| Definition | Desulfotomaculum reducens MI-1 chromosome, complete genome. |
|---|---|
| Accession | NC_009253 |
| Length | 3,608,104 |
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The map label for this gene is 134299400
Identifier: 134299400
GI number: 134299400
Start: 1673853
End: 1674968
Strand: Reverse
Name: 134299400
Synonym: Dred_1543
Alternate gene names: NA
Gene position: 1674968-1673853 (Counterclockwise)
Preceding gene: 134299401
Following gene: 134299399
Centisome position: 46.42
GC content: 44.44
Gene sequence:
>1116_bases ATGGCCGAAATCCTCATTGTTCAAGATATTTTACCATTATCCCTGGGCAGCATTCTGTTGGGTTCCGGCGGTGGTGGCAA TGCCTTTATTTTGAGTACAACCTTGGAGAATTACTTGGGAAAGCACAAGTCTCAAGTTGAAGTAATCCCCTACCATCAAT TGCCGGACAACTATACCGTTGCTTCCATTGGTTTACTTGGTTCCCCCGAACTAATGGAAGAAAACCTGCCGGATGGCAGC GAAGGAGAACGGGCCATTGAACTTCTGGAAAAAAATATTAACCGTAAAATCGATGCCCTCTTTGCTCTGGAAGGGGCTGG CATCAATATCCTCTATCCTGTACTGGTGGCCGCCAGAACCGGTATCCCTTTGGTTGACGGTGATGGCATGGGACGGGCTT TCCCGGAATTACAGATGACCACTTTCCACATCTACGGTCAACCCAGTACCCCTTCTGCCCTTACCAATTCGGAAGGCAAA GAGAATTTATTGTTTTATAAGGATCATTTTTTACATTACTACAATATTCGAAAAACTCTGGTGGAATATGGTGGCGTAGG ATACTTCGCCGGTCTTGCTATGAACGGACAAGAAATGAAAGAAGCCATCATTCCAGGCACCCTTTCCTTTGCCCTGGAAA TGGGCCAGGCATTAAAAAACAATCATTATCAAGAGGCTTTCTGGCGCCTGCAATATATTACCAAAAACTCCATTTATGGA CAAGCCATTGAACTCTTCATCGGCACCGTAGTAGAATTCGGTAACATTGCTACACTAAAGTTAAAATCCATTATTCTTAA GGGAATTAACCAATATCAGGACGATACCTTTCAAGTGCTGGTTGAAAACGAAAATGCATTTGCCTATCACAATGAAAAGA TGGTGGCCATGGTGCCGGACATTATTTCCTTTTTGGAATATCCCTCGGGGCAACCCATCAATAATAATGAGATTTACACC GGCAGGCAAATCGCTGTGATCGGTATTCCCTGTCCCAACCAACTGCGTACCAGAGAGGCCCTGGCAGTAATTGGTCCATC TACCTTTGGATATAAGACCCAGTACGAGCCCTTGGAGCAATTGCATCCAAATTATTATTTCAACAACGGGGTTTAA
Upstream 100 bases:
>100_bases GCATACTGATGGAAAGAAAAAGGCAGCGGCTGCTTTAGGAGTTAGTTTGGCCACCCTCTACCGTCGAATTAAAAAATATA AACTAAAGGAGTAAGCAAAG
Downstream 100 bases:
>100_bases GGTTATGAATTATTCCATTAGTTTTCTGATCGAAGAAAAACATATTTCTGGCCTGCTGGCCATGGAAGACCTTATAATAG CAACCACTAGGCTGGCCTAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 371; Mature: 370
Protein sequence:
>371_residues MAEILIVQDILPLSLGSILLGSGGGGNAFILSTTLENYLGKHKSQVEVIPYHQLPDNYTVASIGLLGSPELMEENLPDGS EGERAIELLEKNINRKIDALFALEGAGINILYPVLVAARTGIPLVDGDGMGRAFPELQMTTFHIYGQPSTPSALTNSEGK ENLLFYKDHFLHYYNIRKTLVEYGGVGYFAGLAMNGQEMKEAIIPGTLSFALEMGQALKNNHYQEAFWRLQYITKNSIYG QAIELFIGTVVEFGNIATLKLKSIILKGINQYQDDTFQVLVENENAFAYHNEKMVAMVPDIISFLEYPSGQPINNNEIYT GRQIAVIGIPCPNQLRTREALAVIGPSTFGYKTQYEPLEQLHPNYYFNNGV
Sequences:
>Translated_371_residues MAEILIVQDILPLSLGSILLGSGGGGNAFILSTTLENYLGKHKSQVEVIPYHQLPDNYTVASIGLLGSPELMEENLPDGS EGERAIELLEKNINRKIDALFALEGAGINILYPVLVAARTGIPLVDGDGMGRAFPELQMTTFHIYGQPSTPSALTNSEGK ENLLFYKDHFLHYYNIRKTLVEYGGVGYFAGLAMNGQEMKEAIIPGTLSFALEMGQALKNNHYQEAFWRLQYITKNSIYG QAIELFIGTVVEFGNIATLKLKSIILKGINQYQDDTFQVLVENENAFAYHNEKMVAMVPDIISFLEYPSGQPINNNEIYT GRQIAVIGIPCPNQLRTREALAVIGPSTFGYKTQYEPLEQLHPNYYFNNGV >Mature_370_residues AEILIVQDILPLSLGSILLGSGGGGNAFILSTTLENYLGKHKSQVEVIPYHQLPDNYTVASIGLLGSPELMEENLPDGSE GERAIELLEKNINRKIDALFALEGAGINILYPVLVAARTGIPLVDGDGMGRAFPELQMTTFHIYGQPSTPSALTNSEGKE NLLFYKDHFLHYYNIRKTLVEYGGVGYFAGLAMNGQEMKEAIIPGTLSFALEMGQALKNNHYQEAFWRLQYITKNSIYGQ AIELFIGTVVEFGNIATLKLKSIILKGINQYQDDTFQVLVENENAFAYHNEKMVAMVPDIISFLEYPSGQPINNNEIYTG RQIAVIGIPCPNQLRTREALAVIGPSTFGYKTQYEPLEQLHPNYYFNNGV
Specific function: Unknown
COG id: COG3535
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41112; Mature: 40980
Theoretical pI: Translated: 4.71; Mature: 4.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAEILIVQDILPLSLGSILLGSGGGGNAFILSTTLENYLGKHKSQVEVIPYHQLPDNYTV CCEEEEEHHHHHHCCCCEEEECCCCCCEEEEEEHHHHHHCCCCCCEEEEECCCCCCCCEE ASIGLLGSPELMEENLPDGSEGERAIELLEKNINRKIDALFALEGAGINILYPVLVAART EEEECCCCHHHHHCCCCCCCCHHHHHHHHHHHHCHHEEEEEEECCCCCCHHHHHHHHHHC GIPLVDGDGMGRAFPELQMTTFHIYGQPSTPSALTNSEGKENLLFYKDHFLHYYNIRKTL CCCEECCCCCCCCCCCEEEEEEEEEECCCCCCCCCCCCCCCCEEEEEHHHHHHHHHHHHH VEYGGVGYFAGLAMNGQEMKEAIIPGTLSFALEMGQALKNNHYQEAFWRLQYITKNSIYG HHHCCCCEEEEEECCHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHEEHHHHCCCHHH QAIELFIGTVVEFGNIATLKLKSIILKGINQYQDDTFQVLVENENAFAYHNEKMVAMVPD HHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHCCCCEEEEEEECCCEEEEECCEEEEHHHH IISFLEYPSGQPINNNEIYTGRQIAVIGIPCPNQLRTREALAVIGPSTFGYKTQYEPLEQ HHHHHCCCCCCCCCCCCEECCCEEEEEECCCCCHHHHHHEEEEECCCCCCCCCCCCHHHH LHPNYYFNNGV HCCCCEECCCC >Mature Secondary Structure AEILIVQDILPLSLGSILLGSGGGGNAFILSTTLENYLGKHKSQVEVIPYHQLPDNYTV CEEEEEHHHHHHCCCCEEEECCCCCCEEEEEEHHHHHHCCCCCCEEEEECCCCCCCCEE ASIGLLGSPELMEENLPDGSEGERAIELLEKNINRKIDALFALEGAGINILYPVLVAART EEEECCCCHHHHHCCCCCCCCHHHHHHHHHHHHCHHEEEEEEECCCCCCHHHHHHHHHHC GIPLVDGDGMGRAFPELQMTTFHIYGQPSTPSALTNSEGKENLLFYKDHFLHYYNIRKTL CCCEECCCCCCCCCCCEEEEEEEEEECCCCCCCCCCCCCCCCEEEEEHHHHHHHHHHHHH VEYGGVGYFAGLAMNGQEMKEAIIPGTLSFALEMGQALKNNHYQEAFWRLQYITKNSIYG HHHCCCCEEEEEECCHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHEEHHHHCCCHHH QAIELFIGTVVEFGNIATLKLKSIILKGINQYQDDTFQVLVENENAFAYHNEKMVAMVPD HHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHCCCCEEEEEEECCCEEEEECCEEEEHHHH IISFLEYPSGQPINNNEIYTGRQIAVIGIPCPNQLRTREALAVIGPSTFGYKTQYEPLEQ HHHHHCCCCCCCCCCCCEECCCEEEEEECCCCCHHHHHHEEEEECCCCCCCCCCCCHHHH LHPNYYFNNGV HCCCCEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA