHEEECCCCCEEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHH
MVAQEIAGLLGEATAETKVQLGKLIKLMRQETL
HHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 1911757; 9836629; 10529166 [H]