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The map label for this gene is yibQ [H]

Identifier: 134299434

GI number: 134299434

Start: 1715365

End: 1716180

Strand: Reverse

Name: yibQ [H]

Synonym: Dred_1577

Alternate gene names: 134299434

Gene position: 1716180-1715365 (Counterclockwise)

Preceding gene: 134299435

Following gene: 134299433

Centisome position: 47.56

GC content: 42.89

Gene sequence:

>816_bases
ATGAAAAAACAGCAGCAATGGATAGTTATTATGTTCGGTATCTCCTTAATTTCTTTCCTGGGCTACTGGGGGATGGAAAA
GATTTCATCAGGCTCAACACAGACACTAAAAGTCGCCCAGCCAATGTTAGCCATTGTCATTGACGACTTTGGAGGTGCCG
ATACGCACGGCGTAGCTCAGTTTATGGAATTAAAGCAACCCATAACAGTAGCTGTAATGCCCAATCTGGTTAATTCCAAG
GAACACAGTGAAGAGGCCCACAAAAGAGGGCATGAGGTAATTTTGCACCAACCAATGGAACCACTGCATGGGAAGGACTC
CTGGCTGGGGCCCGGTGCAATAAAGTCTGATATGAGTTATGAGGAAATTAAAAAGGTATTTTTGGATAACCTAGCGACAG
TACCCCATGCAGAAGGTTTTAATAACCACACGGGTTCAAAAATAACCAGCAATAAAGATAAGGTTGCCCCTATGCTGGAA
GTTGCAAAAGACAAAGGTTTATTCGTTCTGGACAGCCGCACTTCCGATAAATCACAAGTTATCAAGGTAGCAAAATCCAT
GCAAGTTCCTTGGGTAAAAAGAGATGTATTTTTGGATGAAGTAAAATCAAAAGCAGTTATTACAAGGAATCTAAAGAAAG
CCTGTGCCATTGCTAAAAAGCAGGGATATGCCATATCCATCGGCCATGTGGGTCCTGGCGGAAATGTAACAGCCGAAGCA
GTTAAAGAAGCTCTACCCTTGATAGAAAAAGAGGGCGTTAAGCTGGTACCACTGTCCCAGGTTGTTAAACTGAAAAGTAA
CCGGGAGAAAGTTTAA

Upstream 100 bases:

>100_bases
ATTACTTAAAAATAAAAGACCAGCCCCAGTCAGGAAATATTAAGGTTCTTGACTACATTAAAAACCTTGTTGCAAATATT
CAAAAGAGGTGATCTCATCA

Downstream 100 bases:

>100_bases
GGGAGGTATGTACCTTCCTTAAACTTTCTCTCTTATAAGAGATTCCCTACTCCTTGGAACAAGGGTTGGTTTAATCCTTC
CCTTTTGTTTACTTTTAGGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 271; Mature: 271

Protein sequence:

>271_residues
MKKQQQWIVIMFGISLISFLGYWGMEKISSGSTQTLKVAQPMLAIVIDDFGGADTHGVAQFMELKQPITVAVMPNLVNSK
EHSEEAHKRGHEVILHQPMEPLHGKDSWLGPGAIKSDMSYEEIKKVFLDNLATVPHAEGFNNHTGSKITSNKDKVAPMLE
VAKDKGLFVLDSRTSDKSQVIKVAKSMQVPWVKRDVFLDEVKSKAVITRNLKKACAIAKKQGYAISIGHVGPGGNVTAEA
VKEALPLIEKEGVKLVPLSQVVKLKSNREKV

Sequences:

>Translated_271_residues
MKKQQQWIVIMFGISLISFLGYWGMEKISSGSTQTLKVAQPMLAIVIDDFGGADTHGVAQFMELKQPITVAVMPNLVNSK
EHSEEAHKRGHEVILHQPMEPLHGKDSWLGPGAIKSDMSYEEIKKVFLDNLATVPHAEGFNNHTGSKITSNKDKVAPMLE
VAKDKGLFVLDSRTSDKSQVIKVAKSMQVPWVKRDVFLDEVKSKAVITRNLKKACAIAKKQGYAISIGHVGPGGNVTAEA
VKEALPLIEKEGVKLVPLSQVVKLKSNREKV
>Mature_271_residues
MKKQQQWIVIMFGISLISFLGYWGMEKISSGSTQTLKVAQPMLAIVIDDFGGADTHGVAQFMELKQPITVAVMPNLVNSK
EHSEEAHKRGHEVILHQPMEPLHGKDSWLGPGAIKSDMSYEEIKKVFLDNLATVPHAEGFNNHTGSKITSNKDKVAPMLE
VAKDKGLFVLDSRTSDKSQVIKVAKSMQVPWVKRDVFLDEVKSKAVITRNLKKACAIAKKQGYAISIGHVGPGGNVTAEA
VKEALPLIEKEGVKLVPLSQVVKLKSNREKV

Specific function: Unknown

COG id: COG2861

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To H.influenzae HI_0755 [H]

Homologues:

Organism=Escherichia coli, GI87082298, Length=191, Percent_Identity=36.6492146596859, Blast_Score=129, Evalue=2e-31,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006837
- InterPro:   IPR011330
- InterPro:   IPR002509 [H]

Pfam domain/function: PF04748 Polysacc_deac_2 [H]

EC number: NA

Molecular weight: Translated: 29772; Mature: 29772

Theoretical pI: Translated: 10.03; Mature: 10.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKQQQWIVIMFGISLISFLGYWGMEKISSGSTQTLKVAQPMLAIVIDDFGGADTHGVAQ
CCCCCCEEEEHHHHHHHHHHHHHCHHHHCCCCCCCHHHHHHEEEEEEECCCCCCHHHHHH
FMELKQPITVAVMPNLVNSKEHSEEAHKRGHEVILHQPMEPLHGKDSWLGPGAIKSDMSY
HHHHCCCEEEEECCHHHCCHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCH
EEIKKVFLDNLATVPHAEGFNNHTGSKITSNKDKVAPMLEVAKDKGLFVLDSRTSDKSQV
HHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEECCCCCHHHH
IKVAKSMQVPWVKRDVFLDEVKSKAVITRNLKKACAIAKKQGYAISIGHVGPGGNVTAEA
HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCHHHH
VKEALPLIEKEGVKLVPLSQVVKLKSNREKV
HHHHHHHHHHCCCEEECHHHHHHHHCCCCCC
>Mature Secondary Structure
MKKQQQWIVIMFGISLISFLGYWGMEKISSGSTQTLKVAQPMLAIVIDDFGGADTHGVAQ
CCCCCCEEEEHHHHHHHHHHHHHCHHHHCCCCCCCHHHHHHEEEEEEECCCCCCHHHHHH
FMELKQPITVAVMPNLVNSKEHSEEAHKRGHEVILHQPMEPLHGKDSWLGPGAIKSDMSY
HHHHCCCEEEEECCHHHCCHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCH
EEIKKVFLDNLATVPHAEGFNNHTGSKITSNKDKVAPMLEVAKDKGLFVLDSRTSDKSQV
HHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEECCCCCHHHH
IKVAKSMQVPWVKRDVFLDEVKSKAVITRNLKKACAIAKKQGYAISIGHVGPGGNVTAEA
HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCHHHH
VKEALPLIEKEGVKLVPLSQVVKLKSNREKV
HHHHHHHHHHCCCEEECHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8041620; 9278503 [H]