| Definition | Desulfotomaculum reducens MI-1 chromosome, complete genome. |
|---|---|
| Accession | NC_009253 |
| Length | 3,608,104 |
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The map label for this gene is 134299249
Identifier: 134299249
GI number: 134299249
Start: 1497675
End: 1498439
Strand: Reverse
Name: 134299249
Synonym: Dred_1390
Alternate gene names: NA
Gene position: 1498439-1497675 (Counterclockwise)
Preceding gene: 134299250
Following gene: 134299248
Centisome position: 41.53
GC content: 40.0
Gene sequence:
>765_bases ATGAGTTATTGTTGTCCACCCCATAAACCTTCTAAAAAAATAGTAACCGGCGGAACCCAACCAACCTGTGTTAGTACTTC TGTCCCCATTGAAGCACTATATGGCCCTTTAACCTCAAAAATACCGGTAGTTGTTGCTGAAACAACGCTGCAAATAGATG TTAATTCAACCATCACTCTTCCTGAGCGCGCATTAGAAATAAAGGGTTGTAAAAAAAGGGTAAAAGTTACTCAGTGTATG TTATTGCAAGCTCCCGGTCAAACCAGCGGTCCTATAACTCTTTGTGTTAAGGGATTTATTCGTAATAATATAGATTATTC TAATCGTCTTTGCTCTAATACCGAAGGAGTTTGCGGGGATATTCGCCATTGTACTGTTGACGTTCCCTTTAGCTGTAATA CACCTATCGAAATTAATGGTACTTACCCACTTCCCCCCATGCCAAATACATCGGAAGAATTTGAATACTTCCGGAGAGAA AAGTTGAAGGGTCATGGCTTCGCAGAGAAAGATGAGTTACTTTCCGGTGATCTGTCAGAGTTTAACCAGGTTAGCGAAGA ATTCTATAATGAACTTCCCTTCTGTGAATTAGTCAGTGCAAGAATCGTCCAGTATGATGAATACCTCAATCGTAGACACC CAAAGGGCGTAACTCTACCCTTTGAAGAAAAAGAATTTAGGCAATTTGAGCAAAAAATGGTTCTATACCTTACTCTTAAA ATACTACAGAAACGCCAGGTGCAAATTCCCCCAAGTATCTACTAA
Upstream 100 bases:
>100_bases GGAAATTGTGATACATTATGGATTTTTTTCCAGAATAAGTAACACAACACTGGTAGATTGAATAACATGCAGTAAAATTA TAAAAGGAGGATTGAGAAAT
Downstream 100 bases:
>100_bases AGATATAAATGTAATTAAATACCTTTTCTTATGGTACAGGTCTAAAACACTCGATATTTAGGTTTCGAGTGTTTTTTTAG TCTTAAAACGTCACCTATTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 254; Mature: 253
Protein sequence:
>254_residues MSYCCPPHKPSKKIVTGGTQPTCVSTSVPIEALYGPLTSKIPVVVAETTLQIDVNSTITLPERALEIKGCKKRVKVTQCM LLQAPGQTSGPITLCVKGFIRNNIDYSNRLCSNTEGVCGDIRHCTVDVPFSCNTPIEINGTYPLPPMPNTSEEFEYFRRE KLKGHGFAEKDELLSGDLSEFNQVSEEFYNELPFCELVSARIVQYDEYLNRRHPKGVTLPFEEKEFRQFEQKMVLYLTLK ILQKRQVQIPPSIY
Sequences:
>Translated_254_residues MSYCCPPHKPSKKIVTGGTQPTCVSTSVPIEALYGPLTSKIPVVVAETTLQIDVNSTITLPERALEIKGCKKRVKVTQCM LLQAPGQTSGPITLCVKGFIRNNIDYSNRLCSNTEGVCGDIRHCTVDVPFSCNTPIEINGTYPLPPMPNTSEEFEYFRRE KLKGHGFAEKDELLSGDLSEFNQVSEEFYNELPFCELVSARIVQYDEYLNRRHPKGVTLPFEEKEFRQFEQKMVLYLTLK ILQKRQVQIPPSIY >Mature_253_residues SYCCPPHKPSKKIVTGGTQPTCVSTSVPIEALYGPLTSKIPVVVAETTLQIDVNSTITLPERALEIKGCKKRVKVTQCML LQAPGQTSGPITLCVKGFIRNNIDYSNRLCSNTEGVCGDIRHCTVDVPFSCNTPIEINGTYPLPPMPNTSEEFEYFRREK LKGHGFAEKDELLSGDLSEFNQVSEEFYNELPFCELVSARIVQYDEYLNRRHPKGVTLPFEEKEFRQFEQKMVLYLTLKI LQKRQVQIPPSIY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28731; Mature: 28600
Theoretical pI: Translated: 7.24; Mature: 7.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.3 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 5.9 %Cys+Met (Translated Protein) 4.3 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSYCCPPHKPSKKIVTGGTQPTCVSTSVPIEALYGPLTSKIPVVVAETTLQIDVNSTITL CCCCCCCCCCCCCEEECCCCCCEEECCCCHHHHHCCCCCCCCEEEEEEEEEEECCCEEEC PERALEIKGCKKRVKVTQCMLLQAPGQTSGPITLCVKGFIRNNIDYSNRLCSNTEGVCGD HHHHHHHHHHHHHHHHHHHHEEECCCCCCCCHHHHHHHHHHCCCCHHHHHCCCCCCCCCC IRHCTVDVPFSCNTPIEINGTYPLPPMPNTSEEFEYFRREKLKGHGFAEKDELLSGDLSE CEEEEEECCCCCCCCEEECCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHCCCHHH FNQVSEEFYNELPFCELVSARIVQYDEYLNRRHPKGVTLPFEEKEFRQFEQKMVLYLTLK HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHH ILQKRQVQIPPSIY HHHHHCCCCCCCCC >Mature Secondary Structure SYCCPPHKPSKKIVTGGTQPTCVSTSVPIEALYGPLTSKIPVVVAETTLQIDVNSTITL CCCCCCCCCCCCEEECCCCCCEEECCCCHHHHHCCCCCCCCEEEEEEEEEEECCCEEEC PERALEIKGCKKRVKVTQCMLLQAPGQTSGPITLCVKGFIRNNIDYSNRLCSNTEGVCGD HHHHHHHHHHHHHHHHHHHHEEECCCCCCCCHHHHHHHHHHCCCCHHHHHCCCCCCCCCC IRHCTVDVPFSCNTPIEINGTYPLPPMPNTSEEFEYFRREKLKGHGFAEKDELLSGDLSE CEEEEEECCCCCCCCEEECCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHCCCHHH FNQVSEEFYNELPFCELVSARIVQYDEYLNRRHPKGVTLPFEEKEFRQFEQKMVLYLTLK HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHH ILQKRQVQIPPSIY HHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA