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The map label for this gene is yhbQ [C]

Identifier: 134299294

GI number: 134299294

Start: 1556348

End: 1556614

Strand: Reverse

Name: yhbQ [C]

Synonym: Dred_1435

Alternate gene names: 134299294

Gene position: 1556614-1556348 (Counterclockwise)

Preceding gene: 134299300

Following gene: 134299291

Centisome position: 43.14

GC content: 37.83

Gene sequence:

>267_bases
ATGGCTAATTGTTATGTGGTTTACATATTAAAATGTTCTGATAGCACTCTCTACACCGGGATCACCAACGATCTTAAAAG
GAGATTACAACAACATTTACTTGGCAAGGCCAGCAAATATACCCGTTGCCGCTTACCCGTACAGTTGGTTTATATAGAAG
GAGAATATACTAAGGGGCAAGCCTTAACCAGAGAATTAGCAATTAAAAAATTAAACCGGCAGCAAAAGATGGATCTCATT
GCAAATGCAGAACTAATTCCTTTCTAA

Upstream 100 bases:

>100_bases
GCTTTCGGAGGCTACAGCCCGTTTACTATGTTTTGGCTATCCTTTCCCATCTACCATCGCTATAATATAAGGTATTGAAA
AATGTAACAAGGGGTTAAAA

Downstream 100 bases:

>100_bases
ATACAAATGCTATTCCCCACATTGTTTAAGACAAACCCATGTCCAAAGGTTTCTTTCAGTTTTACCTGGGCCTGAAAACC
AGTACAATGGGAAACCGCCA

Product: excinuclease ABC subunit C

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 88; Mature: 87

Protein sequence:

>88_residues
MANCYVVYILKCSDSTLYTGITNDLKRRLQQHLLGKASKYTRCRLPVQLVYIEGEYTKGQALTRELAIKKLNRQQKMDLI
ANAELIPF

Sequences:

>Translated_88_residues
MANCYVVYILKCSDSTLYTGITNDLKRRLQQHLLGKASKYTRCRLPVQLVYIEGEYTKGQALTRELAIKKLNRQQKMDLI
ANAELIPF
>Mature_87_residues
ANCYVVYILKCSDSTLYTGITNDLKRRLQQHLLGKASKYTRCRLPVQLVYIEGEYTKGQALTRELAIKKLNRQQKMDLIA
NAELIPF

Specific function: Unknown

COG id: COG2827

COG function: function code L; Predicted endonuclease containing a URI domain

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0213 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000305 [H]

Pfam domain/function: PF01541 GIY-YIG [H]

EC number: NA

Molecular weight: Translated: 10166; Mature: 10035

Theoretical pI: Translated: 9.89; Mature: 9.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.4 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
3.4 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MANCYVVYILKCSDSTLYTGITNDLKRRLQQHLLGKASKYTRCRLPVQLVYIEGEYTKGQ
CCCEEEEEEEEECCCEEEECCHHHHHHHHHHHHCCCCCCCEEECCCEEEEEEECCCCCCH
ALTRELAIKKLNRQQKMDLIANAELIPF
HHHHHHHHHHHCHHHHHHHHCCCEECCC
>Mature Secondary Structure 
ANCYVVYILKCSDSTLYTGITNDLKRRLQQHLLGKASKYTRCRLPVQLVYIEGEYTKGQ
CCEEEEEEEEECCCEEEECCHHHHHHHHHHHHCCCCCCCEEECCCEEEEEEECCCCCCH
ALTRELAIKKLNRQQKMDLIANAELIPF
HHHHHHHHHHHCHHHHHHHHCCCEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11792842 [H]