| Definition | Desulfotomaculum reducens MI-1 chromosome, complete genome. |
|---|---|
| Accession | NC_009253 |
| Length | 3,608,104 |
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The map label for this gene is 134298780
Identifier: 134298780
GI number: 134298780
Start: 976082
End: 977107
Strand: Reverse
Name: 134298780
Synonym: Dred_0915
Alternate gene names: NA
Gene position: 977107-976082 (Counterclockwise)
Preceding gene: 134298781
Following gene: 134298779
Centisome position: 27.08
GC content: 35.28
Gene sequence:
>1026_bases ATGCCGACATCGAGACGACCCACCCAAATAAGGGCTGAGTATGCAAAGGAACAAGCTCTTATATTTTTAAGAGAAATGGG TGTTGACAATCCTCCTGTACCAGTTAAGCAGTTAATTAAAAAACTTGGTAAGTTATTCCTTTTTGATAGTAAAATGAATC CGGAGTTTGCAGAAGATAAGGGTTTTTCTTGCACCTCAGAAACCGGTTATAATATCTACATAAACCGGGATCTTCCTAGT GGGATGGATAACTTTACCTATGGCCATGAAATGGCTCACATTGTATTAAATCATCATTTAGAATTTGATGTAGAATATTT AACCGATAAAGAGTTATGGATATTAGACAGGGAAGCGGATATTTTTTCAGCAAATTTACTTATGCAAGAAAGCTGGTTTC GTTCAAGTATAAAATTCCCCTTAACGGTACCGGAAATTGGAAGATTGAAAAACTTGTATGATGTATCGTGGGATGCCTTG AGTAATCGTTTTGACGAACTAGGTATTTATGCTAAAGAGGGGATAAATAATCTTTTTACTGAATGGAAAAGAAAGAAAGA AATTTCCTGCAATTTTACAACCATAAACATTCATTCGGTAGATGGTATTTCATACGATAATGAAATGATTATTGAAAGCT TTCACTACAAGTCAACTGAGGAGATAACGATAGAGAGGTGTTTTAATATGTCAGAACCTTTTCTATTTCCTGAAATTGAT GAAAATATGAGGTTTCTTAAATGTCCCGCCTGTGGAAATAGTGTATTTTCACCTTGTGCGAGCTTTTGTAAAAAATGTGG ACACTATTTATATAATATTTGTACTAACGTACAAAGTGACCCAAGGGAATTAAATAATTTGTGCGGGGATAAAAACGTCC CCGATGCCCTATATTGCGAATACTGTGGGTGTATTACGGCTATTGGGCAATACATACAAAGGTTAGAAAACGAAAGAAAA AGACAAATCGAACCTGAAGATACTGAAGATGAAGTTCTTCTGGGAAATTACCACACAAGATTTTAG
Upstream 100 bases:
>100_bases AATGGCAAAAAACTTACTCCAGCGGATAAAAAAAGAATTGAAAAAATTATAAAGGCTGCCGTTGAAGATACTGACGATTG ATGAGGTGATGATCTACGGG
Downstream 100 bases:
>100_bases AAACACTACAAAAGTAGTGGTTTTTGTGTTTTATGAGGTATTTCGACAGAATGCAATATTATTCTACTTTAAGATGCATT TTGATGGGATGTACTCTAAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 341; Mature: 340
Protein sequence:
>341_residues MPTSRRPTQIRAEYAKEQALIFLREMGVDNPPVPVKQLIKKLGKLFLFDSKMNPEFAEDKGFSCTSETGYNIYINRDLPS GMDNFTYGHEMAHIVLNHHLEFDVEYLTDKELWILDREADIFSANLLMQESWFRSSIKFPLTVPEIGRLKNLYDVSWDAL SNRFDELGIYAKEGINNLFTEWKRKKEISCNFTTINIHSVDGISYDNEMIIESFHYKSTEEITIERCFNMSEPFLFPEID ENMRFLKCPACGNSVFSPCASFCKKCGHYLYNICTNVQSDPRELNNLCGDKNVPDALYCEYCGCITAIGQYIQRLENERK RQIEPEDTEDEVLLGNYHTRF
Sequences:
>Translated_341_residues MPTSRRPTQIRAEYAKEQALIFLREMGVDNPPVPVKQLIKKLGKLFLFDSKMNPEFAEDKGFSCTSETGYNIYINRDLPS GMDNFTYGHEMAHIVLNHHLEFDVEYLTDKELWILDREADIFSANLLMQESWFRSSIKFPLTVPEIGRLKNLYDVSWDAL SNRFDELGIYAKEGINNLFTEWKRKKEISCNFTTINIHSVDGISYDNEMIIESFHYKSTEEITIERCFNMSEPFLFPEID ENMRFLKCPACGNSVFSPCASFCKKCGHYLYNICTNVQSDPRELNNLCGDKNVPDALYCEYCGCITAIGQYIQRLENERK RQIEPEDTEDEVLLGNYHTRF >Mature_340_residues PTSRRPTQIRAEYAKEQALIFLREMGVDNPPVPVKQLIKKLGKLFLFDSKMNPEFAEDKGFSCTSETGYNIYINRDLPSG MDNFTYGHEMAHIVLNHHLEFDVEYLTDKELWILDREADIFSANLLMQESWFRSSIKFPLTVPEIGRLKNLYDVSWDALS NRFDELGIYAKEGINNLFTEWKRKKEISCNFTTINIHSVDGISYDNEMIIESFHYKSTEEITIERCFNMSEPFLFPEIDE NMRFLKCPACGNSVFSPCASFCKKCGHYLYNICTNVQSDPRELNNLCGDKNVPDALYCEYCGCITAIGQYIQRLENERKR QIEPEDTEDEVLLGNYHTRF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39715; Mature: 39584
Theoretical pI: Translated: 4.78; Mature: 4.78
Prosite motif: PS00142 ZINC_PROTEASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.8 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 6.5 %Cys+Met (Translated Protein) 3.8 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 6.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPTSRRPTQIRAEYAKEQALIFLREMGVDNPPVPVKQLIKKLGKLFLFDSKMNPEFAEDK CCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHEEECCCCCCCCCCCC GFSCTSETGYNIYINRDLPSGMDNFTYGHEMAHIVLNHHLEFDVEYLTDKELWILDREAD CCCCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHCCCEEEEEEECCCEEEEEECCCC IFSANLLMQESWFRSSIKFPLTVPEIGRLKNLYDVSWDALSNRFDELGIYAKEGINNLFT HHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHCCHHHHHHHHHHH EWKRKKEISCNFTTINIHSVDGISYDNEMIIESFHYKSTEEITIERCFNMSEPFLFPEID HHHHHCCCEEEEEEEEEEECCCCCCCCHHHHHHHCCCCCHHHHHHHHCCCCCCCCCCCCC ENMRFLKCPACGNSVFSPCASFCKKCGHYLYNICTNVQSDPRELNNLCGDKNVPDALYCE CCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCHHHHHH YCGCITAIGQYIQRLENERKRQIEPEDTEDEVLLGNYHTRF HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCCCC >Mature Secondary Structure PTSRRPTQIRAEYAKEQALIFLREMGVDNPPVPVKQLIKKLGKLFLFDSKMNPEFAEDK CCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHEEECCCCCCCCCCCC GFSCTSETGYNIYINRDLPSGMDNFTYGHEMAHIVLNHHLEFDVEYLTDKELWILDREAD CCCCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHCCCEEEEEEECCCEEEEEECCCC IFSANLLMQESWFRSSIKFPLTVPEIGRLKNLYDVSWDALSNRFDELGIYAKEGINNLFT HHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHCCHHHHHHHHHHH EWKRKKEISCNFTTINIHSVDGISYDNEMIIESFHYKSTEEITIERCFNMSEPFLFPEID HHHHHCCCEEEEEEEEEEECCCCCCCCHHHHHHHCCCCCHHHHHHHHCCCCCCCCCCCCC ENMRFLKCPACGNSVFSPCASFCKKCGHYLYNICTNVQSDPRELNNLCGDKNVPDALYCE CCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCHHHHHH YCGCITAIGQYIQRLENERKRQIEPEDTEDEVLLGNYHTRF HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA