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The map label for this gene is cisA [H]

Identifier: 134298778

GI number: 134298778

Start: 972871

End: 974535

Strand: Reverse

Name: cisA [H]

Synonym: Dred_0913

Alternate gene names: 134298778

Gene position: 974535-972871 (Counterclockwise)

Preceding gene: 134298779

Following gene: 134298777

Centisome position: 27.01

GC content: 38.38

Gene sequence:

>1665_bases
TTGAAAGCAGCTATCTATTCAAGAAAAAGTAAATTCACCGGCAAGGGTGAATCGATAGAAAACCAAATCCAGTTGTGTAA
GGAATACGCTTTTAATCATTTTAGTATTAACGAAAATGATGTACTTATCTATGAGGATGAGGGCTTTTCGGGGGGGACTA
CGGACAGGCCCCAGTTTCAATTGATGCTTAAAGATGCAAAAAACAAGAAGTTTAGCACACTTATTTGTTACCGCCTGGAC
CGTCTCAGCAGAAGTGTGGTTGATTTTTCTTCAACTATGGAAGAGTTACAGCAATATAACATAAGTTTTGTATCGATACG
TGAGCAGTTTGACACTAGTACCCCCATGGGAAGGGCTATGATGTATATAGCCAGTGTATTCGCCCAGTTGGAGCGAGAAA
CGGCAGCAGAGCGTATCCGTGACAATATGTTACAGCTTGCAAAGACCGGTCGTTGGCTAGGTGGTATAACTCCTACTGGT
TTCGAGAGTGAACCTGTTGTCTACATAGACCCAGCTGGAAAAGAAAGAAAAATGTATAGACTCTCCCCAATCGCTGAAGA
ATTTGAAATGGTAAAATTGATATTTGATAAGTATTTAGAACTTAAATCCCTTACAAAACTTGAACAATTTTGCATTATGA
ATAACTTTAAAAGCAAGAACGATGTGGATTTTAAAAGGTACTCCCTCCGGTTCATGTTGTCCAATCCTGTTTATGCCATA
GCAGATAAAGAAATGTATAACTTTCTTCTTGAAAACAGCTATGAGGTTTACTGCGATGAGAACGAATTTACCGGTGAATT
TGGAGTTATGGCATACAATAAGACCCAACAAGATAAGAAAAACCCTTCTTGTAGGTATAGAGACGTTTCTGAGTGGATCG
TAGCCGTAGGTGCCCATAAGGGCATCATACCGAGCGCTACTTGGATAAAGGCACAAAAATTACTCCTGCAAAATAAGTCA
AAATCATATAGAAAGGTTAGAAACTCTTCTTGTTTACTTTCGGGACTACTTAAGTGTAGAAACTGCGGAAGCTATATGAG
GCCAAAGGTTAGTAGGCCAAATAAAGATGGGGAAATTACATATTACTACATGTGTGAAATGAAAGAGCGTAGTAAAAGAA
CCCGGTGCGATGTAAAGAACGTCCAAGGAAATAATCTTGATAAAGCAGTCGTCCAGGAAATAAAAAAATTATCCATGTCT
GACTCTGAACTGTACACTACCATTCAGAATGATAAATTTACAATTCAAGCAGCTCAAAACACCGTCGAAAATGAAATTGC
TCTAATTGATGGGAAAATCAAAGCCAATGAGCAAGCCATAAATAACCTGGTTACTTCCCTATCCCAAGGACAAAACTCTA
CTGCAAGCAAGTACATCATCACCCAAATTGAAGAATTAGATAAACAGACCGCTGAATTAAAAGGAAGATTGTTAAAACTA
AAAGAGGTCGAGGAAAATAACCAATCGAAAGAGCAAAACCTAGATGTGATGAAAAGCATCCTCTCGGCTTTCAGTAAAAA
CATAGATACCGTAGATATCGATGCTAAACGAATGTTTATCAAAAGCATAGTAGAGAATATCGTCTGGGACGGCGAAAATG
TTGAAATGAACCTATTTGGAGCCAATTCAGAAAAAAAGCAATTGCCGCCAACGGAAACAATTTAA

Upstream 100 bases:

>100_bases
CTTCCGGCACCAAACCCCGTATAATCGTTTTTGGGCTGGATCTTCAATGGATATTATATAATAAAAGTGTTCTCTAACTA
TAGGGGTTGGTGGTGTCAAA

Downstream 100 bases:

>100_bases
TGTTTCCGTTGTGGAGGTATAGAAAATGAAATATTGATGCATCTGCGTTTTATAAAGAAAGTTAAGGCAGAGGTTTCATT
GTATGACCCCATTGGTGTGG

Product: resolvase domain-containing protein

Products: NA

Alternate protein names: Stage IV sporulation protein CA [H]

Number of amino acids: Translated: 554; Mature: 554

Protein sequence:

>554_residues
MKAAIYSRKSKFTGKGESIENQIQLCKEYAFNHFSINENDVLIYEDEGFSGGTTDRPQFQLMLKDAKNKKFSTLICYRLD
RLSRSVVDFSSTMEELQQYNISFVSIREQFDTSTPMGRAMMYIASVFAQLERETAAERIRDNMLQLAKTGRWLGGITPTG
FESEPVVYIDPAGKERKMYRLSPIAEEFEMVKLIFDKYLELKSLTKLEQFCIMNNFKSKNDVDFKRYSLRFMLSNPVYAI
ADKEMYNFLLENSYEVYCDENEFTGEFGVMAYNKTQQDKKNPSCRYRDVSEWIVAVGAHKGIIPSATWIKAQKLLLQNKS
KSYRKVRNSSCLLSGLLKCRNCGSYMRPKVSRPNKDGEITYYYMCEMKERSKRTRCDVKNVQGNNLDKAVVQEIKKLSMS
DSELYTTIQNDKFTIQAAQNTVENEIALIDGKIKANEQAINNLVTSLSQGQNSTASKYIITQIEELDKQTAELKGRLLKL
KEVEENNQSKEQNLDVMKSILSAFSKNIDTVDIDAKRMFIKSIVENIVWDGENVEMNLFGANSEKKQLPPTETI

Sequences:

>Translated_554_residues
MKAAIYSRKSKFTGKGESIENQIQLCKEYAFNHFSINENDVLIYEDEGFSGGTTDRPQFQLMLKDAKNKKFSTLICYRLD
RLSRSVVDFSSTMEELQQYNISFVSIREQFDTSTPMGRAMMYIASVFAQLERETAAERIRDNMLQLAKTGRWLGGITPTG
FESEPVVYIDPAGKERKMYRLSPIAEEFEMVKLIFDKYLELKSLTKLEQFCIMNNFKSKNDVDFKRYSLRFMLSNPVYAI
ADKEMYNFLLENSYEVYCDENEFTGEFGVMAYNKTQQDKKNPSCRYRDVSEWIVAVGAHKGIIPSATWIKAQKLLLQNKS
KSYRKVRNSSCLLSGLLKCRNCGSYMRPKVSRPNKDGEITYYYMCEMKERSKRTRCDVKNVQGNNLDKAVVQEIKKLSMS
DSELYTTIQNDKFTIQAAQNTVENEIALIDGKIKANEQAINNLVTSLSQGQNSTASKYIITQIEELDKQTAELKGRLLKL
KEVEENNQSKEQNLDVMKSILSAFSKNIDTVDIDAKRMFIKSIVENIVWDGENVEMNLFGANSEKKQLPPTETI
>Mature_554_residues
MKAAIYSRKSKFTGKGESIENQIQLCKEYAFNHFSINENDVLIYEDEGFSGGTTDRPQFQLMLKDAKNKKFSTLICYRLD
RLSRSVVDFSSTMEELQQYNISFVSIREQFDTSTPMGRAMMYIASVFAQLERETAAERIRDNMLQLAKTGRWLGGITPTG
FESEPVVYIDPAGKERKMYRLSPIAEEFEMVKLIFDKYLELKSLTKLEQFCIMNNFKSKNDVDFKRYSLRFMLSNPVYAI
ADKEMYNFLLENSYEVYCDENEFTGEFGVMAYNKTQQDKKNPSCRYRDVSEWIVAVGAHKGIIPSATWIKAQKLLLQNKS
KSYRKVRNSSCLLSGLLKCRNCGSYMRPKVSRPNKDGEITYYYMCEMKERSKRTRCDVKNVQGNNLDKAVVQEIKKLSMS
DSELYTTIQNDKFTIQAAQNTVENEIALIDGKIKANEQAINNLVTSLSQGQNSTASKYIITQIEELDKQTAELKGRLLKL
KEVEENNQSKEQNLDVMKSILSAFSKNIDTVDIDAKRMFIKSIVENIVWDGENVEMNLFGANSEKKQLPPTETI

Specific function: Putative site-specific recombinase having a very important role in sporulation. It probably plays a role in the recombination of spoIIIC and spoIVCB to form sigma K factor [H]

COG id: COG1961

COG function: function code L; Site-specific recombinases, DNA invertase Pin homologs

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 recombinase domain [H]

Homologues:

Organism=Escherichia coli, GI1787404, Length=117, Percent_Identity=35.8974358974359, Blast_Score=75, Evalue=1e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011109
- InterPro:   IPR006118
- InterPro:   IPR006119 [H]

Pfam domain/function: PF07508 Recombinase; PF00239 Resolvase [H]

EC number: NA

Molecular weight: Translated: 63743; Mature: 63743

Theoretical pI: Translated: 8.34; Mature: 8.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKAAIYSRKSKFTGKGESIENQIQLCKEYAFNHFSINENDVLIYEDEGFSGGTTDRPQFQ
CCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCCCCCCHHE
LMLKDAKNKKFSTLICYRLDRLSRSVVDFSSTMEELQQYNISFVSIREQFDTSTPMGRAM
EEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHCCCCCHHHHH
MYIASVFAQLERETAAERIRDNMLQLAKTGRWLGGITPTGFESEPVVYIDPAGKERKMYR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEECCCCCCCCEEE
LSPIAEEFEMVKLIFDKYLELKSLTKLEQFCIMNNFKSKNDVDFKRYSLRFMLSNPVYAI
ECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHEEEEEEECCCEEEE
ADKEMYNFLLENSYEVYCDENEFTGEFGVMAYNKTQQDKKNPSCRYRDVSEWIVAVGAHK
ECHHHHHHHHCCCEEEEECCCCCCCCEEEEEECCCCCCCCCCCCCCCCHHHHHHHHCCCC
GIIPSATWIKAQKLLLQNKSKSYRKVRNSSCLLSGLLKCRNCGSYMRPKVSRPNKDGEIT
CCCCCHHHHHHHHHHHHCCCHHHHHHHCCHHHHHHHHHHHCCCHHCCCCCCCCCCCCCEE
YYYMCEMKERSKRTRCDVKNVQGNNLDKAVVQEIKKLSMSDSELYTTIQNDKFTIQAAQN
EEEEEECHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCCCHHEEEECCCEEEEEEHHH
TVENEIALIDGKIKANEQAINNLVTSLSQGQNSTASKYIITQIEELDKQTAELKGRLLKL
CCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
KEVEENNQSKEQNLDVMKSILSAFSKNIDTVDIDAKRMFIKSIVENIVWDGENVEMNLFG
HHHHCCCCHHHHHHHHHHHHHHHHHCCCCEEECHHHHHHHHHHHHHHHCCCCCEEEEEEC
ANSEKKQLPPTETI
CCCCCCCCCCCCCC
>Mature Secondary Structure
MKAAIYSRKSKFTGKGESIENQIQLCKEYAFNHFSINENDVLIYEDEGFSGGTTDRPQFQ
CCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCCCCCCHHE
LMLKDAKNKKFSTLICYRLDRLSRSVVDFSSTMEELQQYNISFVSIREQFDTSTPMGRAM
EEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHCCCCCHHHHH
MYIASVFAQLERETAAERIRDNMLQLAKTGRWLGGITPTGFESEPVVYIDPAGKERKMYR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEECCCCCCCCEEE
LSPIAEEFEMVKLIFDKYLELKSLTKLEQFCIMNNFKSKNDVDFKRYSLRFMLSNPVYAI
ECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHEEEEEEECCCEEEE
ADKEMYNFLLENSYEVYCDENEFTGEFGVMAYNKTQQDKKNPSCRYRDVSEWIVAVGAHK
ECHHHHHHHHCCCEEEEECCCCCCCCEEEEEECCCCCCCCCCCCCCCCHHHHHHHHCCCC
GIIPSATWIKAQKLLLQNKSKSYRKVRNSSCLLSGLLKCRNCGSYMRPKVSRPNKDGEIT
CCCCCHHHHHHHHHHHHCCCHHHHHHHCCHHHHHHHHHHHCCCHHCCCCCCCCCCCCCEE
YYYMCEMKERSKRTRCDVKNVQGNNLDKAVVQEIKKLSMSDSELYTTIQNDKFTIQAAQN
EEEEEECHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCCCHHEEEECCCEEEEEEHHH
TVENEIALIDGKIKANEQAINNLVTSLSQGQNSTASKYIITQIEELDKQTAELKGRLLKL
CCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
KEVEENNQSKEQNLDVMKSILSAFSKNIDTVDIDAKRMFIKSIVENIVWDGENVEMNLFG
HHHHCCCCHHHHHHHHHHHHHHHHHCCCCEEECHHHHHHHHHHHHHHHCCCCCEEEEEEC
ANSEKKQLPPTETI
CCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 2105293; 7704261; 8969508; 9384377 [H]