Click here to switch to the map view.

The map label for this gene is fliY [H]

Identifier: 134299236

GI number: 134299236

Start: 1480046

End: 1480879

Strand: Reverse

Name: fliY [H]

Synonym: Dred_1377

Alternate gene names: 134299236

Gene position: 1480879-1480046 (Counterclockwise)

Preceding gene: 134299238

Following gene: 134299235

Centisome position: 41.04

GC content: 41.49

Gene sequence:

>834_bases
GTGAAAAAGAGAGGTTTGTGGTTTTTGGTTTTGGTTCTTACCTTAGCTCTGGTGACTATGGGATGTGGCGGCGGAGAAAA
AGAAAAACAAGCCGCTAATCAAGAACCCGCAAAGCAGACTGAGAAAAATACCTTGGATCAAATCAAAGAAAAAGGTGTAA
TTGTTGCTGGTTTGGATGACACCTTCGCACCTATGGGCTACCGTGACGAAAGCAATAAATTGGTTGGTTTTGATATTGAC
ATGGGCGAAGAAATGGCTAAACGTTTGGGTGTTAAAATTCAGTGGCAGCCCACCCAGTGGGACGGTATCATTATGGCTTT
AGACTCTAAGCGTTTTGACATAATTTTATCCGGTATGACTGTTACCGAAGAACGTAAAAAGTCCATTAATTTCTCTGTTC
CCTATGTTGGGGATGGCCAGATTATGGTAGTTAAGAAAGGTACCACTGGTTTTAATACAGCAGCAGATTTAAAGGGTAAG
GTAGTAGGAACCCAGGCTGGTAGTTCCGGTGAAGAAGCTGTTAAGAAAGTTGAAGGGATTAAAGAAGTTAAACTATATAA
AACCTATCCCGAAGCCTTTACCGATCTGCAAATCGGTCGTATTCCCGTGGTTGTCTGTGACCGCATCACCGCCAGTCACT
ACATCAGCAAGCGTGCTGATACCTACGAAATCGTAGGAGAAAAAATCACAGACGAACCTCTGGCAATTGGTCTTCGTAAA
TCCGATCCAGAGTTAAAAGAAGCTATAGATAACGTACTGAACGAAATGAAAAAGGATGGAACCTTAACTAAAATTTCTAT
GAAGTGGTTTAACAGAGATATTACCGTTAAGTAA

Upstream 100 bases:

>100_bases
CTTATATATTTATTTATATCATATCTATTGACCTTTGCACTTTAGTTAGTTAAAATATCAAAGTAGTAGATATTTAATAC
ATAACGGGAGGGGAAGTCAC

Downstream 100 bases:

>100_bases
GAATAATAAAAAACTGGTTAGGTTGGTGACAACATGCACGTAGGCCCATTGGACATAAATTTTATCATAAAAATTCTACC
CAATTTATTATTGGGAGCTG

Product: extracellular solute-binding protein

Products: NA

Alternate protein names: CBP; Protein fliY; Sulfate starvation-induced protein 7; SSI7 [H]

Number of amino acids: Translated: 277; Mature: 277

Protein sequence:

>277_residues
MKKRGLWFLVLVLTLALVTMGCGGGEKEKQAANQEPAKQTEKNTLDQIKEKGVIVAGLDDTFAPMGYRDESNKLVGFDID
MGEEMAKRLGVKIQWQPTQWDGIIMALDSKRFDIILSGMTVTEERKKSINFSVPYVGDGQIMVVKKGTTGFNTAADLKGK
VVGTQAGSSGEEAVKKVEGIKEVKLYKTYPEAFTDLQIGRIPVVVCDRITASHYISKRADTYEIVGEKITDEPLAIGLRK
SDPELKEAIDNVLNEMKKDGTLTKISMKWFNRDITVK

Sequences:

>Translated_277_residues
MKKRGLWFLVLVLTLALVTMGCGGGEKEKQAANQEPAKQTEKNTLDQIKEKGVIVAGLDDTFAPMGYRDESNKLVGFDID
MGEEMAKRLGVKIQWQPTQWDGIIMALDSKRFDIILSGMTVTEERKKSINFSVPYVGDGQIMVVKKGTTGFNTAADLKGK
VVGTQAGSSGEEAVKKVEGIKEVKLYKTYPEAFTDLQIGRIPVVVCDRITASHYISKRADTYEIVGEKITDEPLAIGLRK
SDPELKEAIDNVLNEMKKDGTLTKISMKWFNRDITVK
>Mature_277_residues
MKKRGLWFLVLVLTLALVTMGCGGGEKEKQAANQEPAKQTEKNTLDQIKEKGVIVAGLDDTFAPMGYRDESNKLVGFDID
MGEEMAKRLGVKIQWQPTQWDGIIMALDSKRFDIILSGMTVTEERKKSINFSVPYVGDGQIMVVKKGTTGFNTAADLKGK
VVGTQAGSSGEEAVKKVEGIKEVKLYKTYPEAFTDLQIGRIPVVVCDRITASHYISKRADTYEIVGEKITDEPLAIGLRK
SDPELKEAIDNVLNEMKKDGTLTKISMKWFNRDITVK

Specific function: Part of a binding-protein-dependent transport system for cystine [H]

COG id: COG0834

COG function: function code ET; ABC-type amino acid transport/signal transduction systems, periplasmic component/domain

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 3 family [H]

Homologues:

Organism=Escherichia coli, GI1788228, Length=233, Percent_Identity=39.0557939914163, Blast_Score=190, Evalue=1e-49,
Organism=Escherichia coli, GI1788649, Length=228, Percent_Identity=32.0175438596491, Blast_Score=124, Evalue=5e-30,
Organism=Escherichia coli, GI1787085, Length=267, Percent_Identity=29.5880149812734, Blast_Score=124, Evalue=5e-30,
Organism=Escherichia coli, GI1788648, Length=230, Percent_Identity=32.6086956521739, Blast_Score=119, Evalue=2e-28,
Organism=Escherichia coli, GI1787031, Length=218, Percent_Identity=29.3577981651376, Blast_Score=117, Evalue=1e-27,
Organism=Escherichia coli, GI1787088, Length=217, Percent_Identity=29.4930875576037, Blast_Score=111, Evalue=4e-26,
Organism=Escherichia coli, GI1786876, Length=248, Percent_Identity=27.8225806451613, Blast_Score=84, Evalue=1e-17,

Paralogues:

None

Copy number: 1920 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 1060 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 80 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015683
- InterPro:   IPR001638
- InterPro:   IPR018313 [H]

Pfam domain/function: PF00497 SBP_bac_3 [H]

EC number: NA

Molecular weight: Translated: 30699; Mature: 30699

Theoretical pI: Translated: 8.60; Mature: 8.60

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS01039 SBP_BACTERIAL_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKRGLWFLVLVLTLALVTMGCGGGEKEKQAANQEPAKQTEKNTLDQIKEKGVIVAGLDD
CCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHCCEEEEECCC
TFAPMGYRDESNKLVGFDIDMGEEMAKRLGVKIQWQPTQWDGIIMALDSKRFDIILSGMT
CCCCCCCCCCCCCEEEEECCCCHHHHHHCCCEEEEECCCCCCEEEEECCCCEEEEEECCE
VTEERKKSINFSVPYVGDGQIMVVKKGTTGFNTAADLKGKVVGTQAGSSGEEAVKKVEGI
ECHHHHHCCCEECCEECCCEEEEEECCCCCCCCHHCCCCEEEECCCCCCHHHHHHHHHCH
KEVKLYKTYPEAFTDLQIGRIPVVVCDRITASHYISKRADTYEIVGEKITDEPLAIGLRK
HHHHEEECCCHHHCCCCCCCEEEEEECHHHHHHHHHHCCCHHHHHCCCCCCCCEEEEECC
SDPELKEAIDNVLNEMKKDGTLTKISMKWFNRDITVK
CCHHHHHHHHHHHHHHHCCCCEEEEEEEHHCCCEECC
>Mature Secondary Structure
MKKRGLWFLVLVLTLALVTMGCGGGEKEKQAANQEPAKQTEKNTLDQIKEKGVIVAGLDD
CCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHCCEEEEECCC
TFAPMGYRDESNKLVGFDIDMGEEMAKRLGVKIQWQPTQWDGIIMALDSKRFDIILSGMT
CCCCCCCCCCCCCEEEEECCCCHHHHHHCCCEEEEECCCCCCEEEEECCCCEEEEEECCE
VTEERKKSINFSVPYVGDGQIMVVKKGTTGFNTAADLKGKVVGTQAGSSGEEAVKKVEGI
ECHHHHHCCCEECCEECCCEEEEEECCCCCCCCHHCCCCEEEECCCCCCHHHHHHHHHCH
KEVKLYKTYPEAFTDLQIGRIPVVVCDRITASHYISKRADTYEIVGEKITDEPLAIGLRK
HHHHEEECCCHHHCCCCCCCEEEEEECHHHHHHHHHHCCCHHHHHCCCCCCCCEEEEECC
SDPELKEAIDNVLNEMKKDGTLTKISMKWFNRDITVK
CCHHHHHHHHHHHHHHHCCCCEEEEEEEHHCCCEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]