Click here to switch to the map view.

The map label for this gene is 134298781

Identifier: 134298781

GI number: 134298781

Start: 977127

End: 977474

Strand: Reverse

Name: 134298781

Synonym: Dred_0916

Alternate gene names: NA

Gene position: 977474-977127 (Counterclockwise)

Preceding gene: 134298806

Following gene: 134298780

Centisome position: 27.09

GC content: 33.91

Gene sequence:

>348_bases
ATGTCATTTGGTAATAGGCTTAAGTCTTTAAGGGAAAAGAATAATATATCTAGAGAAGAACTTGCTAAATTGTTAGATTT
ATCTTACTGGGCAATTAGTAAATATGAGAATAACGAAAGAATTCCAGATCATGAAACAATTAATAAAATTGCTGATTATT
TTATAGTAACCATAGACTACCTCCTCGGTCGATCTGATAACCCCAGCCCCTCTCCAAAATCAACTATTGATGAAGAATGG
CCGGGGGTAGCTAATATACTACGTAGAAATGGCAAAAAACTTACTCCAGCGGATAAAAAAAGAATTGAAAAAATTATAAA
GGCTGCCGTTGAAGATACTGACGATTGA

Upstream 100 bases:

>100_bases
GACGATTTGTCCATTGTCAATATTTATTTGCCCATTTAGTCCAAATCATTTATAAGATTGGACAATATGTGCTAAACTAC
AAATAGAAAGGGGGGTAAAT

Downstream 100 bases:

>100_bases
TGAGGTGATGATCTACGGGATGCCGACATCGAGACGACCCACCCAAATAAGGGCTGAGTATGCAAAGGAACAAGCTCTTA
TATTTTTAAGAGAAATGGGT

Product: XRE family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator XRE Family; Helix-Turn-Helix Domain Protein; Transcriptional Regulator; Transcriptional Repressor Of PBSX Genes; Phage-Related Transcriptional Regulator Cro/CI Family; Transcriptional Regulator Cro/CI Family; Transcriptional Regulator Xre Family; Prophage; Phage Element Protein

Number of amino acids: Translated: 115; Mature: 114

Protein sequence:

>115_residues
MSFGNRLKSLREKNNISREELAKLLDLSYWAISKYENNERIPDHETINKIADYFIVTIDYLLGRSDNPSPSPKSTIDEEW
PGVANILRRNGKKLTPADKKRIEKIIKAAVEDTDD

Sequences:

>Translated_115_residues
MSFGNRLKSLREKNNISREELAKLLDLSYWAISKYENNERIPDHETINKIADYFIVTIDYLLGRSDNPSPSPKSTIDEEW
PGVANILRRNGKKLTPADKKRIEKIIKAAVEDTDD
>Mature_114_residues
SFGNRLKSLREKNNISREELAKLLDLSYWAISKYENNERIPDHETINKIADYFIVTIDYLLGRSDNPSPSPKSTIDEEWP
GVANILRRNGKKLTPADKKRIEKIIKAAVEDTDD

Specific function: Unknown

COG id: COG1396

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13247; Mature: 13116

Theoretical pI: Translated: 7.52; Mature: 7.52

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
0.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSFGNRLKSLREKNNISREELAKLLDLSYWAISKYENNERIPDHETINKIADYFIVTIDY
CCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHH
LLGRSDNPSPSPKSTIDEEWPGVANILRRNGKKLTPADKKRIEKIIKAAVEDTDD
HHCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
SFGNRLKSLREKNNISREELAKLLDLSYWAISKYENNERIPDHETINKIADYFIVTIDY
CHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHH
LLGRSDNPSPSPKSTIDEEWPGVANILRRNGKKLTPADKKRIEKIIKAAVEDTDD
HHCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA