Definition Desulfotomaculum reducens MI-1 chromosome, complete genome.
Accession NC_009253
Length 3,608,104

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The map label for this gene is 134299306

Identifier: 134299306

GI number: 134299306

Start: 1569964

End: 1571190

Strand: Reverse

Name: 134299306

Synonym: Dred_1447

Alternate gene names: NA

Gene position: 1571190-1569964 (Counterclockwise)

Preceding gene: 134299308

Following gene: 134299302

Centisome position: 43.55

GC content: 35.13

Gene sequence:

>1227_bases
ATGTTTGATTCAGTCAATTGGCTAGATAAAACCAATAACACCTCTATATCCTTCTCTGGGATGGCATCAATATCTCAAAA
ACCTCATGATTTATTTTTAAACTGTTTGCCTACCACTTGGGCTGTTAAGAAAAATACAAGTAAGCATTTAGACTATGACA
TTGATTTTTTCGATGGACAAACTCCAAAGGGTCTTCAGTTTTCTGTACGTCTTATCGTTCCAACTGCTCTGCAGTTAGAA
AATGAAAGGATCCTACTTCCATTTACTTCGGAAGAACTAAATTGGTCTATGGATGAAGCAAAGGTTCCTGTGTTTTTAAT
AATTGTAGATAGTAAAGATCAATCAATTTATTGGCTGTTTTTACAAGATTTTATTCAGGGAACCCTTGAGCATGAAAATC
CTGAGTGGCGCAGTCAAAATGTTGTTATCCTGCATGTTCCTACAGACCAGGAATTAACCAAGACTTTAGATAAATTTACT
AATACTTTATATTATGGATTAGAACTTTTATACATAAAACATTTTTATAAATTTTATTCTGTTACTAATAAACGTATCGC
TCAATTCTTTAATTCTCAGGAAGAAATACAAAGGGCTTTGGAACTTGAGTCAACTCGGCAATATAGTAATCCATCACCTT
CTTCAGAACAATCTTGTTGTAGCTCATCGAATGACGGCCACTGTGACACATGCAAAGGTAGCGATCCCTTCGACGATCTT
GTCTTTCAATCAACCAAAAAAATACAATCCCGTTTAGAATATGCACAAAGAATGAGAGTTTTAGATCCAAAGGAAAATCG
CATTGCTTATTATTGTATTAATCAAGCCTTGGCTGTATATGGTTCCACTGCAACTGTTGGAATCCGATATACAGCCCTTG
GTGAAATGGCCTTCTATGATTATTTGTTACATTTTTTAAAAACCTATGATGCTATAATCCCTAAAACAACAATTTTTTTT
ATAAACTCTGAAGAGCATCATCGTTATTTTAAAGCTATGGAGGAATTATCTCAAATCATCATTTCTGCTCTGGATCAAGG
TGAATTAATTGCTTCTAGTATGTTATTAATTCGACTGGCTGATGCTTACCTCTTTGCCACGCCCTATATTATGAAATACT
TAGGACAGGACATGGCCGCTCCGCTGATGGATTATGCACAAACATTATTGATGTTGTCCCATGAAATGGCCAGTCTAGTT
GAATCTCCAACCAGACTATTACAATAA

Upstream 100 bases:

>100_bases
TTTAAAATTATTCCTTTGAACCTTGTTTGTATGTGCTTGAAATTGTAAGAATGAGTGAGTAAATGAAAGAAAAATTTATT
TTATTGAGGGAGGTAAAAAT

Downstream 100 bases:

>100_bases
AAAAACAACCCAGTCATTAAAGGCTGGATTGTTCAATATACTAGATTTATTTTTTAACGTGTTTGGCAATCCATTCTTCT
TCGTCTAAAAACTCTAAGAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 408; Mature: 408

Protein sequence:

>408_residues
MFDSVNWLDKTNNTSISFSGMASISQKPHDLFLNCLPTTWAVKKNTSKHLDYDIDFFDGQTPKGLQFSVRLIVPTALQLE
NERILLPFTSEELNWSMDEAKVPVFLIIVDSKDQSIYWLFLQDFIQGTLEHENPEWRSQNVVILHVPTDQELTKTLDKFT
NTLYYGLELLYIKHFYKFYSVTNKRIAQFFNSQEEIQRALELESTRQYSNPSPSSEQSCCSSSNDGHCDTCKGSDPFDDL
VFQSTKKIQSRLEYAQRMRVLDPKENRIAYYCINQALAVYGSTATVGIRYTALGEMAFYDYLLHFLKTYDAIIPKTTIFF
INSEEHHRYFKAMEELSQIIISALDQGELIASSMLLIRLADAYLFATPYIMKYLGQDMAAPLMDYAQTLLMLSHEMASLV
ESPTRLLQ

Sequences:

>Translated_408_residues
MFDSVNWLDKTNNTSISFSGMASISQKPHDLFLNCLPTTWAVKKNTSKHLDYDIDFFDGQTPKGLQFSVRLIVPTALQLE
NERILLPFTSEELNWSMDEAKVPVFLIIVDSKDQSIYWLFLQDFIQGTLEHENPEWRSQNVVILHVPTDQELTKTLDKFT
NTLYYGLELLYIKHFYKFYSVTNKRIAQFFNSQEEIQRALELESTRQYSNPSPSSEQSCCSSSNDGHCDTCKGSDPFDDL
VFQSTKKIQSRLEYAQRMRVLDPKENRIAYYCINQALAVYGSTATVGIRYTALGEMAFYDYLLHFLKTYDAIIPKTTIFF
INSEEHHRYFKAMEELSQIIISALDQGELIASSMLLIRLADAYLFATPYIMKYLGQDMAAPLMDYAQTLLMLSHEMASLV
ESPTRLLQ
>Mature_408_residues
MFDSVNWLDKTNNTSISFSGMASISQKPHDLFLNCLPTTWAVKKNTSKHLDYDIDFFDGQTPKGLQFSVRLIVPTALQLE
NERILLPFTSEELNWSMDEAKVPVFLIIVDSKDQSIYWLFLQDFIQGTLEHENPEWRSQNVVILHVPTDQELTKTLDKFT
NTLYYGLELLYIKHFYKFYSVTNKRIAQFFNSQEEIQRALELESTRQYSNPSPSSEQSCCSSSNDGHCDTCKGSDPFDDL
VFQSTKKIQSRLEYAQRMRVLDPKENRIAYYCINQALAVYGSTATVGIRYTALGEMAFYDYLLHFLKTYDAIIPKTTIFF
INSEEHHRYFKAMEELSQIIISALDQGELIASSMLLIRLADAYLFATPYIMKYLGQDMAAPLMDYAQTLLMLSHEMASLV
ESPTRLLQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 47078; Mature: 47078

Theoretical pI: Translated: 4.94; Mature: 4.94

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFDSVNWLDKTNNTSISFSGMASISQKPHDLFLNCLPTTWAVKKNTSKHLDYDIDFFDGQ
CCCCCCCCCCCCCCEEEECCCHHCCCCCHHHHHCCCCCEEEEECCCCCCCCEEEEECCCC
TPKGLQFSVRLIVPTALQLENERILLPFTSEELNWSMDEAKVPVFLIIVDSKDQSIYWLF
CCCCCEEEEEEEECCEEEECCCEEEEEECCCCCCCCCCCCCCCEEEEEEECCCCCEEEHH
LQDFIQGTLEHENPEWRSQNVVILHVPTDQELTKTLDKFTNTLYYGLELLYIKHFYKFYS
HHHHHHHHHCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VTNKRIAQFFNSQEEIQRALELESTRQYSNPSPSSEQSCCSSSNDGHCDTCKGSDPFDDL
HHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCHHHH
VFQSTKKIQSRLEYAQRMRVLDPKENRIAYYCINQALAVYGSTATVGIRYTALGEMAFYD
HHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEHHHHHHHCCCEEEEEEEEHHHHHHHHH
YLLHFLKTYDAIIPKTTIFFINSEEHHRYFKAMEELSQIIISALDQGELIASSMLLIRLA
HHHHHHHHHHHHCCCEEEEEEECHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
DAYLFATPYIMKYLGQDMAAPLMDYAQTLLMLSHEMASLVESPTRLLQ
HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MFDSVNWLDKTNNTSISFSGMASISQKPHDLFLNCLPTTWAVKKNTSKHLDYDIDFFDGQ
CCCCCCCCCCCCCCEEEECCCHHCCCCCHHHHHCCCCCEEEEECCCCCCCCEEEEECCCC
TPKGLQFSVRLIVPTALQLENERILLPFTSEELNWSMDEAKVPVFLIIVDSKDQSIYWLF
CCCCCEEEEEEEECCEEEECCCEEEEEECCCCCCCCCCCCCCCEEEEEEECCCCCEEEHH
LQDFIQGTLEHENPEWRSQNVVILHVPTDQELTKTLDKFTNTLYYGLELLYIKHFYKFYS
HHHHHHHHHCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VTNKRIAQFFNSQEEIQRALELESTRQYSNPSPSSEQSCCSSSNDGHCDTCKGSDPFDDL
HHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCHHHH
VFQSTKKIQSRLEYAQRMRVLDPKENRIAYYCINQALAVYGSTATVGIRYTALGEMAFYD
HHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEHHHHHHHCCCEEEEEEEEHHHHHHHHH
YLLHFLKTYDAIIPKTTIFFINSEEHHRYFKAMEELSQIIISALDQGELIASSMLLIRLA
HHHHHHHHHHHHCCCEEEEEEECHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
DAYLFATPYIMKYLGQDMAAPLMDYAQTLLMLSHEMASLVESPTRLLQ
HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA