| Definition | Desulfotomaculum reducens MI-1 chromosome, complete genome. |
|---|---|
| Accession | NC_009253 |
| Length | 3,608,104 |
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The map label for this gene is 134299433
Identifier: 134299433
GI number: 134299433
Start: 1714350
End: 1715105
Strand: Reverse
Name: 134299433
Synonym: Dred_1576
Alternate gene names: NA
Gene position: 1715105-1714350 (Counterclockwise)
Preceding gene: 134299434
Following gene: 134299432
Centisome position: 47.53
GC content: 50.0
Gene sequence:
>756_bases ATGAATTTATTAATCGGATTGGCAGCAGGTTTTTTCGGAGGGCTTGTGGGCTTAGGCGGCGGCGTGATCATGATCCCCCT AATGGTCGGTATTTTGAAAATGAGTCAGCATCAGGCCCACGGCACAAGTCTTGTGGCACTTGTTTTTACTGGACTATCCG GGGCTGTCACTTATGCTTTAAATGGCTCGGTGGATATAGTGGCCTCTGCCCTTTTGGCGTCCACCGCAATATTTACCGCT AGGGCCGGGGCACGATTTGCCAATGCCCTGCCGGAATGGAAGCTTAAAAAATCTTTCGGTGGATTTTTAATTGTGGTCAC CCTGCTCCTACTTATTAAACCGTATCTGCCCCACGTTGCCGAGCCTGCCATGGGCTGGGTAAAAATCTTGATCCTTTTAC TGGCCGGGGGATTCACAGGCTTCCTTTCCGGGATGATGGGAGTCGGTGGCGGTACAATCATGGTTCCTTCCATGGTGCTG CTCATTGGCTTCACCCAGTACACCGCCCAGGGCTGTTCTCTCTTGGCCATGGTACCTGTGGGAATTGTTGGCGCTTATAC CCACTGGCGTTTAGGGAATGTCAGCACCAGTATTTTGCCGGGATTGATCCCAGGTATCCTGATAGGAACATTTCTGGGGG GGTCTCTGGCCCATATTTTATCTGAAGGAGCTTTGCGAATTATATTTGCTATCGTGATGATTCGGACAGGGGTTAAATAT TTAAAGACACCCAAGCCTCAACCTGATGTGGAGTAA
Upstream 100 bases:
>100_bases CACACCTTTGCCCATGTCCGCCGTGCAATAATATACTTAATTGAATCTAATCAACCTAAAAGTAGTGGGTTTACCCTTTT TGTTCGGGAGGTAACAGGAA
Downstream 100 bases:
>100_bases TATATTCGGGTAATAAAAAACGTATTTTAGCACGACCTGTTACAGGTCTTTCTTTTTGGGGGTATTTATGCATTATCTGA AAGGTTTTGTCATACCATTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 251; Mature: 251
Protein sequence:
>251_residues MNLLIGLAAGFFGGLVGLGGGVIMIPLMVGILKMSQHQAHGTSLVALVFTGLSGAVTYALNGSVDIVASALLASTAIFTA RAGARFANALPEWKLKKSFGGFLIVVTLLLLIKPYLPHVAEPAMGWVKILILLLAGGFTGFLSGMMGVGGGTIMVPSMVL LIGFTQYTAQGCSLLAMVPVGIVGAYTHWRLGNVSTSILPGLIPGILIGTFLGGSLAHILSEGALRIIFAIVMIRTGVKY LKTPKPQPDVE
Sequences:
>Translated_251_residues MNLLIGLAAGFFGGLVGLGGGVIMIPLMVGILKMSQHQAHGTSLVALVFTGLSGAVTYALNGSVDIVASALLASTAIFTA RAGARFANALPEWKLKKSFGGFLIVVTLLLLIKPYLPHVAEPAMGWVKILILLLAGGFTGFLSGMMGVGGGTIMVPSMVL LIGFTQYTAQGCSLLAMVPVGIVGAYTHWRLGNVSTSILPGLIPGILIGTFLGGSLAHILSEGALRIIFAIVMIRTGVKY LKTPKPQPDVE >Mature_251_residues MNLLIGLAAGFFGGLVGLGGGVIMIPLMVGILKMSQHQAHGTSLVALVFTGLSGAVTYALNGSVDIVASALLASTAIFTA RAGARFANALPEWKLKKSFGGFLIVVTLLLLIKPYLPHVAEPAMGWVKILILLLAGGFTGFLSGMMGVGGGTIMVPSMVL LIGFTQYTAQGCSLLAMVPVGIVGAYTHWRLGNVSTSILPGLIPGILIGTFLGGSLAHILSEGALRIIFAIVMIRTGVKY LKTPKPQPDVE
Specific function: Unknown
COG id: COG0730
COG function: function code R; Predicted permeases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25971; Mature: 25971
Theoretical pI: Translated: 10.41; Mature: 10.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 4.4 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 4.4 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNLLIGLAAGFFGGLVGLGGGVIMIPLMVGILKMSQHQAHGTSLVALVFTGLSGAVTYAL CCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCEEEEE NGSVDIVASALLASTAIFTARAGARFANALPEWKLKKSFGGFLIVVTLLLLIKPYLPHVA CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCHHHHHHHHHHHHHHHHHHHC EPAMGWVKILILLLAGGFTGFLSGMMGVGGGTIMVPSMVLLIGFTQYTAQGCSLLAMVPV CHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GIVGAYTHWRLGNVSTSILPGLIPGILIGTFLGGSLAHILSEGALRIIFAIVMIRTGVKY HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHH LKTPKPQPDVE HCCCCCCCCCC >Mature Secondary Structure MNLLIGLAAGFFGGLVGLGGGVIMIPLMVGILKMSQHQAHGTSLVALVFTGLSGAVTYAL CCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCEEEEE NGSVDIVASALLASTAIFTARAGARFANALPEWKLKKSFGGFLIVVTLLLLIKPYLPHVA CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCHHHHHHHHHHHHHHHHHHHC EPAMGWVKILILLLAGGFTGFLSGMMGVGGGTIMVPSMVLLIGFTQYTAQGCSLLAMVPV CHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GIVGAYTHWRLGNVSTSILPGLIPGILIGTFLGGSLAHILSEGALRIIFAIVMIRTGVKY HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHH LKTPKPQPDVE HCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA