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The map label for this gene is ydiF [H]

Identifier: 134299291

GI number: 134299291

Start: 1552865

End: 1554775

Strand: Reverse

Name: ydiF [H]

Synonym: Dred_1432

Alternate gene names: 134299291

Gene position: 1554775-1552865 (Counterclockwise)

Preceding gene: 134299294

Following gene: 134299290

Centisome position: 43.09

GC content: 41.44

Gene sequence:

>1911_bases
ATGATTTTACTACAAACAAACAATGTTTCTAAATATTTTGGTGTAAAACCAGTTCTAAAAAACATTAATATCTCCATTCA
GGAAAATGACAAAGTAGGCCTTGTAGGTGTCAATGGCGCCGGAAAGTCAACCCTATTGAAAGTCTTAAATAGCCAATTAT
GTCCGGATAGCGGTGAAGTTTTTAAATATGGTAGTTTAACCATTGGTTATTTAGCTCAGGACAGCGGGCTGGACTCCCAG
AGGTCTATTTATGATGAAATGCTTTCGGTTTTTCAACATCTCATGGATATGGAACAGCAACTCAGGAAACTTGAGGAGGC
TATGGGTAAAGTCCGCCATACGGATGATTCCACCTACCAGCAAATTATGGATCAATACGCTCACCTTTCCGATAACTTTC
GTGATCTAGGGGGGTACAGCTACCATTCATTAATTCGTGGAGTGCTGCAGGGACTTAATTTTCCAGAGGTGGACTACCAT
TCACCCATCTCTTTATTAAGTGGTGGTCAAAAAACACGTTTAGCTCTGGCAAAAAACCTTTTATCCAAACCGCATTTGCT
TATTCTTGACGAACCTACAAATTACCTAGATATACACTCTCTGTCCTGGCTGGAACAGCATTTACAATCATATACCGGTG
CTGTTCTGGTAGTGTCCCACGACCGTTATTTTCTGGATAAAGTGGTGGGACGAATAATTGAACTGGAGTTTGGCACTACC
ACAACCTACAAAACCAATTATTCCGGTTTTATTGACATTAAGTCCCAACAGCAGGAAACATTACTTAAGCAGTTTGAGCA
ACAACAAGAAGAAATCTCAAAGGCCAAAGATTTTATACAGCGCAATATTGTCCGGGCTTCTACCACCCGAAGGGCCCGCA
GTCGTTTAAAGTCTATGGAAAAAATGGAGTTAATTGAAGCTCCTGTAAAACAAAAACAAGTCTATTTTTCCTTTGATATT
CATCGACAGAGTGGTAAAAATGTCTTGCAGGTTTCCGATCTTGCGATTGGTTATCCCAATAACCAGTTAGCCAAGAATAT
TACCTTCTCCATTGAGCGGGGTGAAAGCGTAGCCCTCCTGGGTCCTAATGGTACAGGGAAGTCAACTCTATTAAAGACCA
TTATCGACCAGTTAACCCCCATAGCCGGTTCCATCCGAAAGGGTACTAATGTTAGTATTGGTTATTATGCCCAACAGCAG
GAAAAGCTTAACCCACAGAAAACAGTTCTGGATGAGCTTTGGGACGACTATCGTCTGATGGACGAGAAGGATGTCCGAAC
CATCCTGGGAAACTTCTTATTCCGGGATGATGATGTTTATAAGAGGGTAGAGGACCTCAGCGGCGGTGAGAAAGCCAGGC
TGTCTTTAGCAAAATTAATGCTAGAGAAGTCAAACTTTCTAATCTTAGATGAACCTACCAACCATCTGGATATTTTAAGT
CGTGAAGTTCTGGAAAGCGCGCTCATTGACTACCCCGGAACCATATTATTTGTTTCCCACGACCGTTACTTCCTTAACAA
AATGGCCAGTCGTATTATCGAGTTAACCCCCACAGGTGTTGAAACGGTTTTGGGAAACTACGACTATTACCTTGAAAAGA
AAACTGAACGGTCAGCGTTGCCAGATAAAAAAGAACTTACCCTTAAGAGCCAACCCGCAAAGCAAAGTTACCTAGAAAGT
AAGGAACAGCAAAGGTTGGAAAGAAAACGTTTAAGAAGAATTGAGGATTTGGAAAAATTAATTGCCGAAACCGAGGACGA
AATTGGCCAGATAGAAGGTAAACTGTCAGACCCAGCAATTTCTCAGGATTATACAGCTTGCCTAAAGCTTAGCCAAGAAC
TCAACGAAAAGAGAAGTAATATTGATACACTTCTGGAAGCATGGATGGCTCTAACTGAAGATACGGAATAA

Upstream 100 bases:

>100_bases
TTTTCTTTCAATGTAGCAGTATTTATTTTAACCTTATTATACTTCTTTCTTGTAACATCCTCCCAGTTGGGTTAAACTTT
TATATTGGAGGAGTTTGCAT

Downstream 100 bases:

>100_bases
ATACGACCACCCGAAGGGGTGGTTTTCTCTTTAAATATATTTAATACGTAAAACATTAATATTTTTGAAGGATATTTTTG
CTTTTTTGTAAAATATTTTC

Product: ABC transporter-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 636; Mature: 636

Protein sequence:

>636_residues
MILLQTNNVSKYFGVKPVLKNINISIQENDKVGLVGVNGAGKSTLLKVLNSQLCPDSGEVFKYGSLTIGYLAQDSGLDSQ
RSIYDEMLSVFQHLMDMEQQLRKLEEAMGKVRHTDDSTYQQIMDQYAHLSDNFRDLGGYSYHSLIRGVLQGLNFPEVDYH
SPISLLSGGQKTRLALAKNLLSKPHLLILDEPTNYLDIHSLSWLEQHLQSYTGAVLVVSHDRYFLDKVVGRIIELEFGTT
TTYKTNYSGFIDIKSQQQETLLKQFEQQQEEISKAKDFIQRNIVRASTTRRARSRLKSMEKMELIEAPVKQKQVYFSFDI
HRQSGKNVLQVSDLAIGYPNNQLAKNITFSIERGESVALLGPNGTGKSTLLKTIIDQLTPIAGSIRKGTNVSIGYYAQQQ
EKLNPQKTVLDELWDDYRLMDEKDVRTILGNFLFRDDDVYKRVEDLSGGEKARLSLAKLMLEKSNFLILDEPTNHLDILS
REVLESALIDYPGTILFVSHDRYFLNKMASRIIELTPTGVETVLGNYDYYLEKKTERSALPDKKELTLKSQPAKQSYLES
KEQQRLERKRLRRIEDLEKLIAETEDEIGQIEGKLSDPAISQDYTACLKLSQELNEKRSNIDTLLEAWMALTEDTE

Sequences:

>Translated_636_residues
MILLQTNNVSKYFGVKPVLKNINISIQENDKVGLVGVNGAGKSTLLKVLNSQLCPDSGEVFKYGSLTIGYLAQDSGLDSQ
RSIYDEMLSVFQHLMDMEQQLRKLEEAMGKVRHTDDSTYQQIMDQYAHLSDNFRDLGGYSYHSLIRGVLQGLNFPEVDYH
SPISLLSGGQKTRLALAKNLLSKPHLLILDEPTNYLDIHSLSWLEQHLQSYTGAVLVVSHDRYFLDKVVGRIIELEFGTT
TTYKTNYSGFIDIKSQQQETLLKQFEQQQEEISKAKDFIQRNIVRASTTRRARSRLKSMEKMELIEAPVKQKQVYFSFDI
HRQSGKNVLQVSDLAIGYPNNQLAKNITFSIERGESVALLGPNGTGKSTLLKTIIDQLTPIAGSIRKGTNVSIGYYAQQQ
EKLNPQKTVLDELWDDYRLMDEKDVRTILGNFLFRDDDVYKRVEDLSGGEKARLSLAKLMLEKSNFLILDEPTNHLDILS
REVLESALIDYPGTILFVSHDRYFLNKMASRIIELTPTGVETVLGNYDYYLEKKTERSALPDKKELTLKSQPAKQSYLES
KEQQRLERKRLRRIEDLEKLIAETEDEIGQIEGKLSDPAISQDYTACLKLSQELNEKRSNIDTLLEAWMALTEDTE
>Mature_636_residues
MILLQTNNVSKYFGVKPVLKNINISIQENDKVGLVGVNGAGKSTLLKVLNSQLCPDSGEVFKYGSLTIGYLAQDSGLDSQ
RSIYDEMLSVFQHLMDMEQQLRKLEEAMGKVRHTDDSTYQQIMDQYAHLSDNFRDLGGYSYHSLIRGVLQGLNFPEVDYH
SPISLLSGGQKTRLALAKNLLSKPHLLILDEPTNYLDIHSLSWLEQHLQSYTGAVLVVSHDRYFLDKVVGRIIELEFGTT
TTYKTNYSGFIDIKSQQQETLLKQFEQQQEEISKAKDFIQRNIVRASTTRRARSRLKSMEKMELIEAPVKQKQVYFSFDI
HRQSGKNVLQVSDLAIGYPNNQLAKNITFSIERGESVALLGPNGTGKSTLLKTIIDQLTPIAGSIRKGTNVSIGYYAQQQ
EKLNPQKTVLDELWDDYRLMDEKDVRTILGNFLFRDDDVYKRVEDLSGGEKARLSLAKLMLEKSNFLILDEPTNHLDILS
REVLESALIDYPGTILFVSHDRYFLNKMASRIIELTPTGVETVLGNYDYYLEKKTERSALPDKKELTLKSQPAKQSYLES
KEQQRLERKRLRRIEDLEKLIAETEDEIGQIEGKLSDPAISQDYTACLKLSQELNEKRSNIDTLLEAWMALTEDTE

Specific function: Unknown

COG id: COG0488

COG function: function code R; ATPase components of ABC transporters with duplicated ATPase domains

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 ABC transporter domains [H]

Homologues:

Organism=Homo sapiens, GI148612853, Length=535, Percent_Identity=31.588785046729, Blast_Score=235, Evalue=7e-62,
Organism=Homo sapiens, GI10947137, Length=513, Percent_Identity=29.8245614035088, Blast_Score=219, Evalue=5e-57,
Organism=Homo sapiens, GI27881506, Length=513, Percent_Identity=30.2144249512671, Blast_Score=219, Evalue=7e-57,
Organism=Homo sapiens, GI10947135, Length=534, Percent_Identity=32.3970037453184, Blast_Score=214, Evalue=2e-55,
Organism=Homo sapiens, GI69354671, Length=534, Percent_Identity=32.3970037453184, Blast_Score=213, Evalue=3e-55,
Organism=Homo sapiens, GI90421313, Length=175, Percent_Identity=29.1428571428571, Blast_Score=71, Evalue=2e-12,
Organism=Homo sapiens, GI66529005, Length=175, Percent_Identity=29.7142857142857, Blast_Score=68, Evalue=2e-11,
Organism=Escherichia coli, GI1787041, Length=535, Percent_Identity=36.4485981308411, Blast_Score=346, Evalue=3e-96,
Organism=Escherichia coli, GI1789751, Length=656, Percent_Identity=32.3170731707317, Blast_Score=310, Evalue=2e-85,
Organism=Escherichia coli, GI2367384, Length=522, Percent_Identity=33.7164750957854, Blast_Score=298, Evalue=7e-82,
Organism=Escherichia coli, GI1787182, Length=639, Percent_Identity=30.3599374021909, Blast_Score=271, Evalue=1e-73,
Organism=Escherichia coli, GI1788506, Length=568, Percent_Identity=23.7676056338028, Blast_Score=94, Evalue=3e-20,
Organism=Escherichia coli, GI1787029, Length=241, Percent_Identity=31.1203319502075, Blast_Score=90, Evalue=5e-19,
Organism=Escherichia coli, GI1786698, Length=230, Percent_Identity=29.1304347826087, Blast_Score=77, Evalue=4e-15,
Organism=Escherichia coli, GI1788165, Length=194, Percent_Identity=28.3505154639175, Blast_Score=73, Evalue=5e-14,
Organism=Escherichia coli, GI1790739, Length=169, Percent_Identity=29.585798816568, Blast_Score=72, Evalue=8e-14,
Organism=Escherichia coli, GI1787164, Length=196, Percent_Identity=28.5714285714286, Blast_Score=70, Evalue=4e-13,
Organism=Escherichia coli, GI1789672, Length=241, Percent_Identity=25.3112033195021, Blast_Score=70, Evalue=5e-13,
Organism=Escherichia coli, GI1786803, Length=212, Percent_Identity=29.2452830188679, Blast_Score=69, Evalue=6e-13,
Organism=Escherichia coli, GI48994997, Length=255, Percent_Identity=25.4901960784314, Blast_Score=69, Evalue=1e-12,
Organism=Escherichia coli, GI1786563, Length=203, Percent_Identity=28.0788177339901, Blast_Score=67, Evalue=4e-12,
Organism=Escherichia coli, GI1787758, Length=212, Percent_Identity=25.9433962264151, Blast_Score=65, Evalue=1e-11,
Organism=Caenorhabditis elegans, GI17559834, Length=537, Percent_Identity=29.0502793296089, Blast_Score=230, Evalue=2e-60,
Organism=Caenorhabditis elegans, GI17555318, Length=519, Percent_Identity=30.4431599229287, Blast_Score=218, Evalue=7e-57,
Organism=Caenorhabditis elegans, GI17553372, Length=538, Percent_Identity=30.4832713754647, Blast_Score=213, Evalue=4e-55,
Organism=Caenorhabditis elegans, GI17532409, Length=190, Percent_Identity=26.8421052631579, Blast_Score=67, Evalue=3e-11,
Organism=Saccharomyces cerevisiae, GI6320874, Length=519, Percent_Identity=31.4065510597302, Blast_Score=236, Evalue=6e-63,
Organism=Saccharomyces cerevisiae, GI6321121, Length=529, Percent_Identity=28.9224952741021, Blast_Score=233, Evalue=5e-62,
Organism=Saccharomyces cerevisiae, GI6325030, Length=287, Percent_Identity=30.6620209059233, Blast_Score=116, Evalue=1e-26,
Organism=Saccharomyces cerevisiae, GI6324314, Length=392, Percent_Identity=26.530612244898, Blast_Score=116, Evalue=1e-26,
Organism=Saccharomyces cerevisiae, GI6323278, Length=389, Percent_Identity=25.1928020565553, Blast_Score=107, Evalue=4e-24,
Organism=Saccharomyces cerevisiae, GI6324985, Length=178, Percent_Identity=29.2134831460674, Blast_Score=71, Evalue=6e-13,
Organism=Drosophila melanogaster, GI24666836, Length=533, Percent_Identity=31.5196998123827, Blast_Score=244, Evalue=1e-64,
Organism=Drosophila melanogaster, GI24641342, Length=525, Percent_Identity=30.8571428571429, Blast_Score=238, Evalue=8e-63,
Organism=Drosophila melanogaster, GI24642252, Length=518, Percent_Identity=31.0810810810811, Blast_Score=234, Evalue=1e-61,
Organism=Drosophila melanogaster, GI18859989, Length=518, Percent_Identity=31.0810810810811, Blast_Score=234, Evalue=1e-61,
Organism=Drosophila melanogaster, GI221500365, Length=256, Percent_Identity=27.34375, Blast_Score=76, Evalue=7e-14,
Organism=Drosophila melanogaster, GI116007184, Length=256, Percent_Identity=27.34375, Blast_Score=76, Evalue=8e-14,
Organism=Drosophila melanogaster, GI28574259, Length=199, Percent_Identity=28.1407035175879, Blast_Score=75, Evalue=1e-13,
Organism=Drosophila melanogaster, GI24648279, Length=272, Percent_Identity=25.3676470588235, Blast_Score=75, Evalue=1e-13,
Organism=Drosophila melanogaster, GI161078426, Length=269, Percent_Identity=25.2788104089219, Blast_Score=74, Evalue=3e-13,
Organism=Drosophila melanogaster, GI28571209, Length=175, Percent_Identity=29.1428571428571, Blast_Score=67, Evalue=4e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003439
- InterPro:   IPR017871
- InterPro:   IPR003593 [H]

Pfam domain/function: PF00005 ABC_tran [H]

EC number: NA

Molecular weight: Translated: 72510; Mature: 72510

Theoretical pI: Translated: 5.86; Mature: 5.86

Prosite motif: PS00211 ABC_TRANSPORTER_1 ; PS50893 ABC_TRANSPORTER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MILLQTNNVSKYFGVKPVLKNINISIQENDKVGLVGVNGAGKSTLLKVLNSQLCPDSGEV
CEEEEECCCHHHHCCHHHHHCCEEEEECCCCEEEEEECCCCHHHHHHHHHHHCCCCCCCE
FKYGSLTIGYLAQDSGLDSQRSIYDEMLSVFQHLMDMEQQLRKLEEAMGKVRHTDDSTYQ
EEECCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH
QIMDQYAHLSDNFRDLGGYSYHSLIRGVLQGLNFPEVDYHSPISLLSGGQKTRLALAKNL
HHHHHHHHHCCCHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHCCCCHHHHHHHHHH
LSKPHLLILDEPTNYLDIHSLSWLEQHLQSYTGAVLVVSHDRYFLDKVVGRIIELEFGTT
HCCCCEEEEECCCCEEEHHHHHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHEEEECCCC
TTYKTNYSGFIDIKSQQQETLLKQFEQQQEEISKAKDFIQRNIVRASTTRRARSRLKSME
EEEECCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KMELIEAPVKQKQVYFSFDIHRQSGKNVLQVSDLAIGYPNNQLAKNITFSIERGESVALL
HHHHHHCCHHHCEEEEEEEEECCCCCCEEEEECEEEECCCCHHHCCCEEEEECCCEEEEE
GPNGTGKSTLLKTIIDQLTPIAGSIRKGTNVSIGYYAQQQEKLNPQKTVLDELWDDYRLM
CCCCCCHHHHHHHHHHHHCCHHHHCCCCCCCEEEEEECHHHHCCHHHHHHHHHHHHHHHC
DEKDVRTILGNFLFRDDDVYKRVEDLSGGEKARLSLAKLMLEKSNFLILDEPTNHLDILS
CHHHHHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHHHHHHCCCEEEEECCCCHHHHHH
REVLESALIDYPGTILFVSHDRYFLNKMASRIIELTPTGVETVLGNYDYYLEKKTERSAL
HHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHCCCCCCHHHHHCCCHHEEECCHHHCCC
PDKKELTLKSQPAKQSYLESKEQQRLERKRLRRIEDLEKLIAETEDEIGQIEGKLSDPAI
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHCCCCCCCCC
SQDYTACLKLSQELNEKRSNIDTLLEAWMALTEDTE
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MILLQTNNVSKYFGVKPVLKNINISIQENDKVGLVGVNGAGKSTLLKVLNSQLCPDSGEV
CEEEEECCCHHHHCCHHHHHCCEEEEECCCCEEEEEECCCCHHHHHHHHHHHCCCCCCCE
FKYGSLTIGYLAQDSGLDSQRSIYDEMLSVFQHLMDMEQQLRKLEEAMGKVRHTDDSTYQ
EEECCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH
QIMDQYAHLSDNFRDLGGYSYHSLIRGVLQGLNFPEVDYHSPISLLSGGQKTRLALAKNL
HHHHHHHHHCCCHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHCCCCHHHHHHHHHH
LSKPHLLILDEPTNYLDIHSLSWLEQHLQSYTGAVLVVSHDRYFLDKVVGRIIELEFGTT
HCCCCEEEEECCCCEEEHHHHHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHEEEECCCC
TTYKTNYSGFIDIKSQQQETLLKQFEQQQEEISKAKDFIQRNIVRASTTRRARSRLKSME
EEEECCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KMELIEAPVKQKQVYFSFDIHRQSGKNVLQVSDLAIGYPNNQLAKNITFSIERGESVALL
HHHHHHCCHHHCEEEEEEEEECCCCCCEEEEECEEEECCCCHHHCCCEEEEECCCEEEEE
GPNGTGKSTLLKTIIDQLTPIAGSIRKGTNVSIGYYAQQQEKLNPQKTVLDELWDDYRLM
CCCCCCHHHHHHHHHHHHCCHHHHCCCCCCCEEEEEECHHHHCCHHHHHHHHHHHHHHHC
DEKDVRTILGNFLFRDDDVYKRVEDLSGGEKARLSLAKLMLEKSNFLILDEPTNHLDILS
CHHHHHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHHHHHHCCCEEEEECCCCHHHHHH
REVLESALIDYPGTILFVSHDRYFLNKMASRIIELTPTGVETVLGNYDYYLEKKTERSAL
HHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHCCCCCCHHHHHCCCHHEEECCHHHCCC
PDKKELTLKSQPAKQSYLESKEQQRLERKRLRRIEDLEKLIAETEDEIGQIEGKLSDPAI
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHCCCCCCCCC
SQDYTACLKLSQELNEKRSNIDTLLEAWMALTEDTE
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9202461; 9384377 [H]